KEGG   Rhodococcus aetherivorans: AAT18_14705
Entry
AAT18_14705       CDS       T03876                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rav  Rhodococcus aetherivorans
Pathway
rav03030  DNA replication
rav03410  Base excision repair
rav03420  Nucleotide excision repair
rav03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AAT18_14705
   03410 Base excision repair
    AAT18_14705
   03420 Nucleotide excision repair
    AAT18_14705
   03440 Homologous recombination
    AAT18_14705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rav03032]
    AAT18_14705
   03400 DNA repair and recombination proteins [BR:rav03400]
    AAT18_14705
Enzymes [BR:rav01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AAT18_14705
DNA replication proteins [BR:rav03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AAT18_14705
DNA repair and recombination proteins [BR:rav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AAT18_14705
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AAT18_14705
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f HHH_2 NYN_YacP
Other DBs
NCBI-ProteinID: AKE90282
UniProt: A0AA46NST7
LinkDB
Position
complement(3255917..3258640)
AA seq 907 aa
MTRASTSSAPAATAGDRPTLLLLDGHSLAFRAFYALPAENFKTHSGQTTNAVYGFTSMLI
NLLRDEQPTHVAAAFDVNRDTFRAAAYPEYKANRSSAPDEFRGQVDITKDVLEALGIPVM
AEPGYEADDIIATLATQAAAQGYRVLVVTGDRDSLQLVTDDVTVLYPRRGVSDLTRFTPG
AVEEKYGLTPQQYPDFAALRGDPSDNLPSIPGVGEKTAAKWIREFGSLTELVDRVDEVRG
KTGDALRAHLSSVLLNRQLTEMVRDMALPYTPDQLALTPWDRDRIHRLFDDLEFKVLRDR
LFATLSSVEPEAEEGFEVRGGVLEPGTLAGWLAAHAVPGVRHGMAVLGSCVPYGGDATAV
AIAAADGEGAYVSTTTLTPEDEAALAAWLADAAVPKALHEAKAALHALRGRGWTLAGVTS
DTALAAYLVRPGQRTFNLDDLSLRYLKRELRVEESGEQQLSLLDDADAADAKAAEAAILR
ARAVVDLAAALDTELEGIESTALLTDMELPLLGVLADLETTGIAVEAGRLDDLQSGFAAD
VAAAASAAYDVIGKQINLGSPKQLQVVLFDELGMPKTKKTKTGYTTDAEALQNLFEQTGH
PFLEHLLAHREAMKMKTTVDGLVKSIADDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRT
EAGRHIRDAFVVGPGYDLLLTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVGSRAF
GVPIEEVTPELRRRVKAMSYGLAYGLSAYGLAQQLKISTEEAREQMEAYFNRFGGVRDYL
HAVVEQARKDGYTSTLYGRRRYLPDLNSDNRQRREVAERAALNAPIQGTAADIIKVAMID
VQAALRGAGLRSRMLLQVHDELVLEVTADEREQVQQLVRDKMASVIDLSVPLDVSVGFGR
SWDAAAH
NT seq 2724 nt   +upstreamnt  +downstreamnt
gtgactcgtgcatccacctcctccgcgcccgccgccaccgccggcgaccgaccgaccctg
ttgctgctcgacgggcattccctggcgttccgcgcgttctacgccctgccggcggagaac
ttcaagacccacagcggccagaccaccaacgcggtgtacgggttcacctccatgctcatc
aacctgctgcgcgacgagcagcccacccacgtcgccgcggccttcgacgtcaaccgcgac
acgttccgggcggcggcgtaccccgagtacaaggccaatcgcagctcggcgcccgacgag
ttccgcggtcaggtcgacatcaccaaggacgtgctcgaggcgctgggcatcccggtgatg
gccgagcccggctacgaggccgatgacatcatcgcgaccctggccacgcaggccgccgcc
caggggtaccgggtgctcgtcgtcaccggcgaccgggactcgctgcagttggtcaccgac
gacgtgaccgtcctctatcctcggcgcggggtgtcggacctgacccggttcacgcccggg
gcggtggaggagaagtacggcctgaccccgcagcagtaccccgacttcgcggcgctgcgc
ggggatccgagcgacaacttgccctcgatcccgggggtgggggagaagaccgccgccaaa
tggatccgcgagttcggcagcctcaccgagctcgtcgaccgcgtcgacgaggtccgcggg
aagaccggtgacgccctgcgcgcacacctgtccagcgtgctgctcaaccgtcagctcacc
gagatggtgcgggacatggccctgccctacacccccgatcagctggccctgaccccctgg
gaccgtgaccgcatccaccggctgttcgacgacctcgagttcaaggtgctgcgcgaccgg
ctgttcgcgaccctcagctcggtcgagccggaggccgaggagggcttcgaggtgcgcggc
ggcgtgctcgagccgggcacgctcgccggatggctcgccgcgcacgccgtgccgggcgtg
cggcacggcatggcggtgctcggttcctgcgtcccgtacggcggcgacgccacggccgtg
gcgatcgccgcggccgacggtgagggcgcgtacgtgagcaccaccaccctcacgcccgag
gacgaggcggcgctcgccgcctggctggccgacgcggccgtgcccaaggcgctgcacgag
gcgaaggcggccctgcacgcactgcggggccgcgggtggacgctggccggggtcaccagc
gacaccgccctcgccgcctacctcgtgcgtcccggccagcgcaccttcaacctcgacgac
ctgtccctgcgctacctcaagcgggagcttcgggtggaggagtcgggggagcagcagctc
tcgctgctcgacgacgccgacgccgccgacgcgaaggccgcggaggcggcgattctgcgg
gcccgggcggtggtggacctcgccgcggccctggacaccgagctcgaggggatcgagtcc
accgccctgctgaccgacatggaactgcccctgctgggtgtgctcgccgacctcgagacg
accggaatcgcggtcgaggccggacggttggacgacctgcagtccggcttcgccgcggac
gtcgccgccgcggcgtcggccgcctacgacgtgatcggcaagcagatcaacctcggctca
ccgaagcaactgcaggtggtgttgttcgacgagttggggatgccgaagacgaagaagacc
aagaccggctacaccaccgacgccgaggcgctgcagaatctgttcgagcagaccgggcac
ccgttcctcgagcacctgctcgcgcaccgggaagcgatgaagatgaagaccacggtcgac
ggcctggtcaagtccatcgccgacgacggccggatccacaccaccttcaaccagaccgtg
gccgccaccggccggttgtcctcgaccgagccgaacctgcagaacatcccggtgcgcacg
gaggcgggccggcacatccgcgacgcgttcgtcgtcggccccggctacgacctgctgctc
accgcggactacagccagatcgagatgcggatcatggcgcacctctccggcgacgagggc
ctgatcgaggcgttcaacaccggcgaggacctgcacagcttcgtcggttcccgggcgttc
ggggtgccgatcgaggaggtcactccggagctgcggcgacgggtcaaggcgatgtcgtac
gggctggcctacgggctcagcgcgtacgggctggcgcagcagctgaagatctccaccgaa
gaggcccgcgaacagatggaggcctacttcaaccgcttcggcggcgtgcgcgactacctg
cacgccgtcgtcgagcaggcccgcaaggacggctacacctccaccctctacggccgcagg
cgctacctgccggatctgaacagcgacaaccgtcagcgccgggaggtcgccgagcgggcc
gcgctcaacgccccgatccagggcaccgccgccgacatcatcaaggtcgcgatgatcgac
gtgcaggcggcgctgcgcggggccgggttgcggtcgcgcatgctcctgcaggtgcacgac
gaactggtgctcgaggtgaccgccgacgagcgcgaacaggtgcagcagctggtgcgggac
aagatggcctcggtcatcgacctgtcggttccgctggacgtctcggtcggcttcgggcgc
agctgggacgccgccgcgcactga

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