Radiobacillus kanasensis: KO561_02220
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Entry
KO561_02220 CDS
T08696
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rax
Radiobacillus kanasensis
Pathway
rax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KO561_02220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rax03019
]
KO561_02220
03009 Ribosome biogenesis [BR:
rax03009
]
KO561_02220
Enzymes [BR:
rax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KO561_02220
Messenger RNA biogenesis [BR:
rax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KO561_02220
Ribosome biogenesis [BR:
rax03009
]
Prokaryotic type
rRNA helicases
KO561_02220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Stimulus_sens_1
Motif
Other DBs
NCBI-ProteinID:
UFT99813
LinkDB
All DBs
Position
415751..417220
Genome browser
AA seq
489 aa
AA seq
DB search
MTTFSSLGISKPVMKALEKMGFEEATPIQEQTIPLGLEGKDVIGQAQTGTGKTAAFGIPM
IEKIDKDVKKIQGLVIAPTRELAIQVGEEIHRLGQFKGIRTLPVYGGQHMDRQIRALREG
PQIVVATPGRLLDHIRRKTINIGSVHTAVLDEADEMLNMGFIDDIRDILKAIPEERQTLL
FSATMPKEIRDIGTKLMKKPEEVKIKAKEMTVENIDQYFVEVHEKQKFDTLTNLLDIHAP
TLAIIFGRTKKRVDEVTEGLHARGFRAEGIHGDLTQGKRMSVLNKFKNGRIEILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKGGEAVSFITPREVPHLHLIEKVTK
GKIKRMQAPSMDEARRGQQQVTLDKLTSTIEKQELDAYRESATEILNQYDSVTVVAAALK
MLTKGGRRNAPVTISSVAPVSVKPAYKDKGKKKFRNDNKRNFNRKGGKPQRNRKFQNKRG
SSNFQSKKD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacatttagttcattaggaatttcaaaaccggtaatgaaagcattggaaaagatg
gggtttgaagaagcaactccaatccaagagcaaacgataccgttaggattagaaggaaaa
gatgtcattggacaagctcaaacaggtactggtaaaacagctgcgttcggtattccaatg
attgaaaaaatcgacaaagacgtgaaaaaaatccaagggcttgttattgcgccaacgcgt
gagctagctattcaagtaggtgaagaaattcatcgtctaggacaatttaaagggattcgt
acattacctgtctacggtggtcagcatatggaccgtcaaattagagcacttcgagaaggt
cctcaaatcgtcgtagctacacctggacgtcttttagatcatatccgcagaaaaacaatc
aacatcggtagtgttcatacagcagtattggatgaagcggacgaaatgctaaacatgggc
tttattgatgatattcgtgatatcttaaaagcgattccggaagaacgtcaaacgcttctc
ttctccgcaacgatgccgaaagagattcgtgatatcggaacaaagttaatgaaaaagccg
gaagaggtaaagatcaaagcgaaggaaatgacggtagagaatatcgatcaatactttgta
gaagtacacgaaaaacagaaatttgatacgctgaccaaccttcttgatatccatgcaccg
acattagcaattattttcggacgtacgaaaaaacgtgtagacgaggttacagaaggattg
catgctcgtggatttagagcggaaggaattcacggcgatctaacgcaaggaaaaagaatg
tcagttttaaacaagtttaaaaacggtagaatagaaattcttgttgcaacagatgtggca
gcgagaggtctagatatctctggtgttacccatgtgtacaattttgatatcccacaagat
ccagaaagctatgtacaccgtatcggtcgtacaggaagagctgggaaaggtggagaagca
gtttcctttattactccaagagaagtgccacatttgcacttaattgaaaaagtaaccaaa
ggaaagatcaaacgcatgcaagctccgtctatggatgaagcgagacgtggtcaacaacaa
gttacattggataaattaacgtccaccattgaaaaacaagagttagatgcatatcgggag
tctgcaacggaaattttgaatcaatacgattctgtaacggttgtagcagctgcgctgaag
atgctaacgaaaggtggtcgtcgcaatgcacctgttacgatcagctccgtagcaccggta
agtgttaaaccggcttataaagataaaggcaagaagaaattccgtaacgataacaaacga
aactttaatcgaaaaggtggcaaaccacaaagaaatagaaagtttcaaaataaacgtggt
agctccaacttccaatctaaaaaagattaa
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