Rousettus aegyptiacus (Egyptian rousette): 107500776
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Entry
107500776 CDS
T06036
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03008
Ribosome biogenesis in eukaryotes
ray03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107500776 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
107500776 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ray03021
]
107500776 (XRN2)
03019 Messenger RNA biogenesis [BR:
ray03019
]
107500776 (XRN2)
03009 Ribosome biogenesis [BR:
ray03009
]
107500776 (XRN2)
03016 Transfer RNA biogenesis [BR:
ray03016
]
107500776 (XRN2)
Transcription machinery [BR:
ray03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107500776 (XRN2)
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
107500776 (XRN2)
Ribosome biogenesis [BR:
ray03009
]
Eukaryotic type
Pre-60S particles
RNases
107500776 (XRN2)
Transfer RNA biogenesis [BR:
ray03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
107500776 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
107500776
NCBI-ProteinID:
XP_015981854
UniProt:
A0A7J8DLY7
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPGGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSVSPNTSF
TSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETRRNSLGGDVLFVGKHHLLHDFILQLYQTGSTEPMDVPPELCHGIQG
KFSLDEEAILPDQIVCSPVPMLRDLTQNAAISINFKDPQFAEDYIFKAVMLPGARKPAPV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGTGVYSNAAPPPMT
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVVAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggcgttctttcgctggctcagccgcaagtacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaagattcctgttgatgccagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccaaaaaatgaggatgaaatgatggttgca
atttttgagtacattgacagacttttcaatattgtaaggccaagacgacttctctacatg
gcaatagatggagtggcaccacgggctaaaatgaaccaacagcgttcgaggaggttcaga
gcatcaaaagaaggaatggaagcagcagtagagaagcagcgagtcagggaagaaatactg
gcaaaaggtggctttcttcctccagaagaaataaaagaaagattcgatagcaactgtatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccccgggtggaaaaatttgacagttattttatctgatgctagtgct
cctggtgaaggagaacataaaatcatggattacattagaagacaaagagctcagcctaac
catgacccaaacactcatcattgcttatgtggagcagatgctgatctcatcatgctcggt
cttgctacacacgaacccaattttaccattattagagaagaattcaaaccaaacaaaccc
aaaccgtgtggtctttgtaatcagtttggacatgaggtcaaggactgtgagggtttgcca
agagaaaagaagggaaagcacgatgaacttgcagatagtcttccttgtgcagagggagag
tttatcttccttcgtcttaatgttcttcgtgagtatttggaaagagagctcaccatggcc
agcctaccattcacatttgatgttgagaggagcattgatgactgggtcttcatgtgcttt
tttgtgggaaatgacttccttcctcacctgccatcattagagattagggaaggtgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttcactcctggtggaatattaacccct
catgccttgggttcaagaaattcaccaggttctcaagtagcaagtaatccaagacaagca
gcctatgaaatgaggatgcagaataattctagtccttcagtatctcctaatacgagtttc
acttctgatggctccccgtctccattaggaggaattaagcgaaaagcagaagacagtgac
agtgaacctgagccagaggataacgtcaggctgtgggaagctggttggaagcaacgttac
tataaaaacaaatttgatgttgatgcagctgacgagaaatttcgtcgtaaagttgtacaa
tcttacgttgaagggctctgctgggttcttcgatattattaccagggctgtgcttcctgg
aagtggtattatccattccattatgcaccatttgcttcagactttgaaggtattgcagac
atgccttctgattttgagaagggcactaaaccgtttaaaccactggaacaactgatggga
gtttttccagctgcaagtggtaactttctacctccatcatggcggaagctcatgagtgat
cctgattctagtataattgacttctatcctgaagattttgccattgatttgaatgggaaa
aaatatgcatggcaaggtgttgctctgttgccatttgtggatgagcgaagactacgagct
gccctagaagaggtgtacccagacctcaccccagaagaaactagaagaaacagtcttgga
ggcgatgtcttatttgtggggaaacatcacctactccatgacttcattttacagctatat
cagacaggttccacagagccaatggatgtaccacctgaactatgtcatgggattcaagga
aagttttccttggatgaagaagccattcttccagatcaaatagtatgttctcctgttccc
atgttacgagatctgacacagaacgctgcgatcagtattaattttaaagacccacaattt
gctgaagattacatttttaaagctgtaatgcttccaggagcaagaaaaccagcaccggta
ctgaaacctagtgactgggaaaaatccagcaatggacggcagtggaagccccagcttggc
tttaaccgggaccggcggcctgtccacctggatcaggcagcattcaggactttgggccat
gttatgccgagaggctcaggaactggagtttacagtaatgctgcaccaccacctatgact
tatcagggaaacttatacaggccgctgttgagaggacaagcccagattccaaaactcatg
tcaaatatgaggccccaggattcctggcgaggtcctcctcctcttttccagcagcaaaga
tttgacagaggcgttgtcgccgaacctctgctgccatggaaccgtatgctccaaacccaa
aatgcagcgttccagccaaaccagtaccagatgctagctggacctggcggatatccaccc
agacgtgatgatcgtggaggaagacagggatatcccagagaaggaagaaaataccctttg
ccaccaccctcaggaagatacagttggaattag
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