Radiobacillus kanasensis: KO561_13520
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Entry
KO561_13520 CDS
T08696
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rax
Radiobacillus kanasensis
Pathway
rax00300
Lysine biosynthesis
rax00470
D-Amino acid metabolism
rax01100
Metabolic pathways
rax01110
Biosynthesis of secondary metabolites
rax01120
Microbial metabolism in diverse environments
rax01230
Biosynthesis of amino acids
Module
rax_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rax00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KO561_13520 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KO561_13520 (dapF)
Enzymes [BR:
rax01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KO561_13520 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
UFU01405
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All DBs
Position
complement(2603073..2603939)
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AA seq
288 aa
AA seq
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MMNIPFTKMHGLGNSYIYVDLYQTTLKEDQLPAIARYISNVNTGIGSDGLILIGPSEQAE
VSMRIFNKDGSEGKNCGNGLRCVAKYAYEHHLVSETTFTIETLSGNVTAHVHESGNVVEE
VTVDMGIPHLRRKEIPMVGADVEQIIAEPFVVSEQELEVTAVSMGNPHAIFYVEDIEKAP
LQTLGPTITKDERFPEGVNVEFVQVVSDKEVHFRVWERGSGITQACGTGACAAGVASVLN
GFSEKGKEVCVHLSGGDLFITWGDDDHVWMRGKAETVATGRFQWNQKS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ataatgaacatcccatttacaaagatgcacggtttaggaaatagctatatttatgtagac
ttataccaaactacgttaaaagaagatcaactacctgccatcgctcggtacatttctaat
gtgaataccggaatcggttcagatggattaattttaatcgggccgagtgaacaagcggaa
gtgtcgatgcgtatttttaataaagatgggtcagaaggaaaaaattgcggaaatggtctt
cggtgtgttgcaaagtatgcatatgagcatcatttagtttctgagaccacatttacaatt
gaaacgttatcagggaacgtgacagctcatgttcacgaatccggaaatgttgttgaagag
gttactgtagatatggggattcctcatttgcgaagaaaagaaataccgatggtcggtgcg
gatgtagagcaaattattgcagagccatttgttgtttcagaacaggaattagaagttacg
gctgtatcgatgggaaatccgcatgccattttttatgtagaagatatagaaaaagctcct
ttgcagacattaggtcctacaattacaaaggatgagcgttttccagagggagttaatgta
gaatttgttcaagttgtttccgataaagaagtgcatttccgtgtttgggaaagaggctct
ggtattacacaagcgtgtggaacaggtgcttgtgcggctggtgttgcttctgtgttaaat
gggttttcggaaaaaggaaaagaagtgtgtgtccatttaagtggaggagatttgttcatc
acgtggggcgacgatgaccacgtatggatgagaggtaaagcagaaacagttgctacaggt
aggttccaatggaatcagaaaagttga
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