Rhodococcus aetherivorans: AAT18_09495
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Entry
AAT18_09495 CDS
T03876
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rav
Rhodococcus aetherivorans
Pathway
rav03030
DNA replication
rav03430
Mismatch repair
rav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAT18_09495
03430 Mismatch repair
AAT18_09495
03440 Homologous recombination
AAT18_09495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rav03032
]
AAT18_09495
03400 DNA repair and recombination proteins [BR:
rav03400
]
AAT18_09495
Enzymes [BR:
rav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAT18_09495
DNA replication proteins [BR:
rav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAT18_09495
DNA repair and recombination proteins [BR:
rav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAT18_09495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AKE92469
LinkDB
All DBs
Position
2042813..2044654
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AA seq
613 aa
AA seq
DB search
MIDTLSHASGSRTLPKGHRWVVVDVETSGLRAYAHRVLSVAALVLREDGSVEREYSTLVD
PGCDPGPVHVHRLTRERLAGAPRFEQIAGELAEVLDGGTIVAHNAAFDYGFLDAEFRRAG
TEIPARQRLCTLALSRRLELDVPDHKLSTLAAHWQVQQLLEHDAYDDARVLSEVFVRSAL
LAESLQLPLPVVDCLSRRPAYPDSVPRVPCEWKNPGRLSLDVGLVQGMKVVVTGQTVTPR
VPLAGRMADAGLDVMNSVSRQTSVVVCNDPGVQTGKIRKAMAEGIPVVTEQQLEEMLTRV
NPGEPKMRPVVEVAAPPAEPVIEPPPQPETAEPLADVPSLPERMLTGQKPKLWQGRRVLL
LGGTHLDAVLMRSRLVQLGARPSLNLTAAVTDVLMLEGGDSDRRMPRITARELPVLTMTD
ISAAVEKGVVPPHMRIESRISAPALARGEVIDLPARKTSWTVNVAWRAETDDFDVDVVAF
LLAEDEKVDSDDDFVFYNNPSAEDGAVELSIDGSSEQSVRFDLAALPDECGCVAIAAAID
GERAFGELGAVSVSVDGEDGTAATFVLDAGTTERTMVLTEIYRRAGKWRLRAVGQGYDDG
LTELAVRYGVDVD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacacgctgtcgcacgcgtcgggttcgcggacgctgccgaagggccaccgctgg
gtggtcgtcgacgtcgagacctccggcctgcgcgcctacgcgcatcgggtgctcagcgtg
gccgcgctggtgttgcgggaggacggcagcgtcgagcgggagtactcgacgctcgtcgac
ccgggttgcgaccccggcccggtccacgtgcaccggttgacgcgcgaacggctcgccgga
gctccccgcttcgagcagatcgccggcgaactcgccgaggtgctggacggcgggaccatc
gtcgcccacaacgcggccttcgactacggattcctcgacgccgagttccggcgcgccgga
accgagatcccggccagacagcggttgtgcactctcgccctgtcgaggcggctcgaactc
gacgtgcccgatcacaaactctccaccctggccgcccactggcaggtccagcagttgctc
gagcacgacgcctacgacgacgcccgcgtcctcagtgaggtcttcgtacgcagcgccctg
ctcgccgagagcctgcagctcccgctgccggtggtcgactgcctcagccgcaggcccgcc
tacccggactccgtgccgcgcgtgccgtgcgagtggaagaacccgggacgcctgtcgctg
gacgtcggcctggtgcaggggatgaaggtggtcgtcacggggcagacggttacgccgcgg
gtcccgctcgccggccggatggccgacgccggcctcgacgtcatgaattccgtcagtcgc
cagacgagcgtggtcgtgtgcaacgaccccggcgtacagacgggcaagatccgcaaggcg
atggccgagggcattcccgtcgtcaccgagcagcagctcgaagagatgctcacccgggtg
aatccgggtgaaccgaagatgcgtcccgtggtcgaggtggccgcgccccctgccgagccg
gtgatcgaacctccgccgcagccggagactgcggagcccctcgccgatgtaccgagcctg
cccgagcggatgctcacgggacagaagccgaagctgtggcagggccggcgggtgctgctc
ctcggcggcacccacctcgacgccgtgctcatgcgctcgcgtctcgtccagctcggtgca
cgcccgtcgctcaacctcaccgcggcggtcacggacgtgctgatgctggaaggcggcgac
agcgaccggcgcatgccgcgcatcaccgcgcgcgagctccccgtcctgaccatgacggac
atcagcgccgcggtggagaagggcgtcgtgccgccgcacatgcgcatcgagtcccgcatc
tccgcgccggcgctcgcccgaggcgaggtcatcgacctgccggcgcggaagacgtcgtgg
acggtcaacgtcgcgtggcgcgccgagacggacgacttcgacgtcgacgtcgtcgccttc
ctgctcgcggaagacgagaaggtcgacagcgacgacgacttcgtcttctacaacaacccc
tccgccgaggacggcgcggtcgagctgtcgatcgacggcagcagcgaacagagcgtgcgg
ttcgacctggccgcgctgcccgacgaatgcggatgcgtcgcgatcgccgccgcgatcgac
ggcgagcgggccttcggcgaactgggggctgtgtcggtgagcgtggatggtgaggacggc
acggcggcgacgttcgtactcgacgccgggactaccgaacggaccatggtgctcaccgag
atctatcggcgggcggggaaatggcggctgcgcgcggtggggcaggggtacgacgacggg
ctgaccgagttggcggtgcggtacggcgtggacgtcgactga
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