Rickettsia australis: MC5_04320
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Entry
MC5_04320 CDS
T01783
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rau
Rickettsia australis
Pathway
rau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MC5_04320 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rau03021
]
MC5_04320 (rho)
03019 Messenger RNA biogenesis [BR:
rau03019
]
MC5_04320 (rho)
Transcription machinery [BR:
rau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MC5_04320 (rho)
Messenger RNA biogenesis [BR:
rau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MC5_04320 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
ATPase_2
OB_RNB
Fungal_virus_P2_C
Spore_III_AA
S1CSD-TOTE-2
NACHT
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
AFC71176
UniProt:
H8K7D3
LinkDB
All DBs
Position
complement(760297..761673)
Genome browser
AA seq
458 aa
AA seq
DB search
MNTTNKESTEELNNTESNNNHNNFAENGNIINLKQLKRKLPEELQAQAEALKIENINSLL
KQELVFAILKKSVEQGGLIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFG
LRTGDTVEGQIRAPKAGERYFALLKVNRVNFEDPSKAYHRVHFDNLTPLYPDEKLGLELE
NNSKDSKDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLL
IDERPEEVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIEKAKRLVEHKKDVVILVDAIT
RLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMD
EVIFEEFKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKEDLLVDKIILNKMWVLRRIID
PMGSSEAIEFLLKKLETTKTNNEFFEMMKSPERPKNGL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaactaataaagaatctacagaagaacttaacaataccgagtccaataataat
cataataattttgcagagaacggtaatattattaatttaaaacaattaaaacgtaaatta
ccggaggaactacaagctcaagcagaagcattaaaaatcgaaaatattaattcattactt
aaacaagaattagtttttgcaattttaaaaaaatctgtagagcagggaggtttaatagtg
ggagaaggggtacttgaagtactacctgacggatttggttttttacgttcgccagaagta
aactatttagcaggtcctgatgatatttatatttctcctagtcagattcgtcgctttggt
ctgcgtaccggtgatactgtagaaggtcagatcagagctccaaaagccggagaacgttat
tttgctttactgaaagtcaatagagtaaattttgaagacccttctaaagcttatcatcgt
gttcattttgataatttaactcccttatatcctgatgaaaaattaggattagaacttgaa
aataatagtaaagatagtaaggattttagtacacgagttattgaacttgttgcccctatg
ggtaaaggacaacgtgcattaatagtagcaccacctcgtacaggtaaaaccgtattatta
caaaatatagcacatgcaattacaaccaataatccggaagtatttttaatagtactgtta
atagatgaaagacctgaagaagtaaccgatatgcaacgttctgtgcgtggagaggttgtt
agctctacttttgatgaaccagcaagtaggcacgtacagcttgcagaaatggttatcgaa
aaagcaaagcgtttagtagaacataaaaaagacgtagtaattttagtagatgcgataaca
cgtttagctcgtgcttataataccgtagtgccgtcatcaggtaaagtattaacgggcggt
gttgatgccaatgcactacaaagaccgaaaagattttttggagcagcaagaaatatcgaa
aatggcggttcgcttactataataggtacagctttaattgaaaccggttctcgtatggat
gaggtaatttttgaggagtttaaaggtacaggtaattccgagatagttctagatcgtaag
attgccgataaacgtatttatccggctattgatataacgagatcaggaactagaaaagaa
gatttattagtagataaaataatattaaataaaatgtgggttcttcgtcgtattatcgac
ccaatgggtagcagtgaagcaatagaatttttactcaaaaaacttgaaactactaaaacc
aacaatgagttttttgagatgatgaagagtcctgaacgccctaagaatggtttgtag
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