Rickettsia australis: MC5_04800
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Entry
MC5_04800 CDS
T01783
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rau
Rickettsia australis
Pathway
rau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MC5_04800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rau03019
]
MC5_04800
Messenger RNA biogenesis [BR:
rau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MC5_04800
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Lactamase_B_6
DUF4587
DUF826
Motif
Other DBs
NCBI-ProteinID:
AFC71253
UniProt:
H8K7L0
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Position
complement(845420..847102)
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AA seq
560 aa
AA seq
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MSSFNIKNHKNDLLFVPLGGSNEIGMNLNLYHYKGKWLMIDCGSGFADDYLPGVDMIIAD
SSFIEKYKKDIVGLILTHAHEDHLGGVQYLWSSLKCPIYTTTFTANFLKIRLNEYDFAKN
IKIHEVKPGSKISLEPFSLEMVPLTHSAPEMQAIMIRTDAGNILHTGDWKFDNDPVLGKK
VDEELLKSYGDEGVLALVCDSTNVFNKGSSGSEGDVRKSLVDIIAGCPQMVVVSTFASNL
ARLDTIIHAAGLAGRKVVLTGRSLHRMMLAAQESGYFKDISPLISERDVSRFRREELLVI
ATGCQGEPMAVTTKLASNSHPSIRLAPKDTMIFSSKIIPGNEKKIFRLFNIFVKAGVEVI
TERDHFVHVSGHPSIDELHKMYSLIRPNICIPVHGEPVHIHEHVKLAKKNGIKQAVEVEN
GSVVLLEPNNATVISKVENGYLAVDGNYLLPVESPIFKTRRRMRESGIVVASVVINKKGL
LAANPMLSMPGLLDPKEDMALVNLIKNDIKELVTIQNKQAKKALSDEQVIEAIKGTIRKT
LKQEINKSPVIIVNLEKTVE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattcaacatcaaaaatcataaaaatgatctgctatttgtaccgctaggagga
tctaatgaaataggtatgaatcttaatctttatcattataaaggtaaatggttaatgatt
gattgcggtagtggttttgctgatgactacttacctggtgttgatatgataattgccgat
agtagctttatagagaaatataaaaaagatatagtaggtctgattttaactcatgctcac
gaggatcatttaggcggtgtacaatatttatggagtagccttaaatgtcctatttatact
actactttcacagcaaattttttaaaaattcgtttaaatgaatatgattttgctaaaaat
ataaaaattcatgaagtgaaacccggtagtaaaataagtctagagcctttttccttagag
atggtgccactgactcactcggctcctgaaatgcaagcaattatgatccgtacggatgca
ggtaatattttacatacgggagattggaaatttgataatgatccggtacttggtaaaaaa
gtcgatgaggagcttctaaagtcttatggagatgaaggggttcttgcacttgtttgtgat
tcaactaacgtgtttaataaaggaagctcagggtctgagggagatgttagaaaaagttta
gtagatatcatagccggctgccctcaaatggtagtagtttcaacctttgcatctaattta
gcacggcttgatacaataattcatgctgcaggactggccggtagaaaagtagtcttaacc
ggtagaagtttgcatcgtatgatgcttgctgctcaagaaagcggctattttaaagatatt
tctcctctaattagtgaacgtgatgttagtagatttagaagagaagaattattagtaatt
gctaccggttgtcaaggcgagcccatggcagtaactacaaaactggctagtaattctcat
ccgtcaataagacttgctcctaaggatacgatgattttttcttcaaaaattattcctggt
aatgaaaaaaaaatattcagactatttaatatatttgttaaagccggtgtagaagttatt
accgaacgtgaccattttgtgcatgtttcaggacatccatcgattgacgagttgcacaaa
atgtattctttaattagaccaaatatttgtatacctgttcacggcgagcctgtacatatt
catgaacatgttaagcttgctaagaaaaacggtataaaacaggcagtagaggttgaaaac
ggtagcgtagtattgcttgaacctaataatgcaacagtaatttcaaaggttgaaaacggt
tatttagctgtagatggtaattatttactccctgtagaatctccgattttcaaaactaga
agacgtatgcgtgagtcgggtatcgtggtagcgtcagtagtaattaataaaaaagggctg
cttgctgcaaacccaatgctgtctatgcctggtctgcttgatccaaaagaggatatggcg
ttggttaatctcattaaaaacgatattaaagaacttgttaccattcaaaataaacaggct
aaaaaagcattgtcggatgaacaagtaatcgaagcaataaaaggcacaattcgtaaaacc
ttaaaacaagaaattaataagtcacccgttataatagtaaaccttgagaaaactgtggag
tag
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