Rousettus aegyptiacus (Egyptian rousette): 107497225
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Entry
107497225 CDS
T06036
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray04151
PI3K-Akt signaling pathway
ray04510
Focal adhesion
ray04512
ECM-receptor interaction
ray04820
Cytoskeleton in muscle cells
ray04926
Relaxin signaling pathway
ray04933
AGE-RAGE signaling pathway in diabetic complications
ray04974
Protein digestion and absorption
ray05146
Amoebiasis
ray05165
Human papillomavirus infection
ray05200
Pathways in cancer
ray05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107497225 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107497225 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107497225 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107497225 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
107497225 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
107497225 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107497225 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
107497225 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
107497225 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
107497225 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
107497225 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ray04147
]
107497225 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
ray00536
]
107497225 (COL4A4)
Exosome [BR:
ray04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107497225 (COL4A4)
Glycosaminoglycan binding proteins [BR:
ray00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107497225 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107497225
NCBI-ProteinID:
XP_015974313
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MHVKLVRCFFRRTKSLATNPWLFIFILFSAQHVYGSGKKFIGLCGGRDCSVCQCFPEKGS
RGQPGPPGPQGPIGPLGPPGPIGLAGEKGMRGDSGPPGAAGDKGDKGPTGVPGFPGLDGI
PGHPGPPGSRGKPGVNGYNGSRGDPGFPGERGAPGPGGPPGIPGENGEKGNSVFIFGAVK
GVQGDRGDPGPPGLPGPRGSRGPAGPVGHPGEPGFAGPPGHRGSPGLKGNPGVGVKGQMG
DPGEVGQQGSPGPTLLIQPPDFCLYKGEKGVKGIPGVIGPPGPPGPKGEPGVGAKGEKGI
PGFPGPRGDPGSHGSPGFPGFKGEPGVFGDPGPFGFLGPKGDSGDRGYPGPPGLLATPPL
PLRGPPGEPGLPGRYGEMGAVGSPGPPGPAGRPGEACAGIMGHPGPRGIPGHPGLPGAAG
LPGKPDSAPGKPGDPGPPGLPGAPGLQGPPGSDVIYCSVGHPGPQGIKGKMGPPGRRGSK
GEKGNAGLCACKPGPMGSPGPPGLPGRQGSKGDLGLPGWLGEKGHPGPPGAEGSPGPPGE
SGASGPPGNKGEKGDAVVSRVKGRKGERGPDGPPGFPGQPGQHGWDGHAGEKGDPGLPGD
HEDAIPGDQGFPGPPGFPGREGPRGPPGLGFPGPPGERGQRGDPGRPGERGPDGMKGQKG
GTISCNVTYPGRPGPPGFDGPPGPKGFPGPRGAPGLRCFDGQKGRRGRPGLSGIPGPPGF
RGDMGDPGLGGEKGSSPVGPPGSPGLPGENGQKGIAGDPAYGHPGPPGKRGLSGAPGLKG
LRGEPGHPGLAGPAGIPGSPGLKGPKGREGSPGFPGIPGSPGHSCERGAPGIPGQPGLPG
APGSPGDPGWKGQPGDVGPPGPGGMKGLPGVPGRPGADGPSGPPGIPGPSGDDGRPGLPG
PKGPQGLPGFQGFPGERGKAGPEGHPGRKGEAGEEGWPGFLGDPGVRGAKGERGPPGDEG
EMALISKKGAVGEPGPPGDGGFQGQEGDKGSPGVPGRKGEPGRHGPPGFHRGEPGRNGQP
GLLGPPGPPGSPGLRGIIGFPGFPGDQGEPGPPGPPGLAGIDGTRGPKGTKGEPASWFGP
RGPSGEPGSPGCPGHFGVPGEKGLPGVPGQEGPPGRPGLPGPSGPPGCPGNQGVPGPMGQ
PGEMGDPGPRGLMGDPGTPGLPGIKGPVGLPGLDGLHGLKGQKGTKGASGLNEVGPPGPV
GIPGLKGETGDPGSPGISPPGLCGERGLPGPPGRPGPPGPAGATGRVPKGDIPCPGPPGD
QGLPGPDGPRGAPGPPGPPGSIDLLQGEPGDYGLPGPPGPPGPPGPPGQKGFPGCDGKDG
QKGPVGLPGPQGPHGLPGSPGEKGLPGPPGSQGPSGPPGSRGEQGPPADLEACPRIPGLP
GVPGPRGPEGELGLPGMRGPPGPGCKGEPGPDGRRGQDGVPGSPGPPGHTGDIGEAGCPG
APGPPGPIGDPGPKGFGPGYLSGFLLVLHSQTDGEPTCPAGMPRLWTGYSLLYLEGQEKA
HNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMMPLAEEDIRPY
ISRCTVCEAPAQAVAVHSQDQSIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALTSPGSC
LEDFRAAPFLECQGRQGTCHFFANEYSFWLTAVKPHSQFSVAPSPDTLKDSQAQRQKISR
CQVCVKMS
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgaagctagtgagatgcttcttcaggaggaccaagtccctggccacaaatccc
tggttgtttatatttattctcttttctgcacaacatgtatatgggagtgggaagaagttc
attggcctttgcggaggaagagattgctctgtttgccagtgctttcctgaaaaggggtct
cggggtcaaccgggaccaccagggccacagggtcctattggacccctgggaccaccagga
cccattgggcttgcaggagagaaaggaatgagaggtgacagtggccctcctggagcagcg
ggtgacaaaggagataagggtccaactggtgttcctggatttccaggtttggatggcatc
cctgggcacccagggcctcctggatccagaggcaagcctggcgtgaatggctacaatggc
tcgagaggtgatccggggtttccaggagaaagaggagcccctggcccgggtggccctcca
ggcattcctggagaaaatggagaaaaaggaaattcagtgttcattttcggtgccgttaaa
ggtgtccagggtgacagaggggacccaggacctcctggcttaccaggacctaggggttcg
agaggacctgcaggcccagtgggacatccaggagagccggggtttgcaggaccccccggc
caccgtgggagtccaggtttgaagggtaatcctggtgtgggagtaaaagggcaaatggga
gacccgggcgaggttggccagcaaggttctcctggacccaccctcctgatacagccaccc
gatttttgtctctataaaggagaaaagggtgtaaaagggattcctggagtgattggacct
ccaggaccaccaggacccaagggagaacccggagttggggcaaaaggagagaagggtatt
cctgggttcccaggccctcggggtgaccctggctcccacggatctccaggtttcccggga
ttcaagggggagccaggagtgtttggagatcctggaccgtttggatttcttggcccaaag
ggggattctggagaccgtgggtacccggggccaccaggacttttggcaactccacctctt
ccactcagaggtcctccaggagagccaggcctccctggacgctatggagaaatgggggct
gtcggatcccccggtccccctggtcccgcaggtagaccaggggaagcctgtgcaggcata
atgggacaccctggaccgcgagggattcctggtcacccaggattaccgggggcagctggt
cttcctgggaaacctgattctgctccaggaaaaccgggggacccgggaccacctgggtta
cctggagcaccagggctgcaggggcctccaggatcagacgttatatattgtagtgttggg
cacccgggaccacaaggaataaaaggcaaaatgggtcctccaggaagaagaggctcaaaa
ggagaaaaaggaaatgcggggctctgtgcctgcaagcccggccccatgggctcaccaggc
cctccaggacttcctgggaggcagggtagtaagggagacttggggctcccagggtggctt
ggagaaaaaggtcacccaggccctcctggtgctgaaggatctccagggccaccaggagaa
tctggcgcctcaggaccacctggcaacaaaggagaaaagggtgacgcggttgtatcaaga
gtcaaaggacgcaaaggagaaagagggcctgatgggcccccgggatttccagggcagccg
ggacaacatggctgggatggacatgctggagagaagggggacccaggactcccaggggat
catgaagacgcaatcccaggtgaccaaggatttcctggaccaccaggtttccctggcaga
gaaggacctagggggcccccaggactggggtttcctggtcccccaggagaaaggggccaa
cgaggagatccaggccgaccaggcgagaggggcccagatggcatgaagggtcagaaaggt
ggtacaatttcttgtaatgtcacctaccctgggaggccaggccctccaggttttgatgga
cctccaggtccgaagggattcccgggtcctcggggcgctcctgggctgaggtgttttgat
gggcaaaaaggtcggcgtggcagaccaggactgtcaggcatacctggcccacctggtttt
cgtggtgacatgggagatccaggtttgggaggtgaaaaggggtcctctcctgtcggaccc
ccgggctcccccggtttacctggagaaaatggtcagaaaggaatcgctggagaccctgct
tatggccacccaggacccccaggaaagagaggtctttcaggggcaccaggattgaaagga
cttagaggtgaaccaggacatccggggctggcaggaccagctggcattcccggatcccca
ggtctcaaaggtcccaaaggcagagagggaagccctggatttccaggcatcccaggctca
cctggccattcctgcgaaaggggtgcccctgggataccagggcaaccgggactccccggg
gctccaggcagtccaggtgaccctggttggaaaggacagccaggggatgtggggcctcct
ggacccggtggaatgaagggcctcccaggagtcccgggacggccgggggcagatggaccc
tcaggacccccgggaatcccaggcccctctggggatgatggacgacctggtcttccaggc
ccaaaaggaccccaggggctgcctggcttccaaggttttccgggagagagaggtaaggct
ggcccagagggacaccctggccggaaaggagaagctggagaggaaggttggcctggcttc
ctcggagacccgggggtgagaggcgccaaaggcgagagaggacccccaggcgatgaagga
gaaatggctctgatttccaaaaaaggggcagtcggggaacctggccctcctggagatggc
ggattccagggacaagaaggtgacaaaggcagccccggggtgccagggaggaaaggagag
ccaggaagacacgggccacccggatttcacagaggagagcctgggcgaaatgggcagcca
gggctgctgggccccccaggccccccgggctcacctgggctgagagggatcatcggtttt
ccgggatttccaggtgaccagggtgaaccgggtcctccagggccccctggacttgcagga
attgatggaacaagaggacctaaaggaaccaaaggtgagcctgcaagttggttcggccca
cgcggtccaagcggtgagcctgggagccctggatgtccagggcattttggagtccccgga
gagaagggcttgcctggtgttccagggcaggaaggaccaccaggaaggccagggttgcct
ggcccctcgggaccaccaggatgtccaggtaatcaaggggtgcctgggccaatgggacag
ccaggagaaatgggggatcctggaccaagaggcctcatgggggatccagggacaccaggt
cttccaggcataaaaggtcccgtggggttacccggcctggatggcttgcatggtctaaag
ggccagaaaggaaccaaaggtgcttcaggcttgaatgaagtgggcccacctggtccagtt
ggaatacctggcctgaaaggggagacaggtgaccctgggagcccaggaatttctcctcca
gggctttgtggagaaagaggactcccaggccccccaggaagacctggcccacctggtcct
gcaggtgccacaggaagagttcctaagggcgatattccttgtccgggtccacctggagat
caagggcttcctggccctgatggtccaagaggagcacctgggcctccagggccccctggg
agtattgaccttctgcaaggggaaccaggtgactatggtctgccagggcctccagggccc
ccgggcccaccaggccctccaggacaaaaaggcttcccaggatgtgatgggaaagatggc
cagaaaggaccagtgggactcccggggccacaggggccacatggacttcctgggtcacct
ggagagaagggtttacctggccctccaggcagtcaagggccctctggtcctccaggttcc
agaggtgaacaggggccacctgcagatttggaggcctgcccccgaatcccgggacttcct
ggagtgccaggcccacgaggacccgaaggagaattggggctccctggaatgagaggcccc
ccgggaccagggtgcaaaggagagcccgggccggatggcaggaggggccaggatggcgtg
ccagggtcccctgggcctccgggacacacaggcgacataggagaagccggctgccctgga
gccccaggccctcctgggcccatcggggatcctgggcccaaagggtttggccccggatac
ctcagcggcttcctcctggttctccacagccagacggacggagagcccacgtgccccgcg
ggcatgccccggctctggaccggctacagtctcttatacctggaaggacaggagaaagcc
cacaaccaggatctcggtctggcggggtcttgcctccccgtgtttagcactctgcccttc
gcctactgcaacatccaccaagtgtgccactatgcccagaggaacgacaggtcctactgg
ctggccagcgccgcgcccctgcccatgatgccgctggcggaggaggacatccggccgtac
atcagccgctgcactgtgtgcgaggcccccgcccaggcggtggccgtgcacagccaggac
cagtccatacccccgtgtccacgcgcctggaggagcctctggatcggctactccttcctg
atgcacacaggagctggggaccaaggaggagggcaggccctcacgtcacctggcagctgc
ctggaggacttccgagcagccccgttcctcgagtgccaaggtcggcaaggaacttgccat
ttctttgccaatgagtatagcttctggctgacagcagtgaagccacactcgcagttttct
gtggcgccgtcaccagacaccttaaaagacagccaggctcagcgccagaaaatcagcagg
tgccaggtctgtgtgaagatgagctag
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integrated database retrieval system
