Rhizobium anhuiense bv. trifolii: NE851_18400
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Entry
NE851_18400 CDS
T08535
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
raw
Rhizobium anhuiense bv. trifolii
Pathway
raw03030
DNA replication
raw03430
Mismatch repair
raw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
raw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NE851_18400 (dnaE)
03430 Mismatch repair
NE851_18400 (dnaE)
03440 Homologous recombination
NE851_18400 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
raw03032
]
NE851_18400 (dnaE)
03400 DNA repair and recombination proteins [BR:
raw03400
]
NE851_18400 (dnaE)
Enzymes [BR:
raw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NE851_18400 (dnaE)
DNA replication proteins [BR:
raw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NE851_18400 (dnaE)
DNA repair and recombination proteins [BR:
raw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NE851_18400 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
McdB_C
Motif
Other DBs
NCBI-ProteinID:
UTS92926
LinkDB
All DBs
Position
1986897..1990394
Genome browser
AA seq
1165 aa
AA seq
DB search
MADTAKGSTGEATGGTPGFIHLRVHSAYSLLEGALPLKKILYKATGDSQPAIAITDTNNL
FVALEFSQKAMDEGLQPIIGCQVSIDMGDGLETEKRGGQQALVKLPSIVLLAATDAGYER
LVDLVSRAYLGGESNQAVHIKASWLEEAGTEGLIALTGAPTGPVDMAIREGHPAQAEARL
LLLKRLFGDRLYVELQRHGTYDKRHEQKIVGLAYAHDLPLVATNEAFFPTRDDYDAHDAL
MAVAHNAIVSDDSRFRLTPDHYLKSRAEMAKLFADLPEALENTIEIARRCSFVLKTRKPI
LPRFTGATDDAEEAERAEASELRRQAVEGLDMRLATLGMSPGYEEKDYRERLDFELSVIE
RMRFPGYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLN
PERVSMPDFDIDFCQDRREEVIRYVQAKYGREQVAQIITFGSLQARAALRDVGRVLEMPY
GQVDKICKLVPNNPANPTPLSKAIEEEPKLQEEAAKEPVVARLLDIAQKIEGLYRHASTH
AAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKVAVDF
VAKLGIKVDLAAIPLDDKKTYEMLSRGETVGVFQVESAGMRKALIGMKPDCIEDIIALVA
LYRPGPMENIPTYNARKHGDEELESIHPMIDHLLKETQGVIVYQEQVMQIAQVLSGYSLG
EADLLRRAMGKKIKAEMDQQRERFVVGAVKNGVSKPQADNIFELLAKFANYGFNKSHAAA
YAIVSYQTAYMKAHYPVEFLAASMTLDMSNTEKVNDFRQDAKRLGIEVIAPSVQTSFRHF
ETGDNRIYYALAALKGVGESAVDHMVEVRGDKSFASIEDFCLRIDPRQVNRRVLESLIYA
GAFDCFDMDRAQLAAGLDRVLGYAQRAQENKLSGQSDIFGSTLTSGPEKISLPPFSPWLP
SERLLKEFQVLGFYLTAHPLDSYNNILQKMRVQTFAEFSQAIKQGAANARLAGTVISKQE
RKTRTGNKMGIIVFSDSSGQFEAVLFSEMLNQYRDVLESGKSFVLTATGEERPEGIGLRI
QTIQSLEEKSLQMQKALRVYVRDSGPLRMVAGHLNAKGDGLVSFIVIKEEGKREVEVALP
EKYRITPEIAAALRAAPGVVDVELV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacggcaaagggttcaacgggtgaggcgaccggcggcacgccgggtttcatc
cacctgagggtccattccgcctattcgcttctcgagggcgctctgccgctgaagaagatc
ctctacaaggcgaccggcgacagccagccggcgattgcgatcaccgacaccaacaatctg
ttcgtcgccctcgaattctcccagaaggcgatggacgagggcctgcagccgatcatcggc
tgtcaggtctcgatcgacatgggagatgggttggaaacggaaaagcgcggcggccagcaa
gccctggtcaagctgccgtcgatcgttcttctcgccgcgaccgatgccggctacgaacgg
ctcgtcgatctcgtcagccgggcctatctcggcggcgaaagcaaccaggccgttcatatc
aaagcctcctggttggaagaggccggcacggaagggctgatcgcattgaccggcgccccg
accggcccggtcgacatggcgatcagggaaggacatcccgcccaggcggaggcccgactg
ctcttgctgaagcgtctcttcggcgacaggctctatgtcgagctgcagcgccacggcacc
tacgacaagcggcacgagcagaagattgtcgggcttgcctatgcccacgacctgccgctg
gttgcgaccaacgaggccttctttccgacgcgcgacgattacgacgcccatgatgcgctg
atggcggtcgcgcacaacgccatcgtctccgacgacagccgctttcgcctgacgcccgat
cactatctgaagagccgggccgagatggccaagctcttcgcagacctgccggaagcgctg
gaaaataccatcgagatcgccaggcgctgctccttcgtgctgaagaccagaaagccgatc
ctgccgcgcttcaccggtgcgaccgacgatgccgaggaggccgaacgcgccgaggcgagc
gagctgcgccgccaggcggtcgaagggctggacatgcggctggccacgctcggcatgtcg
ccgggttacgaggagaaggattatcgcgagcggctggatttcgagctcagcgttatcgaa
cgcatgcggtttcccggctacttcctgatcgttgccgacttcatcaaatgggccaagcag
catgacattcccgtcggtcccggccgcggctcgggcgccggttcgctggtcgcctatgcc
ttgacgatcaccgacgtcgatcccttgcgtttttcgctgctcttcgagcgcttcctcaat
cccgaacgcgtctcgatgccggacttcgacatcgacttctgccaggaccgccgcgaagag
gtgatccgctacgtccaggccaagtatggccgcgagcaggtggcgcagatcatcaccttc
ggttcgctgcaggcgcgcgccgcccttcgcgacgtcggccgcgtgctggaaatgccttac
ggccaggtcgacaagatctgcaaactggtgccgaacaacccggccaatccgaccccgctg
tccaaagcgatcgaagaggagccgaagctgcaggaggaggcggctaaggaaccggttgtc
gcgcgcctgctcgatatcgcccagaagatcgagggactttaccgccacgcctcgacccat
gccgccggcatcgtcatcggcgaccgcccgctttccaagctggtgccgatgtatcgcgat
ccgcgctccgatatgccggtcacccagttcaacatgaaatgggtcgagcaggccggcctg
gtcaagttcgacttcctcggtctgaagacgctgacggtgctgaaggtcgctgtcgatttc
gtcgccaagctcggcatcaaggtcgatctcgcggccattcctctcgacgacaagaagacc
tacgagatgctgtcgcgcggtgaaacggtcggcgtgttccaggtggaaagtgccggcatg
cgcaaggcgctgatcggcatgaagccggactgcatcgaggacatcatcgcgctggtggcg
ctctatcgtccgggcccgatggagaacatcccgacctacaatgcccgcaagcacggtgac
gaagagctggaatcgatccatccgatgatcgaccacctgctcaaggaaacgcaaggcgtc
atcgtctaccaggagcaggtgatgcagatcgcccaggtcctgtccggttattcgctgggt
gaagccgaccttctgcgccgcgccatgggcaagaagatcaaggccgagatggaccagcag
cgcgagcgcttcgtcgtcggcgccgtcaagaacggcgtgtcgaagccgcaggccgacaat
atcttcgaactgttggcgaagttcgccaattacggcttcaacaagtcgcatgccgccgcc
tacgccatcgtctcctaccagacggcctacatgaaggcgcattatccggtcgaattcctc
gccgcctcgatgacgctcgacatgtccaacacggaaaaggtcaatgacttccgccaggat
gccaagcgcctcggcatcgaggtgatcgcaccctcggtgcagacctccttccgccatttc
gaaaccggcgacaaccgcatctactacgcgctcgccgccctcaagggcgtcggcgaatcc
gccgtcgaccatatggtcgaggtgcgtggcgacaagtcctttgccagcatcgaggatttc
tgcctgcgcatcgatccgcgccaggtcaatcggcgcgtgctcgaaagcctgatctatgcc
ggcgccttcgattgtttcgatatggaccgcgcccagctagccgccggcctcgaccgcgtc
ctcggttatgcccagcgtgcccaggagaacaagctgagcggccagtcggacattttcggc
agcacgctgacctcgggacctgagaaaatctccctgccgccgttctcgccctggctcccc
tcggagcggctgctgaaggaattccaggtgctgggcttctatctcacggcccacccgctc
gattcctacaacaacatcctgcagaagatgcgggtgcagacctttgccgaattttcccaa
gcgatcaaacagggcgcggccaatgcccggcttgccggcaccgtcatctccaagcaggag
cgcaagacccgcaccggcaacaagatgggcatcatcgtcttttcggattcttccggccag
ttcgaagcggtgctgttttcggaaatgctgaaccagtatcgcgacgtgctggaatcggga
aaatccttcgtgctgacggccaccggcgaggagcggccggagggcatcggcctgcgcatc
cagacgatccagtcgctggaggaaaagtcgctgcagatgcagaaggcgctgcgcgtctat
gtcagagattccgggccgctcaggatggtggccggccatctgaacgccaagggcgacggc
ctcgtttccttcatcgtcatcaaggaggagggcaaacgcgaggtggaagtggcgctgccg
gagaaataccgcatcaccccggagatcgccgccgcccttcgcgccgcccccggtgtcgtc
gacgtcgagcttgtttga
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