Rousettus aegyptiacus (Egyptian rousette): 107498557
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Entry
107498557 CDS
T06036
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03082
ATP-dependent chromatin remodeling
ray05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107498557 (PBRM1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
107498557 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ray03021
]
107498557 (PBRM1)
03036 Chromosome and associated proteins [BR:
ray03036
]
107498557 (PBRM1)
Transcription machinery [BR:
ray03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107498557 (PBRM1)
Chromosome and associated proteins [BR:
ray03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
107498557 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107498557
NCBI-ProteinID:
XP_015977290
LinkDB
All DBs
Position
Unknown
AA seq
1725 aa
AA seq
DB search
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQ
KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEVDD
EDDDEDGQDNQGTVTEGSSPSYLKEILEQLLEAIVVATNPSGHLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI
FYMKKAEIEHHEMAKSSLRMRTSSNLAGPRMTVPSHSKSSLGEERNATSKYYRNKRAVQG
GRLSAITMALQYGSESEEDATLAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNN
QGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA
KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTLDS
EMLGLRRLSSKKNIRKQRMKILFNVVLEAREPGTGRRLCDLFMVKPSKKDYPDYYKIILE
PMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKE
LGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIF
LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL
IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL
AEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYED
AVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEE
KREAEKSEDSAGAAGLSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLW
EDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYF
KLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANA
DKGDNEKNTDNSEDSRTEESFNLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCV
FIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETC
PMTCILGKCSVLSFKDFLSCRPTEIPENDVLLCESRYNESDKQMKKFKGLKRFSLSAKVV
DDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQ
LQTPLTSELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDY
SFGELSRLVGTEWRNLETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALM
GVVPPPTPMGMLNQQLTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLP
PGVPGLPGIPPPGVMNQGVTPMVGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPP
VIQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESSSISKWDQTLAARRRDVHLSKEQ
ESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENL
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggcgctggttgtgctctggtaaagctgaagaagttggat
tcaatgggttccaagagaagaagagctacctccccttccagtagtgtcagtggggacttt
gacgacgggcaccattccgtgtccacaccaggcccaagcaggaaaaggaggagactttcc
aatcttccaactgtagatcctattgctgtgtgccatgaactctacaacaccatccgagac
tataaggatgaacagggcaggctcctctgtgagctcttcattagggcaccgaagcgaaga
aatcaaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacag
aaactaaaaatggaggaatatgatgatgtgaatctgctgactgctgacttccagttgctt
tttaacaatgcaaaagcctattataagccagattctcctgaatataaagctgcttgcaaa
ctctgggatctgtaccttcgaacaagaaatgagtttgttcagaaaggagaagtggatgat
gaagatgatgatgaagatgggcaagacaatcaaggcacagtgactgaaggatcttctcca
agttacttgaaagagatcctggagcagcttcttgaagccatagttgtagccacaaatcca
tcaggacatctcattagcgaactttttcagaaactgccttctaaagtgcaatatccagac
tattatgcaataattaaggaacctatagatctcaagaccattgcccagaggatacagaat
ggaagctacaagagtattcatgcaatggccaaagatatagatctcctagcaaaaaatgcc
aaaacttataatgagcctggttctcaagtattcaaggatgcaaattctattaaaaaaata
ttttatatgaaaaaggcagaaattgaacatcatgaaatggctaaatcaagccttcgaatg
agaacttcatcaaatttggccggacccaggatgacagttccttcccacagtaaaagcagc
cttggtgaagagagaaatgctactagcaagtattaccgtaataaaagagcagtccaaggg
ggtcgtttatcagcaataaccatggcacttcagtatggctcagaaagtgaagaggatgct
actttagctgctgcacgttatgaagaaggagagtcagaagcagagagcattacttcattt
atggatgtttcaaatcctttttatcagctttatgacacagttaggagctgtcggaataac
caggggcagctaatagctgaaccttttttccatttgccttcaaagaagaaataccctgat
tattatcaacaaattaaaatgcccatatcactacaacagattaggacaaagctaaagaac
caagaatatgaaactttggatcatttggagtgtgatctgaatttaatgtttgaaaatgcc
aaacgctataatgttcccaactcagctatctacaagcgagttctaaaattgcagcaagtc
atgcaggcaaagaagaaggagcttgccaggagagacgacattgaggatggagacagcatg
atctcttcagccacctctgatactggtagcgccaaaagaaaaaggaacactcttgacagt
gagatgttgggtctcaggaggctatccagtaaaaagaacataagaaagcagcgaatgaaa
atcttattcaatgttgttcttgaagctcgtgagccaggtacaggcagaagactttgtgat
ctgtttatggttaaaccatctaaaaaggactatcctgattattacaaaatcatcttggag
ccaatggacttgaaaataattgagcataacatccgcaatgacaaatatgcgggagaagaa
ggtatgatagaagacatgaagctgatgttccggaatgccaggcactataacgaggagggt
tcccaggtttacaatgatgcccacatcctggagaagttactcaaggataaaaggaaagag
ctcggccctctgcctgatgatgacgacatggcttctcccaaactcaaactgagtaggaag
agtggcatttctcctaaaaaatcaaaatacatgactccaatgcagcagaaactaaatgaa
gtctatgaagcggtaaagaactatactgataagagaggtcgccgcctcagtgccatattt
ctgaggcttccctccagatctgagcttcctgactattatctgaccattaaaaagcccatg
gacatggaaaaaattcgaagtcacatgatggccaacaaataccaagatatagactccatg
gttgaagacttcgtcatgatgtttaacaatgcatgtacatacaatgaacctgagtctttg
atctataaagatgcccttgtcctgcacaaagtccttctcgaaactcggagagacctagag
ggagatgaagactctcatgtcccaaatgtgaccttgctaattcaagagcttatccacaat
ctttttgtgtcagtcatgagtcatcaggatgatgagggaagatgttatagtgattcctta
gcagaaattcctgctgtggatcccaactttccaaacaaacctcctcttacttttgacata
attaggaagaatgttgaaaataatcgctaccggcggctcgatttatttcaagaacatatg
tttgaagtattggaaagggcaagaaggatgaatcggacagattccgaaatatacgaagat
gcggtagaacttcagcagttttttattaaaattcgtgatgaactttgcaaaaatggggag
attctactttcaccagcactcagctatactacaaagcatttgcataatgatgtggagaaa
gagaagaaggaaaaattaccaaaagaaatagaggaagataaactaaaacgagaagaagaa
aaaagagaggctgaaaagagtgaagattccgcaggtgctgcaggtctctcaggcttacat
cgcacatacagccaagactgcagctttaagaacagcatgtaccatgttggagattatgtc
tatgtggagcctgcagaagccaacctacaaccacatatagtctgtattgaaagactgtgg
gaagattctgctggcgaaaaatggttatatggctgttggttttatcggccaaatgaaaca
ttccatctggctacacgaaaatttctagaaaaagaagtttttaagagtgactattacaat
aaagttcctgttagtaaaattctgggaaaatgtgtggtcatgtttgtcaaggaatacttt
aaattatgcccagaaaactttcgtgatgaagatgtttttgtctgtgaatcacggtattct
gccaaaaccaaatcttttaagaaaattaaactgtggaccatgcccatcagctcagttaga
tttgttcctcgagatgtacccttgcctgtggtccgagtggcctctgtatttgcaaatgca
gacaaaggggataatgagaagaacacagacaactcagaggacagtcgaactgaagaaagt
tttaacttggaaaaggaaaaagaagatgtccctgtggaaatgtcaaatggtgaaccaggt
tgccactactttgagcagctccgttacaatgacatgtggctgaaggttggcgactgtgtc
ttcatcaagtcccatggcttggtgcgccctcgcgtgggcagaattgaaaaagtatgggtc
cgagatggagctgcatatttttatggccctatcttcattcacccagaagagacggaacat
gagcccacaaaaatgttctacaaaaaagaagtatttctgagtaatctggaagaaacctgt
cccatgacatgtattctgggaaagtgttctgtgttgtcattcaaggacttcctctcctgc
aggccaactgaaattccagaaaatgatgttctgctttgtgagagccgctacaatgagagt
gacaagcagatgaagaagttcaagggactaaagaggttttcactctctgctaaagtggta
gatgatgaaatttattacttcagaaaaccaattgttcctcagaaggagccctcacctttg
ttggaaaagaagatccagttactagaagctaaatttgctgagttagaaggtggagatgat
gatatcgaagagatgggagaagaggatagtgaagtcattgagcctccctctctacctcaa
cttcagactcccctgaccagtgagctggatctcatgccctacacacccccacagtctacc
ccaaagtctgccaaaggcagtgccaagaaagaaggctccaaacggaaaatcaacatgagt
ggctacatcctgttcagcagtgagatgagagctgtaattaaggcccagcatccagattac
tcttttggggaactcagccgactagtggggacagaatggagaaacctcgagacagccaag
aaagcagaatatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagca
gcacagcaacagcagccgagtgcttctccccgagcaggcacccctgtgggggctctcatg
ggggtggtgccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgca
ggcatgatgggtggctatccgccaggccttccacctttgcagggcccagttgatggcctt
gttagcatgggcagcatgcagccacttcaccctggggggcctccaccccaccatcttccg
ccaggtgtgcccggtctcccgggcatcccaccaccgggggtgatgaaccaaggagtgacc
cctatggtagggactccagcaccaggcggaagtccatatggacagcaggtaggagttttg
gggcctccagggcagcaggcaccacctccatatcctggcccacatccagctggcccccct
gtcatacaacagccaacaacgcctatgtttgtggctcccccaccaaagacccaacggctt
ctccactcagaggcctacctgaaatacatcgaaggactcagtgctgagtctagcagcatt
agcaagtgggaccagactctggcagctcgaagacgtgatgtccatttgtcaaaagaacag
gaaagccgcctaccttctcactggctgaagagtaaaggggctcacaccaccatggcagat
gccctttggcgccttcgggatttgatgctccgagacaccctcaacattcgccaagcatac
aatctagaaaacctataa
DBGET
integrated database retrieval system
