Rousettus aegyptiacus (Egyptian rousette): 107498472
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Entry
107498472 CDS
T06036
Symbol
DDX39B
Name
(RefSeq) spliceosome RNA helicase DDX39B
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03013
Nucleocytoplasmic transport
ray03015
mRNA surveillance pathway
ray03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107498472 (DDX39B)
09122 Translation
03013 Nucleocytoplasmic transport
107498472 (DDX39B)
03015 mRNA surveillance pathway
107498472 (DDX39B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ray03019
]
107498472 (DDX39B)
03041 Spliceosome [BR:
ray03041
]
107498472 (DDX39B)
Enzymes [BR:
ray01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107498472 (DDX39B)
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107498472 (DDX39B)
Spliceosome [BR:
ray03041
]
Complex C
Other components
EJC/TREX
107498472 (DDX39B)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107498472 (DDX39B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107498472
NCBI-ProteinID:
XP_015977127
UniProt:
A0A7J8K709
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MRSPCSVLLWETSVPLFLKPTLCFHLFCVNPTRDPSPSPPAGPVMAENDVDNELLDYEDD
EVETAAGGDGTEATAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECI
PQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERF
SKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILD
ECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETK
LTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIA
IHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVA
RAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQTR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctccttgttcagttcttttgtgggaaactagcgtgcctctattccttaagccc
acactttgttttcacttattctgcgtgaacccaaccagagacccctccccttctccccct
gccggcccagttatggcagagaacgatgtggacaatgagctcttggactacgaagatgat
gaagtggagacagcagctgggggagatgggacagaggccactgccaagaaggacgttaag
ggctcctacgtctctatccatagctctggctttcgtgacttcctgctcaagccagagttg
ctccgggctatcgttgactgtggctttgagcatccatctgaagttcagcatgagtgcatc
cctcaggccattctgggaatggatgttctatgccaggccaagtcaggcatgggaaagaca
gcagtgtttgtgctggccacactgcaacagctggagccggttactgggcaggtgtctgtt
ctggtgatgtgtcacactcgagagttggcttttcagattagcaaggagtatgagcgcttc
tctaaatacatgcccaatgtcaaggtcgcagtgttttttggtggtctgtctatcaagaaa
gatgaagaggtgctgaagaagaactgcccgcatatcgtcgtgggaacccctggccgcatc
ctagccctagctcggaataagagtctcaacctcaaacacattaaacactttatcttggat
gaatgcgataagatgcttgaacagctcgacatgcgtcgggatgtccaggaaatttttcgc
atgaccccccatgagaagcaggtcatgatgttcagtgctaccttgagcaaagagatccgt
ccagtctgccgcaagttcatgcaagacccaatggagatcttcgtggatgatgagacgaag
ctaaccctgcatgggttgcagcagtactacgtgaaactgaaggacaacgagaagaaccgg
aagctttttgaccttctggatgtccttgagttcaaccaggtggtgatctttgtgaagtct
gtacagcgctgcattgccctggcccagctccttgtggagcagaacttcccagccattgcc
atccaccgtgggatgccccaggaggagaggctttctcggtatcagcagtttaaagatttt
caacgacgaattcttgtggctacaaacctgtttggccgaggcatggacattgagcgggtg
aacattgcatttaactatgacatgcctgaggactctgacacctacctgcatcgggtggct
agagcaggccggtttggcaccaagggtttggccatcacatttgtgtcagatgagaatgac
gccaagatcctgaatgatgtgcaagatcgctttgaggtcaatattagtgagctgcccgat
gagatagacatttcctcctacattgaacagacacggtag
DBGET
integrated database retrieval system
