Rhizobium anhuiense bv. trifolii: NE851_21415
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Entry
NE851_21415 CDS
T08535
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
raw
Rhizobium anhuiense bv. trifolii
Pathway
raw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
raw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NE851_21415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
raw03019
]
NE851_21415
03009 Ribosome biogenesis [BR:
raw03009
]
NE851_21415
Enzymes [BR:
raw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NE851_21415
Messenger RNA biogenesis [BR:
raw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NE851_21415
Ribosome biogenesis [BR:
raw03009
]
Prokaryotic type
rRNA helicases
NE851_21415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WHIM1
CMS1
Motif
Other DBs
NCBI-ProteinID:
UTS89168
LinkDB
All DBs
Position
complement(2574898..2576865)
Genome browser
AA seq
655 aa
AA seq
DB search
MTEFNGVVPAIAKALQKRGYAELTPVQKAMLDPALAASDALVSAQTGSGKTVAFGLALAP
TLLEGRERFGNAGAPLALVIAPTRELALQVKRELEWLYEMTGAVISSCVGGMDIRSERRS
LERGAHIVVGTPGRLCDHIRRRALDMSELKAAVLDEADEMLDLGFREDLEFILDSAPDER
RTLMFSATVPAAIAKLAKSYQRDAVRISTAAEEKQHVDIEYRALMVAPSDRENAIINVLR
YHEATNAIVFCSTRAAVNHLTARFNNRNFAVVALSGELTQNERSHALQAMRDGRARVCIA
TDVAARGIDLPGLDLVIHADLPTNPETLLHRSGRTGRAGRKGISAMIVPLNARRKAERLL
ENAGISAAWARPPSAEEVSERDDERLLADPIFNETPQEEEQGLVQQLLASHGAEKLAAAF
LRLYRTNHSAPEDLIEVTVQDERNRKRRDNAEPYEPAQKGPREDFGASVWFSISVGRKQN
AEPRWLIPMLCRNGNVTKREIGAIKMQPEETFVEIAAASAESFQAAIGPNKALERGIRVT
RLSGTPDFSRAPSPKPYAGKPSRDERPDDSFRNERPKNKFGKGPGGGYAAADNAGGERRD
SKPWSKKPGKPAFDGPKSDKPKFDKPKFEGVRSEAPRHEGKGGGPKAKFSKKKPG
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgacagaattcaacggcgtcgtcccggcgatcgccaaggcgttgcagaagcgcggttac
gccgaactcaccccggtgcaaaaggcgatgctcgatccggcgctcgccgcttccgatgcg
ctggtctcggcccagaccggttccggcaagactgtcgccttcggcctggcgctggcgccg
acgctgctcgaaggccgagagcgcttcggcaatgccggcgcgccgctcgccctcgtcatc
gccccgacgcgcgagcttgccctgcaggtgaagcgtgagctcgaatggctctacgaaatg
accggcgcggtgatatcaagctgcgtcggcggcatggacatccgcagcgagcgtcgctcg
ctcgagcgcggcgcccatatcgtcgtcggcacgcccggccggctctgcgaccatatccgc
cgcagggcgctcgatatgtctgagctgaaggctgccgtgctcgacgaggccgacgagatg
ctcgatctcggcttccgcgaggacctggaattcattctcgattcggcgccggacgaacgc
cgcaccttgatgttttcggcaacggtgccggcggcgatcgccaagcttgccaagagctac
cagcgcgatgccgtgcgcatcagcaccgcggccgaggaaaagcagcatgtcgacatcgaa
tatcgcgcgctcatggtggcgcccagcgaccgcgagaacgcgatcatcaacgtgctgcgc
tatcatgaggcgaccaacgccatcgtcttctgctcgacgcgcgctgccgtcaaccatctg
actgcgcggttcaacaaccgcaatttcgccgtggtggcgctttccggtgagctgacgcag
aacgagcgcagccatgcgctgcaggcgatgcgcgacggacgtgcccgcgtctgcatcgcg
accgacgtcgccgcccgcggcatcgaccttccgggtctcgatctcgtcatccatgccgac
ctgccgaccaatccggaaacgctgctgcaccgcagtggccgcaccggccgggccgggcgc
aaaggcatcagcgccatgatcgtgccgctgaacgcacgtcgcaaggccgagcgcctgctc
gaaaatgccggaatttcggctgcctgggcgcggccgccttcggccgaggaggtgagcgag
cgcgacgatgaacgtctgcttgccgacccgatcttcaacgaaacaccgcaggaagaagaa
caggggctggtgcagcagcttctcgccagccacggcgccgaaaagcttgccgccgccttc
ctgcgtctataccgcaccaatcattcggcgccggaggatctcattgaggttaccgtgcag
gacgagcgcaaccgcaagcgccgcgacaatgccgagccgtacgagcctgcgcagaaggga
ccgcgtgaggatttcggcgccagcgtctggttctctatctcggtcgggcgcaagcagaat
gccgagccgcgctggctgatcccgatgctctgccgcaacggcaatgtgacgaagcgcgag
atcggcgcgatcaagatgcagcccgaggaaactttcgtggagatcgccgcggcgagcgcc
gaaagcttccaggcggcgatcggaccgaacaaggcactcgaacgcggcatccgcgtgact
cggctttcgggcacaccggatttcagccgggcgccgtcgccgaaaccctatgccggcaag
ccatcccgtgacgagcgtccggacgactcattccgcaacgagcggccgaagaacaagttc
ggcaagggtccgggcggcggatatgctgcggctgacaatgccggcggggaaagacgggat
agcaagccctggagcaaaaagccgggcaagcctgctttcgatggcccgaaatccgacaag
ccgaaattcgacaaaccgaaattcgaaggcgtgaggtctgaggcccccagacatgagggc
aagggcggcggaccgaaggccaaattttcaaaaaagaagcccggctga
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