Rhodococcus aetherivorans: AAT18_11690
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Entry
AAT18_11690 CDS
T03876
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rav
Rhodococcus aetherivorans
Brite
KEGG Orthology (KO) [BR:
rav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rav03016
]
AAT18_11690
Enzymes [BR:
rav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AAT18_11690
Transfer RNA biogenesis [BR:
rav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AAT18_11690
Prokaryotic type
AAT18_11690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AKE89783
UniProt:
A0A059MRX3
LinkDB
All DBs
Position
2532890..2533798
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AA seq
302 aa
AA seq
DB search
MSASENPALARAGLLVVDKDPGMTSHDVVARCRRLLGTRKVGHAGTLDPMATGVLVLGVE
RATKMLGLLALTTKAYSATIRLGQSTVTDDAEGEVLATTDASAVADEAIAAAVAALTGEI
SQVPASVSAIKIDGKRAYARMREGETVELAARPVTVSRFEVLSRRTTSDGFVDLDVEVEC
SSGTYIRALARDLGAALGVGAHLTALRRTRVGPFGLEHARTLAQLEESPTVSLDIDAAVR
TAFPCRDVTAAEAELLANGRWLDPVGIPGVYAAIDPSGRAAALLQEKGKRASAVFVVRPA
TM
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgcctccgagaaccccgccctcgcccgtgccggcctgctcgtcgtcgacaaggac
ccgggtatgaccagccacgacgtggtggcccgctgccggcggctgctcggcacccgcaag
gtcggtcatgccggcaccctcgacccgatggcgacgggcgtgctcgtgctcggggtggag
cgcgcgacgaagatgctgggcctgctcgccctcaccaccaaggcgtattcggcgacgatc
cggctcgggcagagcaccgtcaccgacgacgccgagggtgaggtgctcgcgaccaccgac
gcctccgccgtcgcggacgaggcgatcgcggcggccgttgccgcgctcacgggggagatc
tcccaggtgcctgccagcgtcagcgcgatcaagatcgacggcaagcgcgcctacgcccgg
atgcgcgagggggagaccgtcgagctcgcggcccggccggtcacggtctcgcggttcgag
gtgctgtcccggcggaccacctcggacgggttcgtcgatctcgacgtcgaggtggagtgc
tcgtccggcacctacatccgggcgctggcccgggatctgggggccgccctgggcgtcggc
gcgcacctgacggcgctgcggcgcacccgggtcggcccgttcgggctcgagcacgcccgc
acgctcgcccagctcgaggagagcccgaccgtgagcctggacatcgatgcagccgtccgc
accgcgttcccgtgccgcgacgtcaccgcggcggaggcggaactgctggcgaacggccgg
tggctggatccggtggggattcccggcgtgtacgcggcgatcgacccgtccggccgggcc
gcggcgctgctgcaggagaagggcaagcgggcctcggcagtgttcgtcgtgcgcccggcc
accatgtag
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integrated database retrieval system
