Rhodococcus aetherivorans IcdP1: AAT18_13835
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Entry
AAT18_13835 CDS
T03876
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
rav
Rhodococcus aetherivorans IcdP1
Brite
KEGG Orthology (KO) [BR:
rav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rav03019
]
AAT18_13835
Enzymes [BR:
rav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AAT18_13835
Messenger RNA biogenesis [BR:
rav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AAT18_13835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
AAA_22
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AKE90146
LinkDB
All DBs
Position
3025553..3028282
Genome browser
AA seq
909 aa
AA seq
DB search
MTDSTDTGSTATALPPRLAEFAAELSFPLDPFQVQACRALEGGHGVLVCAPTGAGKTVVG
EFAVHLALRAGSKCFYTTPIKALSNQKYADLVARYGKASVGLLTGDQSVNPDAPVVVMTT
EVLRNMLYASSTTLIGLTHVVMDEVHFLADRFRGAVWEEVILHLPEDVRLVSLSATVSNA
EEFGDWMETVRGDTTVVVDEVRPIPLHQHVMVGPRIFDLFESTAHPDAADGTGRRGVVVN
RELVEQVRRRAALDSTGRWGGPRGRIGFRPLPRPEVVARLDREGLLPAITFVFSRAGCDA
AVGQCLRAGLHLASDAETAQIRAIVDEHTGDLPRADLEVLGFREWRAALERGIAAHHAGM
LPAFRHTVEDLFVRGLVRAVFATETLALGINMPARTVVLEKLVKYNGETHAELTPGEYTQ
LTGRAGRRGIDVEGHAVVLWQPGLEPADVAGLASTRTFPLRSSFRPSYNMAVNLIDAVGA
EHSRALLERSFAQFQADKSVVGLTRGIERNEKALAKLRDQLGGEDGDIIDYLQLREELTQ
LERRRERQARQDRRQAAVASLLALRRGDIVAIPGGRRTGLAVVLETDTDVTDPRPLVVTA
DAWSGRVSAADFPAPATALGKLRLPRHADARTARARRDLASALRSTGISAPRRPKHAKNG
DTREIDDLRRRLRRHPAHQHPDLDRLARLGERYNRLGREVAQMRRQSAATTNSLARTFER
IVALLTERGYLTAGDDPSTTEAGERLARIYSESDLLVAECLRHGVWAGLSPAELAAVVSA
VVYEARVEEGATEYGPTGPLRRALADTVRLCGQLRADEVRFKLPPTREPDPGFVDAIYTW
VSTQSLTEALIAAGAAGRDLSAGDFVRWCRQVIDLLDQIRTGAVDPQIAKTAARAIGAIR
RGVVAVDAA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgactccaccgacaccggatccaccgcgaccgcgctgccgccccggctcgccgaa
ttcgccgccgagctgtccttcccgctcgatccgttccaggtgcaggcctgccgcgccctc
gagggcgggcacggcgtgctcgtgtgcgcccccaccggcgccggcaagaccgtcgtcggt
gagttcgccgtgcacctggcgctgcgcgccggcagcaagtgcttctacaccacccccatc
aaggcgttgagcaaccagaagtacgccgatctcgtcgcccgctacggcaaggcctcggtc
ggcctgctcaccggcgatcagtccgtcaacccggatgccccggtggtggtgatgaccacc
gaggtgctgcgcaacatgctctacgcctcctcgaccaccctgatcgggctgacccacgtg
gtgatggacgaggtgcacttcctcgccgaccggttccgcggcgcggtgtgggaggaggtc
atcctgcacctgcccgaggacgtgcgcctggtcagcctgtccgccaccgtctccaacgcc
gaggagttcggcgactggatggagaccgtgcgcggcgacaccaccgtcgtcgtcgacgag
gtgcggcccatcccgctgcaccagcacgtcatggtcggcccccgcatcttcgacctgttc
gaatccaccgcgcacccggacgccgcggacggcaccggccgccgcggcgtcgtggtcaac
cgcgaactcgtcgagcaggtgcgccgccgcgccgccctcgactcgaccggccggtggggc
ggtccccgcgggcgcatcgggttccggccgctgccgcgtccggaggtggtcgcccgcctc
gaccgggaggggctgttgccggcgatcaccttcgtgttcagccgtgccggctgcgacgcc
gccgtcggccagtgcctgcgcgccggtctgcacctggcctccgacgccgagaccgcgcag
atccgggccatcgtcgacgaacacaccggcgacctgccgcgcgccgacctcgaggtgctc
ggcttccgggagtggcgcgccgccctcgaacgcggcatcgccgcccaccacgccggcatg
ctcccggccttccggcacaccgtcgaggacctgttcgtccgcggcctggtgcgggcggtg
ttcgccaccgaaaccctcgccctgggcatcaacatgccggcccgcaccgtggtgctcgag
aagctggtcaagtacaacggcgaaacccacgccgagctcacccccggcgagtacacccag
ctcaccgggcgggccgggcgccgcggcatcgacgtcgagggccacgcggtggtgctgtgg
cagccgggcctcgagcccgccgacgtcgccgggctcgcctccacccgcaccttcccgctg
cgcagctcgttccgcccgtcgtacaacatggcggtcaacctgatcgacgcggtcggcgcc
gagcactcccgggcgctgctcgaacggtccttcgcccagttccaggcggacaagtcggtc
gtcggcctgacccgcggcatcgaacgcaacgagaaggccctcgccaagctccgcgatcag
ctcggcggcgaggacggcgacatcatcgactacctgcagctgcgtgaggaactcacccag
ctcgaacgccgacgcgaacgccaggcccggcaggaccgccggcaggccgcggtcgcgtcg
ctgctcgcgctgcgccgcggcgacatcgtcgccatccccggcggccggcgcaccggactg
gccgtcgtcctcgaaaccgacaccgacgtcaccgacccccggcccctggtggtcaccgcg
gacgcctggtccgggcgggtctcggccgcggacttcccggcaccggccaccgcgctcggc
aagctccggctgccccggcacgccgacgcccgcaccgcccgggcccgccgtgacctcgcg
tcggcgctgcgcagcaccgggatttccgcgccgcgccgccccaagcacgccaagaacggc
gacacccgcgagatcgacgacctgcggcggcgcctgcgccggcacccggcccaccagcat
cccgacctcgaccgcctcgcccggctcggggaacgctacaaccggctcggccgggaggtc
gcacagatgcgccgccagtccgcggccaccaccaactccctcgctcgcaccttcgagcgg
atcgtcgcgttgctgaccgagcggggctacctcaccgccggcgacgacccgtcgaccacc
gaggcgggggagcggctcgcccgcatctacagcgagagcgacctgctcgtcgccgaatgc
ctgcgccacggcgtgtgggcgggactctcgcccgccgagctcgccgcggtggtctcggcg
gtggtgtacgaggcgcgcgtcgaggagggcgccaccgagtacgggcccaccgggccgctg
cgccgcgcgctcgccgacaccgtccgcctgtgcgggcagctgcgcgccgacgaggttcgt
ttcaagctgccccccacccgcgaaccggatcccgggttcgtcgatgccatctacacgtgg
gtgagcacccagtcgttgacggaggccctgatcgccgccggggccgccggacgcgacctg
tcggcgggcgacttcgtgcgctggtgccggcaggtgatcgatctgctcgaccagatccgc
accggcgcggtcgaccctcagatcgcgaagaccgccgcccgggcgatcggcgcgatccgg
cgcggtgtcgtcgcggtcgatgcggcgtga
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