Rickettsia australis: MC5_01790
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Entry
MC5_01790 CDS
T01783
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rau
Rickettsia australis
Pathway
rau03030
DNA replication
rau03430
Mismatch repair
rau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MC5_01790 (dnaE)
03430 Mismatch repair
MC5_01790 (dnaE)
03440 Homologous recombination
MC5_01790 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rau03032
]
MC5_01790 (dnaE)
03400 DNA repair and recombination proteins [BR:
rau03400
]
MC5_01790 (dnaE)
Enzymes [BR:
rau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MC5_01790 (dnaE)
DNA replication proteins [BR:
rau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MC5_01790 (dnaE)
DNA repair and recombination proteins [BR:
rau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MC5_01790 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFC70750
UniProt:
H8K9N0
LinkDB
All DBs
Position
333758..337315
Genome browser
AA seq
1185 aa
AA seq
DB search
MQPEFIHLRTQSSYSFLESALTLEKIVELASSNKMPAICLADKGNLFGSLEFALYAVKKG
LQPIHGVILNIKYDVDIFAQILLIAKDETGYKNLLKLSSLTFTKNDRKICDHITFEDLIE
YQEGLIALCCYTEGIVGQCLLAREQEQAMLFARTLQEILGDRFYFEIMRHDLPEEQFIED
SYIKIASELSIPLVATNKVLFSEKSMHDAHDVLLCISAGVTKDYPDRKTVSENCYFRSPH
EMRELFSDLPNAIQNTVNLRERCYFAAHANPPMLPNFATKDISETDLIRKDAKEGLLARL
ATKFKSENISLENQEELKTEYFARLNYELDIICNMNFAGYFLIVSDFIKWSKKEGILVGP
GRGSGAGSVVAWSLLITDLDPIKFGLLFERFLNPERISMPDFDIDFCQERREEVINYVRS
KYGNNRVGQIITFGKMQAKAVIKDVARVLSLPYKFADYLTELVPFSAVNPVTLEQAMREV
PELANAAKGNGLYNLEGEAELIKLVLDTSLILEGLHRHSSTHAAGIVIAGTDLVDIVPVY
KDANSDMLVVGYSMKYSEIAGLIKFDFLGLQTLTVITDCKKLLKEQGIEVDFNNMTFDDN
KTYQMLCKGKGVGVFQFESIGMKDALRRLKPDSIHDLIALGALYRPGPMENISTYIACKH
KLQQPDYLHELLKPILEETYGVVIYQEQVQRIAQILAGYTLGAADLLRRAMGKKIKKEME
EQEEIFVKGAIANNISESQAKSIFATVAKFAGYGFNKAHAAAYGVISYQTAYLKANYSAE
FLVACLNLELNNHDKINLFLQEVKDSGIKIIAPNINISEGYFTTCHFGSALCHPRVGKDP
EKTSEMKMGSRFCGNDIEGTGYDKEESAIIFALGAIKGVTPNFGKLVTDERNARGAFKSI
TDFIERLPPKSINSKLLENLIKSGCFDELHDNRLQLFLSISKLLAYSTSYHEEQESNQFS
LIKVSSLSSTILVSSDYADKNTLAFYEFESMGLFISNHPLTEYKGIFSRLNILNTADLHN
NLPEGTHRVNLAGVIQKKDSRMSARGRFVTLVLSDPENIFELSIFSEEVLKDYVHLLEVK
SLVVVNCDIVKNEGGIKLTAKSFSSIEDAINNKQFELQLYPKNYEELEQIVTLLAARTNN
GDQSNAKATIYLQSEDVKNFVAKITLSEKFFLQGQDFEILKGYSK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgaatttattcatttaagaactcaaagctcttattcttttctagaaagtgca
ttaacgcttgagaagatagtagaacttgcttcatcgaataaaatgcctgctatttgtttg
gcagataagggaaatttatttggctcgttagaatttgcattatacgcagtaaaaaaagga
ctacagccgatacatggagttattctaaatataaaatatgatgtagatatttttgctcaa
attttgcttatagctaaagatgaaaccggttataaaaatttactcaaactatcaagcctt
actttcactaaaaatgatcgtaagatatgtgatcatattacttttgaagatttaatcgaa
tatcaagaagggctaatagcattatgttgttatactgagggtattgtcggacaatgctta
ctagctcgtgagcaagaacaagcgatgttgtttgcccgcactctacaggaaatcttagga
gatcgtttttactttgagattatgaggcacgatttgccggaagaacagtttattgaggat
agttatattaagatagcttcggaattatctattccgcttgttgctactaataaagttttg
tttagcgaaaaaagcatgcatgatgcacatgatgtgctgttatgtatatcagccggtgtt
actaaagactatcctgatcgtaaaacagttagtgaaaattgttattttaggtcaccgcat
gagatgagagagctgttttctgatctacctaatgccatacaaaatactgtgaatttaaga
gagcgttgttattttgcagcacatgcaaacccgccgatgttgcctaattttgctaccaaa
gatattagtgaaacggatttaattagaaaagatgcaaaagaagggttgcttgcaaggctt
gctacaaagtttaaatctgaaaatatttcattagagaatcaagaagaattgaaaaccgaa
tattttgctcgtcttaattatgagctggatattatctgtaatatgaattttgccggttat
tttttgattgtatccgattttattaaatggagtaaaaaagaggggattttagttggacct
ggtagaggttcgggagcgggctcggttgtcgcttggagcttgcttattactgatctcgat
ccgattaaattcggcttattatttgaaagatttttaaatcccgaacgtatttcgatgcct
gacttcgatattgatttttgtcaagaaagacgtgaagaagtgattaattacgtacgttct
aaatacggtaataatcgagtagggcagattataacttttggtaaaatgcaggcaaaggct
gtaattaaggatgttgctcgtgtgcttagtttaccttataaattcgctgattatctaacg
gagcttgtaccttttagtgcggttaatcccgttacgcttgaacaggcgatgcgtgaagtt
ccagagcttgcaaatgccgctaaaggtaatgggctgtataatttggagggtgaagcggag
ttaattaagctagtgcttgatacttcgttaattcttgaggggttacataggcattcctca
actcatgctgcaggaatcgtaatagcaggtactgatttagtcgatatagtaccggtatat
aaagatgctaattccgatatgctggtagtcggttattctatgaaatattccgaaattgcc
ggtttaattaaatttgattttttaggcctgcaaaccctaacggttattaccgattgtaag
aaactacttaaagagcaaggaatagaagtagattttaacaatatgacctttgatgataat
aagacttatcaaatgttgtgtaaaggtaaaggagtaggtgttttccaatttgaaagtatt
gggatgaaagatgcacttagacgccttaaacctgattctatacatgatttgatcgctctt
ggggctttatatcgtccgggtcctatggaaaatatctctacatatatagcttgtaagcat
aaattacaacagcctgattatttacatgagctattaaagccaatcttagaagaaacttac
ggagtggtgatatatcaggagcaggtacaaagaattgctcagattcttgccggttatacc
ctaggagctgctgatttgcttcgtagagcaatgggtaagaagataaagaaagaaatggag
gagcaggaagaaatcttcgttaaaggagcgattgctaataatatttcggaatctcaagct
aaatccatttttgcaactgtggctaaatttgccggttacggttttaataaagcacatgct
gcggcttatggtgtcatttcataccaaactgcttatcttaaagctaattattcggctgag
tttttagtagcatgtttaaaccttgaattaaataatcatgataaaattaatttattttta
caagaagtaaaagatagcggtataaaaattattgctcctaatattaatatttctgaaggg
tattttacaacttgtcatttcggcagtgctctatgtcatcctcgtgtaggcaaggatcca
gaaaaaactagtgaaatgaaaatgggttcccgcttttgcgggaatgacatagaaggtact
ggatatgacaaagaagaaagtgcaataatcttcgctttaggtgctattaagggagttacg
ccaaatttcggtaagttagtaacagatgagcgaaatgcaagaggagcctttaaatcaatt
actgattttattgaacgattaccgccaaagtctattaacagtaaattattagaaaattta
attaaatctggatgctttgatgagctacatgataatcgattgcaattatttttaagtatt
tcaaagttgcttgcttattcaacttcatatcacgaagagcaggaatctaatcaatttagc
ttaattaaagtttctagtttaagttcaactattttagtatcaagtgattatgccgataaa
aatactttagccttttatgaatttgagtctatgggtttatttatctctaatcatcctctt
acggaatataaaggaatatttagtcgtttaaatattttaaatactgcggatttgcataat
aatttacctgaaggtactcaccgagtaaatcttgccggtgtgatacaaaaaaaggattct
cgtatgtcggcaagaggcaggttcgtgacgcttgtgctttccgatcctgagaatatcttt
gaacttagtatttttagcgaagaagtcttaaaagattatgtacatttactcgaggttaaa
agtttggtagtggttaattgtgatatagttaaaaatgaaggaggaataaaactaacagca
aaaagcttttcatcaatcgaggatgcaattaataataaacaatttgagttacagctttac
cctaaaaattatgaagaattagagcagatagtaaccttgcttgcagctcgcactaataac
ggagatcagagtaatgctaaagcgacaatctatttacaaagcgaagatgtaaagaatttt
gtagcaaaaattacgttatctgaaaaattttttctccaagggcaagattttgagatttta
aaaggatatagtaaatag
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