Rhodococcus aetherivorans: AAT18_19740
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Entry
AAT18_19740 CDS
T03876
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
rav
Rhodococcus aetherivorans
Brite
KEGG Orthology (KO) [BR:
rav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rav03021
]
AAT18_19740
Transcription machinery [BR:
rav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AAT18_19740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR
HTH_Crp_2
HTH_3
DUF7343
HTH_24
MarR_2
HTH_AsnC-type
HTH_23
Sigma70_ECF
HTH_31
HTH_ParB
KORA
LacI
HTH_Tnp_4
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AKE91110
LinkDB
All DBs
Position
4383994..4384791
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AA seq
265 aa
AA seq
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MTGTGAQRRSGRAADEYADVIPLFEEMVTFDEDDPARGVLRDSLVERCLPLAEHIARRFD
GRGEAFDDLLQVARLGLVNAVDRFDPERGSDFVSFAVPTIMGEVRRHFRDAGWAVRVPRR
MKEMHLALSKATGELSQRLGRAPTAAELAAELDLDPEEVAEGLVAGNAYQAVSVDRPAPA
GDDGVTLADTLGDYDAALAHVENHEALRPLLAALPERERTVVLLRFFGNMTQTQIAERVG
VSQMHVSRLLTKTLAQLREQLGEGF
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgacggggaccggcgcccaacggcgcagcggccgagccgccgacgaatacgccgacgtc
atccccctcttcgaggaaatggtgacgttcgacgaggacgatcccgcgcgcggagtcttg
cgggacagcctggtcgaacgatgcctgcccctcgcggaacacatcgcccgccggttcgac
ggccgcggcgaggcattcgacgacctcctgcaggtcgcccgcctcggactggtcaacgcc
gtggaccgtttcgaccccgagcggggctcggacttcgtgtccttcgcggttccgaccatc
atgggcgaggtgcgccggcacttccgcgacgccggttgggcggtgcgggtgccgcgccgg
atgaaggagatgcatctggcgctgagcaaggcgaccggggaactgtcacagcgcctgggc
cgcgcccccacggctgccgaactcgccgccgagctggacctcgatccggaggaggtggcg
gagggcctcgtcgccggcaacgcgtaccaggcggtctcggtcgaccgtccggccccggcc
ggggacgacggcgtcaccctggcggacactctcggcgactacgacgccgcgctcgcgcac
gtggagaaccacgaggcactgcgcccgttgctggctgcgctgccggaacgtgagcgcacg
gtcgtgctgctgcggttcttcgggaacatgacccagacccagatcgccgaacgtgtcggc
gtgtcccagatgcacgtgtcccggctgctgacgaaaaccctcgcccagctgcgcgaacaa
ctgggcgagggcttctag
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