KEGG   Radiobacillus kanasensis: KO561_01390
Entry
KO561_01390       CDS       T08696                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rax  Radiobacillus kanasensis
Pathway
rax03030  DNA replication
rax03430  Mismatch repair
rax03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KO561_01390
   03430 Mismatch repair
    KO561_01390
   03440 Homologous recombination
    KO561_01390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rax03032]
    KO561_01390
   03400 DNA repair and recombination proteins [BR:rax03400]
    KO561_01390
Enzymes [BR:rax01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KO561_01390
DNA replication proteins [BR:rax03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KO561_01390
DNA repair and recombination proteins [BR:rax03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KO561_01390
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: UFT99659
LinkDB
Position
250006..250719
AA seq 237 aa
MVMNQMMQFVKQLSSRGSLNQTDPNQIAYMRQLQRELKAKDVLHIPFDQLPVVVFDIETT
GFYPDKGDSILSIGAVRMKGEGVLEEETFYSPIYHEDGPSEDIQKLTGLTAEELRSASPI
HKVLKEFFHFVKSDTLVAHHSSHEKRFMKHVAWSVLKTSFQHRLIDTSFLMKVIDPQSNL
HTLDECCEHYGIKIDQRHHALHDAKATAHLWGRCLQLTRERGFSDLKEVYTHIAQLK
NT seq 714 nt   +upstreamnt  +downstreamnt
atggtgatgaatcaaatgatgcaatttgtgaaacagttgtctagccgtggctctttgaat
caaacagacccgaatcaaattgcttatatgagacagcttcaacgagagctgaaagcaaag
gatgtcctgcatattccatttgatcagctaccggtggttgtttttgatatagaaacaacc
ggattttacccggataaaggggatagcattctttccattggagccgtccgtatgaaggga
gagggggttttagaagaagagaccttttattccccaatttatcatgaagatggcccttct
gaggacattcagaaactaacgggtttaacggctgaagagcttcggtcggcatctcctatt
cataaagtcctaaaagaattctttcattttgttaaaagtgatacgttggttgcccatcat
tctagccatgaaaaaagatttatgaagcatgttgcctggtcggtattgaaaacatccttt
cagcatcgactgattgatacctcttttctaatgaaagtaatcgatcctcaatccaatctg
catactctagatgaatgctgcgagcattacggcatcaagatagatcagagacatcatgcg
ttacatgatgcgaaagcaaccgcacacttatgggggagatgcctacaactaacaagagaa
cgtgggttttcagatttgaaggaggtttatacacatattgctcagttaaaataa

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