Radiobacillus kanasensis: KO561_08605
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Entry
KO561_08605 CDS
T08696
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rax
Radiobacillus kanasensis
Pathway
rax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KO561_08605 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rax03400
]
KO561_08605 (priA)
Enzymes [BR:
rax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KO561_08605 (priA)
DNA repair and recombination proteins [BR:
rax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KO561_08605 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
PriA_CRR
Helicase_C
DUF6699
T2SSE
AAA_19
SLFN-g3_helicase
AAA_30
TrwB_AAD_bind
Flavi_DEAD
AAA_16
NB-ARC
PIF1
CBP4
zinc-ribbons_6
zf-ISL3
zinc_ribbon_12
Motif
Other DBs
NCBI-ProteinID:
UFU00979
LinkDB
All DBs
Position
1647790..1650198
Genome browser
AA seq
802 aa
AA seq
DB search
MTIARVVVDVPSSQTDRIFDYRIPERFEAAIQEGMRVIVPFGPRKIMGYVLEITDHTELE
KVRDIESVMDITPVLTKELIQLGKWMSNHTLSFYISSFQVMLPQVLKAKYKKELHRLTEE
DLPEDLQQLFAGRDYLDFDEVEKSSIPLSRVQRLIQEGLLEVNYQVDSKETKKYETIIAR
KGSLLELEEAMVDLPKQATKQWDILRYFSEKEVEEVSQKALLSILKTTRASVKPLLDKGI
LRKYKKEIYRNPYKVDYPKTTALPLTEQQQEAKDAIQANLAKREHEVFLLHGVTGSGKTE
VYLQAIQEVVDRGQEAIVLVPEISLTPQMVERFKGRFGSHVAVLHSALSAGEKYDEWRKI
QRKEVKVAVGARSAIFAPFENIGIIIIDEEHESSYKQDDHPRYHARDVAIYRGQHHRCPI
ILGSATPTLESFARAKKGVYQLLSLPDRMNKAAMPEVQVIDMREELHAGNRSMFSKPLIS
AIEDRLEKKQQIVLFLNRRGYSTFVMCRDCGHVMECPHCDIALTYHRTQNKLKCHYCSYE
ENMPLQCPECSSDTIRYFGTGTQKVEEALTKLLPEARVIRMDVDTTRRKGAHEALLTKFA
NHEADILLGTQMIAKGLDFANVTLVGVLAADTMLHLPDFRAAEKTFQLLTQVSGRAGRHT
LPGEVIVQTYTPEHYSIQLASTYKFETFFQQEMQVRRAFHYPPYFYLTLITVSHPNQVKA
MDVTKQIAQALSQTLTQQSTILGPTPSPIARIKNRYRYQCVIKYKNEPNQRENLKKILQK
YEADIQKNDLLISVDLQPSQLM
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
gtgacaattgcaagggtagtggtggatgttccatcaagtcaaaccgaccgaatctttgat
tatcgcattccagagcgtttcgaagcagctattcaagaggggatgagagtaatcgttccg
tttggtccacggaaaattatgggctatgtgctggagattaccgatcatacagagcttgaa
aaagtacgagacattgagagtgtcatggatattacgcctgtactaacaaaggaactaatc
cagttaggtaaatggatgtccaatcatacacttagtttttatatttcttcctttcaagtg
atgctaccacaggttttaaaagcaaaatacaaaaaagaattgcatcgcttgactgaggag
gatttaccagaggacttgcaacaattatttgcaggaagggactatcttgattttgatgaa
gtggagaagagctcgatcccattaagtcgtgtacaacgactcatccaagaaggtttgcta
gaggttaattatcaagtagactcaaaagaaacgaaaaaatatgaaacgataattgctaga
aagggatcattgttagaattagaagaggcgatggtcgatttaccgaaacaagcaacgaaa
caatgggacatccttcgatacttttcagaaaaagaggtagaagaagtaagtcagaaagcg
ttgttgtctatactgaaaacaacaagagccagtgtaaaacctttgctagacaaaggaata
ctgcgaaagtataagaaggagatttaccgtaatccgtataaagtggattatccgaagaca
acagcacttccactcacggagcaacagcaggaagcgaaagatgcgatacaagccaatctt
gcaaagcgagagcacgaggttttccttttacatggtgtcaccggaagtgggaaaacagag
gtgtacttgcaagccattcaagaagtagtcgatcgtggacaagaagctattgtactagtt
cctgaaatttcgctcactccacaaatggtagagcgatttaaaggtagatttgggtcacat
gtagcggttctacatagtgccttatctgctggggagaaatacgacgaatggcggaagatt
caaagaaaagaagtgaaagtcgctgttggcgcacgttctgcaatctttgctccgtttgaa
aacattgggattatcattattgatgaagagcatgaatctagttataagcaggatgatcat
ccacgttaccatgcacgtgacgtagcgatttatcgtggacaacatcaccgttgccctatc
attttaggaagtgctacaccgactcttgaatcctttgctcgtgctaaaaaaggagtctat
cagctactttccttaccagatcgcatgaacaaggcggccatgccagaggttcaagtcatc
gatatgcgagaagaattgcatgccgggaacagatctatgttttctaagccattaatttcg
gctattgaggaccgattagaaaagaaacagcaaatcgttcttttcttaaaccgaagaggg
tattcgacatttgtaatgtgtagagactgtggtcatgtgatggaatgcccccattgcgat
attgcattaacgtatcatagaacccagaacaagctaaaatgtcattattgttcgtacgag
gaaaatatgcccttacaatgtccggaatgttctagtgatacgattcgttattttggtacg
ggtacccaaaaagtagaagaagcgttgacgaagcttctacctgaagctcgtgtaattcgt
atggatgtcgatactacgagaagaaaaggagcacatgaagcgctccttaccaagtttgcg
aatcatgaggctgatattttactaggtacacagatgatagcgaagggattagattttgca
aatgtgaccttagttggggttcttgctgctgatacgatgctacatctaccagatttccgg
gctgctgagaagacttttcaactattaacacaagtaagtgggagagctggaagacatact
ttaccaggtgaggttattgtacaaacatacactccggagcattacagcatccaattagcg
agcacgtataaatttgagacgtttttccaacaggagatgcaggtaaggagggcgtttcat
tatcctccatacttttatttaacacttatcacggtatctcacccgaatcaagtgaaagcc
atggatgtaacaaagcaaattgcccaagctttatcgcaaaccttaactcagcaatccacg
atcttagggccaactccatctccaattgcgagaatcaaaaatagatatcgctatcaatgc
gtgataaaatacaaaaacgaacctaatcaaagggaaaacttgaaaaaaatcttacagaaa
tatgaagcggatattcaaaagaatgacttattaattagtgtagatttacaaccaagccag
ctcatgtag
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