Rhodococcus aetherivorans: AAT18_11730
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Entry
AAT18_11730 CDS
T03876
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rav
Rhodococcus aetherivorans
Pathway
rav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAT18_11730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rav03019
]
AAT18_11730
03016 Transfer RNA biogenesis [BR:
rav03016
]
AAT18_11730
Enzymes [BR:
rav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AAT18_11730
Messenger RNA biogenesis [BR:
rav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAT18_11730
Transfer RNA biogenesis [BR:
rav03016
]
Prokaryotic type
tRNA degradation factors
AAT18_11730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AKE89791
UniProt:
N1MEL3
LinkDB
All DBs
Position
2540440..2542731
Genome browser
AA seq
763 aa
AA seq
DB search
MTSNSAVEVDEGVFESVAVLDNGSFGTRQIRFETGRLAQQAAGSVVAYLDDETMLLSATS
ASKQPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVLSLNPNDLYDVVAINAASASTQIAGLPFSGPVGGVRVALITSEENKTG
QWVAFPTVEQLENAVFDMVVAGRIVGGGDNPDTADVAIMMVEAEATENVVELVAGGAQAP
TETVVAEGLEAAKPFIARLCVAQQQLAAAAAKPTGDFPLFPAYEADVYEAVEAAASTKLA
EALTIAGKQERDERTDEVKVEVLEQVAPNFEGREKEIGAAFRSLTKKLVRQRILRDKFRI
DGRGITDIRALSAEVAIVPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRY
MHHYNFPPYSTGETGRVGSPKRREIGHGALAERALIPVLPSQEEFPYAIRQVSEALSSNG
STSMGSVCASTLSLLNAGVPLKAPVAGIAMGLVSDEVDGETRYVALTDILGAEDAFGDMD
FKVAGTKDFVTALQLDTKLDGIPSQVLAGALSQAHDARATILEVMAEAIETPDEMSPFAP
RITTIKVPVDKIGEVIGPKGKMINSITEETGANISIEDDGTVYVGAADGPSAQAAIDKIN
AIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRIAKVEDVVNVGS
KIRVEIADIDNRGKISLVPVPDEDTADASGETPEAPAAEDTQQ
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaattcagcagtcgaggtcgacgagggcgtgttcgagtccgtcgcagtcctc
gacaacgggtccttcggcacccgccagattcgtttcgagaccggccgcctcgcccagcag
gccgccggctccgtcgtcgcgtacctcgacgacgagaccatgctgctgtcggcgacgagc
gccagcaagcagcccaaggagcacttcgacttcttcccgctgacggtggacgtcgaggag
cgcatgtacgccgcgggccgcatccccggctcgttcttccgtcgcgagggccggccctcc
accgacgcgatcctgacctgtcgcctcatcgaccggccgctgcgcccgtccttcgtcgac
ggcctgcgcaacgagatccaggtcgtggtgacggtgctcagcctgaacccgaacgacctg
tacgacgtcgtcgcgatcaacgccgcgtcggcgtccacccagatcgccggcctgccgttc
tccggcccggtcggcggcgtgcgggtcgcgctgatcacctccgaggagaacaagaccggc
cagtgggtcgcgttcccgacggtcgagcagctcgagaacgccgtgttcgacatggtggtc
gcgggtcgcatcgtgggtggcggcgacaaccccgacaccgccgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaacgtcgtcgagctggtcgccggcggtgcgcaggcgccg
accgagaccgtcgtcgccgagggtctcgaggccgccaagccgttcatcgcgcggctgtgc
gtcgcccagcagcagctcgccgccgcggccgcgaagcccaccggtgacttcccgctgttc
ccggcctacgaagccgacgtgtacgaggccgtcgaggccgccgcgtcgaccaagctggcc
gaggcgctgaccatcgccggcaagcaggagcgcgacgagcggaccgacgaggtcaaggtc
gaggtcctcgagcaggtggcccccaacttcgagggccgtgagaaggagatcggcgcggcg
ttccgctcgctcaccaagaagctggtccgccagcggatcctgcgggacaagttccgcatc
gacggccgcggcatcacggacatccgcgccctgtccgccgaggtcgcgatcgtgccccgg
gcccacggctcggcgctgttcgagcgtggcgagacccagatcatgggggtcaccacgctg
gacatggtgaagatggcgcagcagatcgattcgctcggtcccgagaccagcaagcggtac
atgcaccactacaacttcccgccgtactccaccggtgagaccggccgcgtcggctcgccg
aagcgccgcgagatcggccacggcgccctcgccgagcgggccctgatcccggtcctgccc
agccaggaggagttcccctacgcgatccgtcaggtctccgaggcgctcagctcgaacggc
tccacctcgatgggctcggtgtgtgcctcgacgctgtcgctgctcaacgccggtgtgccg
ctcaaggccccggtcgcgggcatcgcgatgggcctggtctccgacgaggtcgacggggag
acccgctacgtcgcgctgaccgacatcctcggcgccgaggacgcgttcggtgacatggac
ttcaaggtggccggcacgaaggatttcgtcaccgcgctgcagctcgacaccaagctcgac
gggatcccgtcgcaggtgctcgccggggcgctgtcgcaggcgcacgacgcccgcgccacc
atcctcgaggtgatggccgaggccatcgagaccccggacgagatgagcccgttcgcgccc
cggatcaccaccatcaaggtcccggtcgacaagatcggcgaggtcatcggccccaagggc
aagatgatcaactcgatcaccgaggagaccggcgcgaacatctccatcgaggacgacggc
acggtgtacgtcggtgccgccgacggcccgtccgcgcaggccgcgatcgacaagatcaac
gccatcgcgaacccgcaactgccgaaggtgggcgaacgcttcctgggcaccgtggtcaag
accacggcgttcggcgcgttcgtctcgctgctgccgggccgcgacggcctggtgcacatc
agcaagctcggcaacggcaagcgcatcgccaaggtcgaggacgtcgtcaacgtgggctcg
aagatccgcgtggagatcgccgacatcgacaaccggggcaagatcagcctggtgccggtg
cccgacgaggacaccgccgacgcttcgggcgagacacccgaggctcccgcggccgaggac
acgcagcagtag
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integrated database retrieval system
