Rhodococcus aetherivorans: AAT18_06080
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Entry
AAT18_06080 CDS
T03876
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
rav
Rhodococcus aetherivorans
Pathway
rav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AAT18_06080
09124 Replication and repair
03420 Nucleotide excision repair
AAT18_06080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rav03021
]
AAT18_06080
03400 DNA repair and recombination proteins [BR:
rav03400
]
AAT18_06080
Enzymes [BR:
rav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAT18_06080
Transcription machinery [BR:
rav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AAT18_06080
DNA repair and recombination proteins [BR:
rav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AAT18_06080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
AKE88873
UniProt:
A0A059MV36
LinkDB
All DBs
Position
complement(1314701..1316359)
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AA seq
552 aa
AA seq
DB search
MADGPLIVQSDKTLLLEVDHALANEARQAIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVTHSRFAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVM
RNKKIAPMLGARLDDDTVIVHPSERGRLKQMLLKVGWPAEDLAGYVDGEAHAINLDFETN
PWHLRDYQEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAGATTLILVTNTVAGRQWK
RELIARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRKSKGEYRNLELFDSRDWGLMIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APAECVEVRVTLTDAERMTYAVAEPEERYKLCSTAHTKIAVVKSILDRHRDSPTLIIGAY
LDQLDELGEALDAPVIKGSTRNKEREELFDRFRAGELKVLVVSKVANFSIDLPEASVAVQ
VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRI
TDADDLLGPTIG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacggaccgttgatcgtccagtccgacaagaccctgctcctcgaggtcgaccac
gccctcgcgaacgaggcccggcaggccatcgcgccgttcgccgagctcgaacgcgccccc
gagcacgtgcacacctaccgggtcaccccgctggcgttgtggaacgcccgcgccgcggga
cacgacgccgagcaggtcgtcgacgccctggtcacccactcccggttcgcggtcccgcag
ccgctgctcgtcgacatcgtcgacaccatggcccgctacggccggctgcagctggtgaag
aaccccgcacacggcctgaccctggtcagcctcgaccgggcggtgctcgaggaggtgatg
cgcaacaagaagatcgcgccgatgctcggcgcccggctcgacgacgacaccgtgatcgtg
catccgagcgagcgcggccggctcaagcagatgttgctcaaggtcggctggccggccgag
gacctcgccggctacgtcgacggtgaggcacacgcgatcaacctcgacttcgagaccaac
ccctggcacctgcgggactaccaggagatggccgcggactcgttctgggccggcggctcc
ggcgtggtggtgctgccgtgcggggcggggaagacgatggtgggtgcggccgcgatggcc
aaggcgggcgccaccaccctgatcctggtgaccaacaccgtcgcgggccggcagtggaag
cgcgagctgatcgcccgcacgtcgctcaccgaggacgagatcggcgagtactccggggag
aagaaggagatccgcccggtcaccatcgccacctaccaggtcatcacccgcaagtcgaag
ggcgagtaccgcaacctcgagctgttcgactcccgcgactgggggctgatgatctacgac
gaggtgcatctgctgcccgccccggtgttccggatgacggccgacctgcagtcccggcgc
cggctcggcctcaccgcgaccctcgtgcgcgaggacggccgcgagggcgacgtattctcg
ctcatcggccccaagcgctacgacgcaccgtggaaggacatcgaggcgcagggctggatc
gcgcccgcggagtgcgtcgaggtgcgggtgaccctgaccgacgcggaacggatgacgtac
gcggtggccgagcccgaggagcggtacaagctgtgctcgaccgcgcacacgaagatcgcg
gtggtgaagtcgatcctggaccggcaccgcgactcccccaccctgatcatcggggcgtac
ctcgatcagctcgacgagctcggcgaggcgctggacgccccggtgatcaagggctcgacc
cggaacaaggagcgcgaggagctgttcgaccgcttccgcgccggtgagctgaaggtgctc
gtcgtgtcgaaggtcgcgaacttctcgatcgacctgcccgaggcgtcggtggcggtgcag
gtgtcgggcacgttcggctcgcgccaggaggaggcgcagcgcctcggccggttgctgcgc
cccaagcacgacggcgggcaggcgcacttctactcggtcgtcgcgcgcgacaccctcgac
gccgagtacgccgcgcaccggcagcggttcctcgccgaacagggttacgcgtaccggatc
accgacgcggacgatctgctcggccccaccatcggctga
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