Rousettus aegyptiacus (Egyptian rousette): 107499786
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Entry
107499786 CDS
T06036
Symbol
RFC1
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03030
DNA replication
ray03410
Base excision repair
ray03420
Nucleotide excision repair
ray03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107499786 (RFC1)
03410 Base excision repair
107499786 (RFC1)
03420 Nucleotide excision repair
107499786 (RFC1)
03430 Mismatch repair
107499786 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ray03032
]
107499786 (RFC1)
03400 DNA repair and recombination proteins [BR:
ray03400
]
107499786 (RFC1)
DNA replication proteins [BR:
ray03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107499786 (RFC1)
DNA repair and recombination proteins [BR:
ray03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107499786 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
Rad17
AAA_14
BRCT_2
AAA_5
RuvB_N
AAA_30
AAA_16
AAA_33
AAA_7
AAA_17
AAA_18
nSTAND3
UxaC
RNA_helicase
NPHP3_N
AAA_19
NTPase_1
TIP49
Motif
Other DBs
NCBI-GeneID:
107499786
NCBI-ProteinID:
XP_015979767
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MAAARRHRRRTGAHVALPASGWGAVRSLTSSPGAAASTSFYCEGEVVGANGSRAPVTDSQ
PARPRLKTWAAMDIRKFFGVIPSDKKPASETVKKNEKTKSAEETFKTKKGIKEIKVNSSC
KEDDSKQKQPNKKKRVIYDSDSESEETVQVKNAKKEPEKLSLSPKPSKIIRNDPVTYISE
TDDEDDFVCKKAASKSKENGGSTNSYLGATNMKKNEENIKTKNKPLSPIKLTPTSVLDYF
GTGSVQRSDKKMVASKRKEPSQNADDSRLNDETIAKQLQLDEDAELERQLHEDEEFARTL
AMLDEEPKNKKAHKDQEERETFSSVQANLHKTEKHKSPYKVKTEQFMDKRKNYSPKKQTK
CESSKESQQHSKSSPYKIRKTSPKASSKLTLLKNKEESSSKETEPMSSKRKENAIELKET
KTPKKTKSSPAKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLI
FVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIID
EDGLLDLIRTMPGKKSKYEIAVEAEMNKGKSKLQRTPQKNEQGKRKISPTKKESESKKSR
LTPKRGSSLNSVMKETSVFQRGLDFKEQEAEETSGNSWARNWADDSSENKVENLLWVDKY
KPTSLKTIIGQQGDQSCANKLLRWLQNWHKRPSEDKKHAKFGKFAGKDDGSSFKAALLSG
PPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIRGFYSSGAAHSV
STKHALIMDEVDGMAGTEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLR
FQRPRVEQIKGAMMSIAFKEGLRIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYD
QAKADSHRAKKDIKLGPFDVARKVFATGEETAHMSLVDKSDLFFHDYSIAPLFVQENYLH
VKPVAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSRQNWSLLPTQAIYASVLPGELMRG
YMTQFPTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTINMDYLSHIRDVLVQPLI
SQGVEGVQDVVALMDAYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEIH
LTPYSLQAVKTSRQSTGPALDSEYNEELNEDDSQSDEKDQDSTETDAMIKKKTKSSKSSK
SEKDKESRKGKGKSSKK
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcccgccggcatcggcgccgcacgggtgcccacgtcgcacttcccgcctcg
ggctggggagctgtgcgctccttgacgtcatcaccgggcgccgctgcctccacctccttc
tactgcgagggagaagttgttggcgcgaatggatctcgagccccggtaacggattcccag
cctgcccgcccgcgccttaagacttgggctgcgatggatattcggaaattctttggggtt
atcccaagtgacaagaaacctgcgagtgaaacagtaaagaagaatgagaaaacaaagtct
gctgaagaaacattcaaaacaaagaaaggaataaaggaaatcaaggtaaatagttcttgt
aaagaagatgactctaaacagaagcaaccaaacaagaaaaagagggtcatctatgattca
gattcagaatcagaggagacagtgcaggtaaaaaatgccaaaaaggaaccagaaaaattg
tcattgtctcctaaacctagtaaaattatacggaatgatcctgttacatacatttcagaa
acagatgatgaagatgacttcgtgtgtaagaaggcagcctctaaatcaaaagagaatgga
ggatctacaaatagttaccttggagcaacaaacatgaaaaagaatgaagaaaacattaag
accaagaataagcctctatcaccaataaaacttacccccacatcagtgcttgattatttt
ggaactggaagtgtccaaagatcagataagaagatggtggcaagcaaaagaaaagagcct
tcacaaaatgcagatgattccaggttaaatgatgaaactatcgccaagcaattgcaactt
gatgaagatgcagagctggagagacaattgcatgaagatgaagagtttgctagaacatta
gccatgttggatgaagaacctaagaacaaaaaggctcacaaggaccaagaagagagagaa
acgttttcatctgtccaagccaatttacataaaacagaaaaacataaatctccttataaa
gtgaaaacagaacaatttatggataaaaggaagaactacagtcctaagaagcaaactaaa
tgtgaaagctcaaaagaatctcagcagcattccaagtcatcaccttacaaaataagaaaa
acttctcctaaagctagttccaagctgacgcttttgaaaaacaaagaagagagttcttct
aaagaaacagagcctatgtcctcaaaaagaaaagaaaatgccattgaattgaaagagaca
aaaactcctaagaagaccaaaagttctccagctaaaaaagagtctgtaagtcctgaagat
tctgaaaaaagacgcactaattatcaagcttatcgaagttacttaaatcgagaaggtccc
aaagctctgggttccaaagaaattccaaagggagctgaaaattgcttggaaggccttata
tttgtaatcacaggagtgctggagtccattgaaagagatgaagccaagtctttaattgaa
cgttatggaggaaaagtaactggaaatgtcagcaagaaaacaaactaccttgtcatgggt
cgtgatagcggacagtccaagagtgataaggcagcagctttggggacaaaaattattgat
gaagatggcctattggatctgattcgaactatgccaggcaagaagtccaaatatgaaata
gcagttgaagctgagatgaataaaggaaagtccaaattgcaaagaacaccacaaaaaaat
gaacaaggaaaaaggaaaattagtccaaccaagaaggagtcagaatccaaaaagagcaga
ctgactcccaaaaggggcagctctctaaattcagtaatgaaggaaacaagtgtgtttcag
agaggcctggacttcaaggaacaggaggctgaggagacaagtggtaacagctgggctagg
aattgggctgatgacagcagtgaaaacaaagtggaaaatttgctctgggtcgataaatat
aagccaacctcgctcaagaccataattggacagcaaggtgaccagagctgtgccaacaaa
ctcctacgctggctgcaaaactggcacaagagaccatctgaagataaaaaacacgcaaag
tttggtaaatttgctggcaaagatgatggttctagttttaaagcagcattgctctcaggc
cctccaggtgttggcaaaacaaccacagcctctctggtctgtcaggaattgggatatagc
tacgtggaactgaatgcaagtgatactcggagtaagaacagtttgaaggagattgttgct
gagtcacttaataataccagcatcagaggcttttattcaagtggagcagcccattcagta
agcacgaaacacgctctcatcatggatgaggtggatggcatggcgggcacggaagacagg
ggaggcattcaggaattaattggcctgataaaacatacaaaaattcccattatttgtatg
tgcaacgatagaaatcatcccaagattcgctctttggttcattattgttttgatcttcgt
tttcaaagacctcgggttgaacagataaagggtgctatgatgtctattgcatttaaagag
ggtttaaggattcctcctccagctatgaatgaaataattttgggagccaatcaagatatc
agacaggttttacacaatctgagtatgtggtgtgcacgaagtaaggcgctaacctatgac
caggccaaggctgattctcatagagccaaaaaggatatcaaactgggcccatttgatgta
gcccggaaagtgtttgcaactggagaggagactgctcacatgtcgcttgtggacaaatca
gatctcttttttcatgattattcaatagcacccctctttgtccaggagaactacttgcat
gtgaagcctgtagctgcagggggtgacatgaaaaagcacttgatgcttttaagcagagca
gcagatagcatatgcgacggtgacctagtggaccgtcagatccggagtaggcaaaactgg
agtcttctgcccacccaggccatttatgccagtgttcttccaggagagttaatgaggggt
tacatgacccagtttcccaccttcccgagctggttgggtaagcattcatctacaggtaaa
cacgatcggattgttcaggacctggcattgcatatgagtctcagaacttactccagcaaa
aggactatcaatatggattatctgtcacatataagggatgtacttgtacagcccttgatc
tcacaaggggtagaaggagtacaggatgttgttgctcttatggacgcatattacttgatg
aaagaagactttgagaatatcatggaaattagcagctggggaggcaaacctagccccttc
tccaagctggatcccaaggtgaaagcagcctttacaagagcttacaataaggaaatccac
cttactccatattcacttcaggcagtaaagacatcaagacagagcacaggcccagcactg
gattctgaatataacgaagagttaaatgaagatgactctcaatctgatgagaaggatcaa
gatagtacggaaactgatgctatgatcaagaaaaagacaaaatcttcaaagtcttcaaaa
tcagagaaagataaggagtccagaaaaggaaaaggaaaaagttcaaagaaatga
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integrated database retrieval system
