Radiobacillus kanasensis: KO561_11315
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Entry
KO561_11315 CDS
T08696
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
rax
Radiobacillus kanasensis
Pathway
rax02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rax00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KO561_11315 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rax03021
]
KO561_11315 (rpoD)
Transcription machinery [BR:
rax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KO561_11315 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2408
Motif
Other DBs
NCBI-ProteinID:
UFT97804
LinkDB
All DBs
Position
complement(2167772..2168893)
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AA seq
373 aa
AA seq
DB search
MAQNKPSQPKENETELTLDQAKEQLLELGKKRGVLAYEEVAERLSNFELESDQMDEFYEH
LNEQGVEVIGESEEDPSMQQLSKEEEFDLNDLSVPLGIKINDPVRMYLKEIGRVDLLSAA
QEIELAKRIEDGEEEAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKF
DYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPS
PEEIGKEMELTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYEL
LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaacaagccatcacagccaaaagaaaacgaaacagagctaaccctagatcaa
gctaaggaacagttgttagagctaggtaaaaagcgtggagttcttgcttatgaagaagta
gcagagcgattgtcaaactttgaattggaatccgatcaaatggatgaattttatgagcac
ttaaatgaacaaggggtggaagtgattggggaatctgaggaagacccaagcatgcagcag
ctttctaaggaggaagaattcgacctaaatgatttaagtgttccacttggtattaaaatt
aatgacccagttcgtatgtacttaaaagaaattggaagagtagacctattgtctgctgct
caagaaattgagcttgcaaaacgtattgaagacggtgaggaagaagcgaaaaaacgactt
gctgaagcgaaccttcgtttagtagttagtattgcaaagcgctatgtaggtcgaggaatg
cttttcttagacttgattcaggaaggaaacatgggtcttattaaggcagttgaaaaattt
gattaccgcaaggggtacaagtttagtacgtatgccacttggtggatacgtcaagcgatt
acgagagctatcgcagatcaggcaagaaccattcgtattcctgtacacatggtagaaacg
ataaataaactgatccgagtacaaagacagctgcttcaggatttaggtcgtgagcctagc
ccagaagaaatcggaaaagaaatggagttaacacctgaaaaggtacgagaaatcttaaag
atagctcaagaacctgtttccttagaaacaccgatcggtgaagaagatgattcacatcta
ggtgattttatcgaagaccaagaagcaacttccccttctgaccatgctgcttatgagttg
ttaaaggaacaattagaagatgtgttagatactctaacagatcgggaagaaaatgtactt
cgtttacgctttggattagacgatggacgtacacgaacacttgaagaagtgggtaaagtg
ttcggagttacgagagaaagaattagacaaattgaagctaaggcactaagaaagctacga
cacccaagtcgaagcaaacgtcttaaagatttccttgaataa
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integrated database retrieval system
