Rousettus aegyptiacus (Egyptian rousette): 107497338
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Entry
107497338 CDS
T06036
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107497338 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ray03019
]
107497338 (PATL1)
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107497338 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
107497338 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
107497338
NCBI-ProteinID:
XP_015974513
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVSEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPLLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQDMPAVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCNV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPSQQHPPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGDGPKKERTKLITPQVARLEHTYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIENTYSLLLDVEDY
ERRYLLSLEEERPALTDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMITARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQL
MNLPQSAAAPAPANPHLTAVLQSQFGLSLLLVVLSRGEDLQSSDPATEPTENNQWKEVMF
MATRELLRIPQVALAKPVSIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagacgaggatgcatttcag
ggcctgggagaggaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgactggctgaattggaggagaagcta
ccagtggcagtcagtgaacaaacaggcaatggagaaagggatgagatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaactagaa
gatccagctattatgagggcagtgcagactaggccacttttgcaaccccaaccaggaagt
ctcaattctagcatctgggatggatctgaagttctgaggcgaatcagaggaccactcctt
gctcaggacatgcctgccgtgtctgtactagaatatgccttgcctcagaggcccccacag
ggcccagaggatgatcgggacctttctgagcgagcattaccaaggcggtcaacttcacca
atcattgggagccctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtacccagcttcaaccaacagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccaccacgctatcctgctccctatggtgagaggatgtctccaaaccagctctgcaatgtc
ccgaactcttccctactgggtcacccttttcctcctagtgttcctcctgtcctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccacttgctgccatgaatcccaagttg
ctgcaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccgccccctgctacaccaccaccctcacagcagcacccccctggcccaggacctcac
ctacaaaacctaagatctcaggccccaatgtttagaccagacaccactcacctccatcca
cagcaccgtcgactcttgcatcagagacagcagcagaatagaaatcagcaccggaatctc
aatggtgcaggagatagaggaagtcaccggagcagtcatcaagatcacctccgaaaggat
ccgtatgccaatctcatgttgcagcgagaaaaggattgggtctctaaaattcagatgatg
caactgcaaagcactgatccctacctggatgatttttattaccagaattactttgaaaaa
ctggagaaactgtcagctgctgaagaagtgcaaggtgatggccctaaaaaggagcgcacc
aagctcattacccctcaggtggccagactggagcatacctataagccagtgcagtttgag
ggctctttgggaaagcttactgtctctagtgtgaataatccccggaaaatgattgatgct
gttgtgacatctcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaagaga
cgaaaaacccttgtcataattgagaatacctacagtttgctccttgatgtggaggactat
gaaaggcgttatctcctaagtctggaagaagagagacctgccctcacggatgaaagaaag
cacaaaatttgtagcatgtatgacaacttaagggggaaattgcctggtcaagagaggcca
agcgacgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggtcgcccgt
attcttcctttcctctccacagagcaagcagccgacatcctcatgataacagccaggaac
ctccctttccttatcaagaaggacgcacaggatgaggtgctgccatgcttattgagtccc
ttctctctcctcctctatcatcttccatcagtgactgtcaccagccttctgcaacagctg
atgaacctacctcagagtgcagctgcaccagctcccgccaaccctcacctcactgctgtg
ctccagagccagtttggcctgtcactgctcctcgttgtcctgagccgcggggaagacctg
cagagttcagatcctgctacagaaccaacggaaaacaaccagtggaaggaggtgatgttc
atggcaacccgagaacttctgcggattccccaggtggccctggccaagccagtctctatc
cccacaaacctagtatccctcttttctcgctatgttgaccggcagaaactgaacttgctg
gagacaaaactgcagctagttcaggggatacgataa
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