Rhizobium anhuiense bv. trifolii: NE851_18615
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Entry
NE851_18615 CDS
T08535
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
raw
Rhizobium anhuiense bv. trifolii
Pathway
raw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
raw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NE851_18615 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
raw03021
]
NE851_18615 (rpoC)
03400 DNA repair and recombination proteins [BR:
raw03400
]
NE851_18615 (rpoC)
Enzymes [BR:
raw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NE851_18615 (rpoC)
Transcription machinery [BR:
raw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NE851_18615 (rpoC)
DNA repair and recombination proteins [BR:
raw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NE851_18615 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Apocytochr_F_C
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
UTS92964
LinkDB
All DBs
Position
2037082..2041290
Genome browser
AA seq
1402 aa
AA seq
DB search
MNQEVMNLFNPQVPAQNFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRISTLLDMTLKDVERVLYFENYIVTEPGLTALKEHQLLSEEEYMLAVDEYGEDQFTA
MIGAEAIYEMLASMNLEKIAGDLRSELADTTSDLKQKKLMKRLKIVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSILNQNEPGEGMAFSDLGELHHALE
SKVVTLHTKIRGRFKSIDEDGKPYSKIYETTPGRLLIGELLPKNGKVPFDICNQEMTKKN
ISKMIDTVYRHCGQKDTVIFCDRIMQLGFSHACRAGISFGKDDMVIPDAKAKIVADTESL
VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEEMMARIKAVEFDEKTGRQKPMNSIY
MMSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVTHVDCGTQTGLTMTAIVDAGQVVASIGARILGRT
ALDDIDHPITGERIVDAGKMILEPDVVEIEKAGIQSIRIRSALTCEIQTGVCSVCYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGTVQIKNRN
ILRNSDGNLVAMGRNMTVQILDERGVERSSQRVAYGSKLHVDEGDKVKRGQRLAEWDPYT
RPMMTEVAGTVQFEDLVDGLSVLEATDESTGITKRQVIDWRSTPRGSDLKPAIVIKDASG
NVAKLSRGGDARFLLSVDAILSVEPGTKVSQGDVLARSPLESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTIRLGRDYKNKRRVIIEPAEDGVEPVEYLIPKGKPFHLQEGDYIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKVE
ITDAGDSTYIVGDNVDRIELEDVNDHLIEQGKKPAYGDPVLLGITKASLQTPSFISAASF
QETTKVLTEAAIAGKTDGLQGLKVNVIVGRLIPAGTGGTMTQIRRIATSRDEMILEERRK
GTGAAVATPMLQDMAEKAPAAE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaatccgcaggtgcctgcacagaatttcgattcc
attcggatttcgatcgcgtctccggagaagatcctctcctggtcctacggtgagatcaag
aagccggaaaccatcaactaccgtacgttcaagccggaacgcgacggtctgttctgcgcg
cgcatcttcgggccgatcaaggactacgaatgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgaaaagtgcggcgtcgaagtcacgctgtcgcgcgttcgccgt
gagcgcatgggccatatcgagctcgccgctcccgtcgcccacatctggttcctgaagtcg
ctgccatcgcgcatctcgacgctgctcgacatgacgctgaaggatgtcgagcgcgtcctc
tacttcgaaaactacatcgtcaccgagccgggcctgaccgccctgaaggagcaccagctc
ctctcggaagaagagtacatgcttgccgtcgacgaatacggcgaagaccagttcaccgcg
atgatcggcgctgaggcgatctacgagatgctggcctcgatgaacctcgaaaagatcgct
ggcgacctgcgttccgagcttgccgacaccacgtcggatctcaagcagaagaagctgatg
aagcgcctgaagatcgtcgagaacttcatggagtcgggcaaccgtccggaatggatgatc
atgaaggtcgtcccggtcattccgccggacctgcgtccgctggttccgctcgacggcggc
cgtttcgcgacgtcggatctgaacgatctttaccgccgcgtcatcaaccgcaacaaccgc
ctgaagcgcctgatcgagcttcgcgcgccgggcatcatcatccgcaacgaaaagcgcatg
ctgcaggaatctgttgacgcgctgttcgacaacggccggcgcggccgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgctctccgacatgctgaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggtcgttcggtcatcgtcaccggc
ccggaactgaagctgcaccagtgcggcctgccgaagaagatggcgctcgagctcttcaag
ccgttcatctatgcccgcctcgacgccaagggttattcctcgaccgtcaagcaggccaag
aaactggtcgaaaaggaaaagccggaagtctgggatatcctcgacgaggtcatccgcgag
catccggttctcctgaaccgcgcaccgacgctgcaccgcctgggcatccaggccttcgaa
cccaccctggtcgaaggcaaggcgatccagctgcatccgctcgtctgcacggccttcaac
gccgacttcgacggtgaccagatggccgttcacgtgccgctgtcgctcgaagcccagctc
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcatccggccaacggcgcgccg
atcatcgttccctcgcaggacatggttctcggcctctactacctgtcgatcctgaaccag
aacgagccgggcgaaggcatggccttctccgacctcggcgaactgcatcacgccctcgaa
agcaaggtcgtgacgctgcacaccaagatccgcggccgcttcaagtcgatcgacgaggat
ggcaagccctactcgaagatctatgagacgacgcctggccgtctgctcatcggcgaactg
ctgccgaagaacggcaaggtgcccttcgacatctgcaaccaggaaatgaccaagaagaac
atctccaagatgatcgacacggtctatcgccactgcggccagaaggacacggtcattttc
tgcgaccgcatcatgcagctcggcttctcccatgcctgccgcgccggcatttcgttcggc
aaggacgacatggtcattccggatgccaaggccaagatcgttgccgacaccgaaagcctg
gtgaaggaatacgagcagcagtacaatgacggcctgatcacccagggcgaaaagtacaac
aaggttgtcgacgcctggggcaaggcgaccgaaaaggtcgccgaagagatgatggcccgc
attaaggcggtcgagttcgacgagaagaccggtcgtcagaagccgatgaactcgatctac
atgatgagccactccggcgcccgcggttctccgaaccagatgcgtcagctgggcggcatg
cgcggcctgatggccaagccgtcgggcgaaatcatcgagacgccgatcatctcgaacttc
aaggaaggcctgaccgtcaacgagtacttcaactcgacgcacggcgcccgcaagggtctg
gcagacaccgcgctcaagaccgccaactccggttacctcacgcgccgtctcgtcgacgtc
gcgcaggactgcatcgtcacgcacgtcgattgcggaacgcagacgggcctcaccatgacc
gccatcgtcgatgccggccaggtcgttgcctcgatcggtgctcgcatcctcggccgtacg
gcgctcgacgatatcgatcatccgatcaccggtgagcgcatcgtcgatgccggtaagatg
atcctcgagcccgatgtcgtcgaaatcgagaaggccggtatccagtcgatccggattcgc
tcggcactgacctgcgaaatccagacgggcgtctgctcggtctgctacggccgcgacctc
gcgcgtggtacgcctgtcaacatgggcgaagccgtcggcgtcatcgcagctcagtcgatc
ggtgaaccgggcacccagctcaccatgcgtaccttccaccttggcggtacggcaaccgtg
gtcgaccagtcgttcctcgaagcctcgtatgaaggtacggtgcagatcaagaaccgcaac
atcctgcgcaactccgatggcaacctcgttgccatgggccgcaacatgaccgtccagatc
ctggacgaacgtggtgtcgagcggtcgtcgcagcgtgtggcctacggttcgaagctgcat
gtcgacgaaggcgacaaggtcaagcgcggccagcgtctggcggagtgggacccctacacc
cgtccgatgatgacggaagtagccggtaccgttcagttcgaagacctggtcgacggtctc
tccgttctggaagcgaccgacgaatccaccggcatcaccaagcgtcaggtcatcgactgg
cgttcgaccccccgcggttcggacctcaagccggcgatcgtcatcaaggatgccagcggc
aatgtcgccaagctgtcgcgtggcggcgacgcccgcttcctgctctcggtcgacgcgatc
ctgtcggtcgagccgggcacaaaggtctcccagggtgacgttctcgcgcgttcgccgctg
gaaagcgccaagaccaaggacatcaccggcggtctgccgcgtgttgccgaactgttcgaa
gcccgtcgtccgaaggaccacgccatcatcgcggagatcgatggtacgatccgcctcggc
cgcgactacaagaacaagcgccgcgtcatcatcgagccggcggaagacggtgtcgagcct
gtcgaatacctgatcccgaagggcaagcccttccaccttcaggaaggcgactatatcgaa
aagggtgactacatcctcgacggtaacccggctccgcacgacatcctggcgatcaagggc
gtggaggctctggcctcctacctcgtcaacgagatccaggaagtctaccgcctgcagggc
gttgtcatcaacgacaagcacatcgaggtgatcgtccgtcagatgctgcagaaggtggaa
atcaccgatgcaggcgactcgacctatatcgtcggcgacaatgtcgaccggatcgagctc
gaagacgtcaacgatcatctgatcgagcagggcaagaagcccgcctacggcgatccggtt
cttctcggcatcaccaaggcgtcgctgcagaccccgtccttcatctcggccgcgtccttc
caggaaacgaccaaggtgctgacggaagctgcgatcgccggcaagaccgacggcctgcag
ggtctgaaggtaaacgtcatcgtcggtcgcctcatcccggccggcaccggcggcaccatg
acccagatccgccgcatcgccacgtcgcgcgacgagatgatcctcgaagagcgccgcaag
ggcaccggggctgccgttgctacgccgatgctgcaggacatggccgaaaaggctccggct
gcggaataa
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