Radiobacillus kanasensis: KO561_18305
Help
Entry
KO561_18305 CDS
T08696
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rax
Radiobacillus kanasensis
Pathway
rax03420
Nucleotide excision repair
rax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KO561_18305
03430 Mismatch repair
KO561_18305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rax03400
]
KO561_18305
Enzymes [BR:
rax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KO561_18305
DNA repair and recombination proteins [BR:
rax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KO561_18305
MMR (mismatch excision repair)
Other MMR factors
KO561_18305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
PhoH
SLFN-g3_helicase
DEAD
NACHT
Motif
Other DBs
NCBI-ProteinID:
UFT99108
LinkDB
All DBs
Position
complement(3594309..3596654)
Genome browser
AA seq
781 aa
AA seq
DB search
MAETDKDWQEEQDRVRFVIHEIKRKLKKIKERTSDLKDRVIDLRKNFWDDVTVNLDEIDD
VIETQASLKQQAEFLSERERSHGQLSQQLKTLQRLQESPYFGRIDFQEEGESKLESIYIG
IASMMDKHDEDFLIYDWRAPISSLYYDYPPGEAEYKTMDGTIHGEITLKRQFIIRNQEIK
GMFDTGLTIGDHLLQAVLGNNANTKMKSIVATIQKEQNKIIRNEKSKLLIVQGVAGSGKT
SAALQRVAYLLYRYRETLSADNMVLFSPNPLFNSYVATVLPELGEENMKQTTFHEYLVRR
LGKQFSLESPFEQMEYYLTESDQDTYQARLAGIQWKASLDHKQQIDRYVDDLGKKGIQFR
NISFRGQKLISSAKIRDYFYSLDHTMSIPNRLEEVSKWLMEKIKVFEQNERKEDWVLEES
QLLDKEDFLQVYQEMQDEDEYSDDPFFNYAREEQLLRKKVVSDKLKPLKRKVKKFFFLDV
RKTYTKLFELEKYKVKQVPLWDEIAALTIEQLKKKSLTWEDATPYLYFQDKLLGYRENTA
IQHVFIDEAQDYSPFQFAYFRQVYPNSRMTLLGDINQAIYAHALHSDTLLTSEVEEKQER
ITLQRSYRSTKPIVEFTKSFMPNGDQIEAFNREGEKPKVYEVDDDYTRNQMLVNHLEEWQ
KEYQTIAVICKTKQESLDVYNRLNSSLPVKLIDEETFTFQKGLVVIPAYLAKGIEFDAVI
VFDASNDQYDTELEKNLFYTACTRAMHALTVFSLGPYNRFIEEIPDEYFHHYKVHSYYRK
Q
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacagataaggactggcaggaggaacaagaccgagttcgttttgtcattcat
gaaatcaaacgaaaattaaagaaaataaaagaacgaacaagtgatttgaaggatagggtt
atcgaccttcgtaaaaacttctgggacgatgtcacggttaacttagacgaaatcgatgat
gtgattgaaacccaagccagcttaaaacaacaggctgagtttttatctgagcgcgaaaga
agtcatggccaattaagtcaacaattaaaaacgcttcaacgattacaggaatcgccttac
tttggaaggattgactttcaagaagagggtgagtctaagctggaatccatttacatagga
attgcatcgatgatggataaacacgatgaggattttcttatttacgattggagagctccc
atttccagtctgtattatgattatcccccaggtgaagcggagtacaaaaccatggatggt
accatccatggtgagattactctaaaaagacagttcattatacgcaatcaagaaattaaa
ggaatgtttgatacaggcttaaccataggagaccatctgctgcaggccgtgttagggaac
aatgccaatacgaaaatgaaaagcattgtagcaaccatccaaaaagaacaaaataaaatt
atccgaaatgaaaaaagcaagttgttaattgttcaaggggttgcgggaagtgggaaaaca
tcggctgccttacagcgcgtcgcttatttattataccggtatcgggaaacactttcggcc
gataatatggttcttttttcaccaaatcctctgtttaacagttatgtagctacagtactt
ccggaattaggcgaagaaaacatgaagcaaacaacattccatgagtacttagttcgtcgc
ttaggaaaacaattttcgcttgaatcgccgtttgaacaaatggaatattatttgacggaa
tcagatcaggacacgtatcaagctcgattagcgggcattcagtggaaggctagcttagac
cataaacagcaaattgatcgttatgtggatgaccttgggaagaagggaattcaattccgt
aacattagctttagagggcaaaagctcatttcgagtgcaaaaataagagattacttctat
tccttagatcatacgatgtcaattccgaatcgtttagaggaagtatcgaaatggttaatg
gaaaaaataaaagtattcgaacagaatgaacggaaggaagactgggttctagaggagagt
cagctactggataaagaggatttccttcaagtgtatcaggaaatgcaggacgaagacgag
tattcggacgatccgttttttaactatgcacgagaagaacaacttcttcgaaaaaaggtt
gtttccgataaattgaagccgttaaaacggaaagttaaaaagttttttttcttagatgtg
cgaaaaacctatacgaaactatttgagttagaaaaatataaagtaaagcaagtcccgctc
tgggatgagattgcagccttaacgatcgaacagcttaaaaagaaatcactaacctgggaa
gatgctacaccgtatctatacttccaagacaagttgcttggctaccgcgaaaatacagca
attcagcatgtgtttatcgatgaagcacaggattattctccttttcagtttgcttacttc
agacaggtgtacccgaatagcagaatgacgctactaggggatattaaccaagctatttat
gcacatgctcttcattcggatacattactaacgagtgaagtagaggaaaaacaggaacga
ataacattacaaagaagttatcgttctacaaaaccaatcgtagaatttacaaaatccttt
atgcccaatggggatcaaattgaagcctttaaccgagaaggtgaaaagccaaaggtctat
gaggtagacgatgattatacgagaaaccaaatgttagttaatcatctagaagaatggcaa
aaagaatatcaaaccattgccgtcatttgtaaaacaaagcaagaaagcttagatgtctat
aaccggttgaattctagtttgccggttaagctgatagacgaagaaacgtttacgttccag
aaggggttagttgtaattccagcttacttagccaaggggattgagtttgatgcggttatc
gtctttgatgcatctaatgatcaatacgacaccgaattggagaagaatctcttttataca
gcttgtacaagagcaatgcatgcccttactgtattttcgcttggaccttataaccgattt
attgaagagattccagatgaatatttccaccattacaaggttcattcctactaccgaaag
caatag
DBGET
integrated database retrieval system
