Rhodococcus aetherivorans: AAT18_08530
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Entry
AAT18_08530 CDS
T03876
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rav
Rhodococcus aetherivorans
Pathway
rav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAT18_08530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rav03019
]
AAT18_08530
03400 DNA repair and recombination proteins [BR:
rav03400
]
AAT18_08530
Enzymes [BR:
rav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAT18_08530
Messenger RNA biogenesis [BR:
rav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAT18_08530
DNA repair and recombination proteins [BR:
rav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AAT18_08530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
LSDAT_prok
AAA_30
Cas3-like_C_2
WH_Rok
Motif
Other DBs
NCBI-ProteinID:
AKE92438
LinkDB
All DBs
Position
complement(1821242..1822897)
Genome browser
AA seq
551 aa
AA seq
DB search
MRAELRTAARRVFGWEELRPGQLDAMEPLVRGRDVLAVMATGSGKSAIYQVPALLIEGTT
LVISPLIALQNDQIAGLDATSAPDAVAINSRQRASETAAAWETIRERTVEYVFLAPEQLA
NDEVVARLADAHVSLVVVDEAHCVSAWGHDFRPDYLRLADALDRLGRPPVVALTATASPP
VRQEIVEELRLRDPVVIASGFDRPNIDLAVERYTTDAEKRRAVIETVAGLETPGLLYTAT
RKDAEFYAAELADRGLRAAAYHAGLASATRERVHHGFLDGEYEVVVATSAFGMGIDKPDV
RFVAHASAPDSVDSYYQQIGRAGRDGLEAKALLFYRPEDLSLAKFFTTHRPDEELLGRAF
TALRRAKAPTRLKDLRAELDTRGRTLTNAVNLLERAGVVSSGRKGFTARTVEVEIAVRRA
AEVAAVGERMDRSRVEMMRGYAETRGCRRQFLLGYFGESLLEPCGHCDCCREGIPESRPE
PANHVRHESIPLHTRVVHAQWGAGEVMSAETDRITVLFDGYGYRTLSLEAVEEHDLLRPE
NSEPEPEPDIA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atccgggccgagctacggacggccgcgcgccgcgtgttcggctgggaggaactgcgtccc
ggccagctcgacgcgatggaaccgctggtgcggggccgggacgtgctcgcggtgatggcc
accggatcgggcaagtcggcgatctaccaggtgccggcgttgctgatcgagggcacgacc
ctggtgatctccccgctcatcgcgctgcagaacgatcagatcgcaggtctcgacgccacc
tcggcgccggacgcggtcgcgatcaattcccggcagcgggcctcggagaccgcggccgcg
tgggagacgatccgggagcgcaccgtggagtacgtcttcctggcgccggagcagctcgcc
aacgacgaggtggtggcccgtctcgccgacgcgcacgtctctctcgtggtggtcgacgag
gcgcactgtgtgtccgcgtggggccacgacttccggcccgactacctgcgcctggcggac
gcgctcgaccggctcggccggccgccggtggtggcgctcacggccaccgcatcgccgccg
gtgcggcaggagatcgtcgaggagctgcgcctgcgcgacccggtggtgatcgccagcgga
ttcgatcggcccaacatcgatctggctgtcgagcggtacacgaccgacgccgagaaacgc
cgggcggtgatcgagacggtcgccggactcgagacgcccgggctgctgtacaccgcgacg
cgcaaggacgccgagttctatgcggccgaactggccgaccggggactgcgggcggccgcg
taccacgccggcctggcgtcggccacgcgcgagcgggtacaccacgggttcctcgacggc
gagtacgaggtggtggtggcgacctccgcgttcggcatgggcatcgacaagcccgacgtg
cggttcgtcgcgcacgcctccgcgccggattccgtggacagctactaccagcagatcggc
cgggccgggcgcgacgggctcgaggcgaaggcgctgctgttctaccggcccgaggacctc
tcgctcgcgaagttcttcacgacccaccgcccggacgaggaactgctcggccgggcgttc
accgcactgcggcgcgcgaaagccccgacgcgactgaaagacctacgcgccgaactggat
acccgcggccggaccctgaccaacgcggtcaacctgctcgaacgggccggggtggtctcc
tcgggacgcaaagggttcaccgcacgcaccgtcgaggtggagatcgccgtccggcgcgcg
gcggaggtggcagcggtgggcgaacggatggaccgctcccgcgtggagatgatgcgcggc
tacgccgaaacccgcggctgccgaaggcagttcctgctcgggtacttcggcgagtcgctg
ctcgaaccgtgcggccactgcgactgctgccgcgaggggatccccgagagccggcccgag
ccggcgaatcatgttcgtcacgaatcgattccgctacacacccgggtcgtgcacgcgcag
tggggcgccggcgaggtgatgagcgcggagacggaccggatcaccgtgctgttcgacgga
tacggctaccgcaccctctcgctcgaggcggtcgaggagcacgacctgctgcgccccgag
aactcggagcccgagccggagcccgacatcgcctga
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