Rousettus aegyptiacus (Egyptian rousette): 107499897
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Entry
107499897 CDS
T06036
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray04151
PI3K-Akt signaling pathway
ray04510
Focal adhesion
ray04512
ECM-receptor interaction
ray04974
Protein digestion and absorption
ray05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107499897 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107499897 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107499897 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
107499897 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
107499897 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ray00536
]
107499897 (COL2A1)
Glycosaminoglycan binding proteins [BR:
ray00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107499897 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
107499897
NCBI-ProteinID:
XP_015980006
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRFGAPQTLVLLTLLVAAVLRCHGQDVEKAGSCVQDGRRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGEAGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGAPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGTPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIAGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGGREKGPDPLQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDVGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcttcggggctccccagacgctggtgctgctgacgctactcgtcgccgctgtc
cttcggtgtcacggccaggatgtcgagaaggctggcagctgtgtgcaggacgggcggagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccctgaaacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
ccccctgggcctcagggacctgcaggtgaacaaggacccagaggtgatcgtggtgacaaa
ggtgaaaaaggtgcccctggacctcgtggcagagatggagaacctgggacccctggaaat
cctggcccccctggccctcccggcccccctgggccccccggccttggtggaaactttgct
gcccagatggctggaggatttgatgagaaggccggtggcgcccagatgggagtaatgcaa
ggaccaatgggccccatgggaccgcgaggacctccaggccctgctggtgctcccgggcct
caaggatttcaaggcaaccctggtgaaccaggggaacctggcgtctccggtcccatgggt
ccccgtggtcctcctgggccccctggaaaacctggtgatgatggtgaagctggaaagcct
ggaaaatctggcgaaagaggccctcccggccctcagggtgctcggggcttcccaggaacc
ccaggccttcctggtgtcaaaggtcacagaggttacccaggcctggatggtgctaagggc
gaagctggtgctccaggtgtgaagggtgagagtggttcccctggtgagaatggttctcca
ggcccaatgggtccccgcggtctgcctggtgagagaggacggactggccctgctggtgcc
gcaggtgcccgaggcaacgatggtcagcccggccctgcaggacctccgggtcctgtgggt
cctgccggtggtcctggcttccctggggctcctggtgccaagggtgaagctggtcccact
ggtgctcgtggtcctgaaggcgctcaaggtcctcgtggtgaacctggcactcctgggtcc
cctgggcctgctggtgcctctggtaaccctggaacagatggaattcctggagccaaagga
tctgctggcgctcctggcattgctggtgctcctggctttcctgggccccgtggtccgcct
ggcccccaaggtgcaactggtcctctgggcccgaaaggtcagacgggtgagcccggtatt
gctggcttcaaaggtgaacaaggcccgaagggagaacctggccctgcaggcccccaagga
gcccctggtcctgctggtgaagaaggcaaaagaggtgcccgcggagagcctggtggtgct
gggcccatcggtccccctggagaaagaggtgctcctggcaaccgtggtttcccaggtcaa
gatggtctggcaggtcccaagggagcccctggcgagcgagggcccagtggccttgctggc
cccaagggagccaacggtgacccaggccgtcccggagagcctggccttcctggagcccgg
ggtctcactggccgccctggtgatgctggtcctcaaggcaaagtcggtccttctggagcc
cctggtgaagacggtcgccctggacctccaggtcctcagggggctcgtgggcagcctggt
gtcatgggcttccctggccccaaaggtgccaatggcgaacctggcaaagctggtgagaaa
ggacttcctggcgctcctggtctgagaggtcttcccggcaaagatggtgaggcaggcgcc
gcaggcccccctggacccgctggacctgctggtgaacgaggcgaacagggtgctcctggg
ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaaacca
ggtgaccagggcgttcccggtgaagctggagcccccggcctcgtgggtcccagaggagaa
cgaggtttcccaggtgaacgcggctctcccggtgcccagggcctccagggtgcccgtggc
ctccccggcacccccggcactgatggtcccaaaggtgcatctggcccagctggcccccct
ggggctcagggccctccaggtctgcaggggatgcccggtgagaggggagcagctggtatc
gctgggccgaagggagacagaggtgatgttggtgagaaaggccccgagggagcccctggg
aaggacggtggacgaggtctgactggtcccattggaccccctggcccagccggtgccaat
ggtgagaagggagaagttggccctcctggtcctgcaggaacagctggtgctcgtggtgcc
ccgggtgaacgtggagagactggaccccctggacctgctggattcgctggtcctcccggt
gctgatggccagccaggggccaagggcgagcaaggagaggccggccagaagggtgatgct
ggcgccccaggtcctcagggcccctctggagctcctggacctcagggtcccactggcgtg
actggtcctaaaggagccagaggtgctcaaggtcccccgggagccaccggattccctgga
gctgctggccgtgttggacccccaggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagtgggccccctggtcga
gctggtgaccctggcctccagggtcctgcaggagcccctggcgagaaaggagagcctgga
gatgatggtccctcgggtcccgacggtcctccaggtccccagggtctggctggtcagagg
ggcatcgttggtcttcctgggcagcgtggcgagagaggattccctggcctacccggccca
tcgggtgagcccggcaagcaaggagctcctggcgcatctggagaccgaggtccccctggc
cccgtgggtcctcctggcctgactggtcctgctggtgaacctggacgagagggaacccct
ggtgctgatggcccccctggcagagatggtgcagctggagtcaagggtgatcgtggtgag
actggccccctgggcgctcctggagcccctgggccccctggctctcctggcccggctggc
ccaactggcaagcagggagaccgaggagaagctggcgcacaaggtcccatgggacccgca
ggaccggctggagcccggggaatcgcaggccctcaaggcccccgaggtgacaaaggagaa
gctggagaggctggcgagaggggactgaagggacatcgtggcttcaccggtctgcagggt
ctgcctggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccccgtgggtccttctggcaaagatggtgctaatggaatc
cctggccccattggacctcccggtccccgtggacgttcgggcgaaacaggccctgctggt
cctcctggaaatcctggaccccctggccctccaggcccgcccggccctggcatcgacatg
tcggcctttgctggcctgggtgggagagagaaaggccctgaccccctgcagtatatgcgg
gcagaccaggcagctggcaacctgagacagcatgacgccgaggtggatgccacactcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccctgct
cgcacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttagacgccatgaaggttttctgcaacatggagactggt
gagacctgcgtctaccccaacccagccaatgttcccaagaagaactggtggagcagcaag
agcaaggacaagaaacacatctggtttggagaaaccatcaacggcggcttccacttcagc
tatggagatgacaacctggctccgaacactgccaacgttcagatgaccttcctgcgcctg
ctgtccaccgagggctcccagaacatcacctaccactgcaagaacagcatcgcctacctg
gacgaagcagctggcaacctcaagaaggccctgctcatccagggctccaatgacgtggag
atccgggccgagggcaacagcaggttcacatacactgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcgcgcctg
cccatcattgacattgcacctatggacgtaggagggcccgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
