Rousettus aegyptiacus (Egyptian rousette): 107501927
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Entry
107501927 CDS
T06036
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107501927 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ray03041
]
107501927 (DDX42)
Enzymes [BR:
ray01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107501927 (DDX42)
Spliceosome [BR:
ray03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
107501927 (DDX42)
Complex B
107501927 (DDX42)
Complex C
U2 SnRNP specific factors
107501927 (DDX42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
107501927
NCBI-ProteinID:
XP_015983997
UniProt:
A0A7J8G6N1
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSGFGKSAPPQLPSFYK
IGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPADSDSDDDPLEAFMA
EVEDQAARDMKRLEEKDKEKKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNL
EYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITSLTPQQLIDLRHKLNL
RVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGS
GKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVY
GGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQV
RSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSG
PSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVI
SDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTL
LTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYR
ERPGLGSENTDRGNNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
AGSSAAGASGWTSAGSLNSVPTNSSQQGHNSPDSPIASATKGIPGFGNTGNLSSAPVTYP
TAGAQGVNNTASGNNSREGIGGGNGKRERYTENRGGSRHSHGESGGGGGSRHGDSPRHGD
GGRHGEGYRYPESSSRHADGHRHGENRHGGGGGRHGESRGANDGRNGESRKEGCNRESRM
DPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataaaggtggccctggcactaagaggggatttggctttggaggtttcgcc
attagtgctggaaagaaggaggaaccaaaactcccacaacagtcccacagtgcctttggg
gcaaccagctcttctggatttggaaagtcggctccaccacagctcccttctttctacaaa
attggatctaaacgggccaattttgatgaagaaaatgcatattttgaagatgaggaagaa
gactctagcaatgtcgatttaccttatattcctgctgaaaattcacctacccgccagcaa
ttccattccaagccagcagattctgatagcgatgatgatcccttggaggcattcatggct
gaagtggaggatcaagcggctagagacatgaagaggcttgaagaaaaggacaaggaaaag
aaaaacgtaaagggtattcgagatgacattgaagaggaagatgaccaagaagcttacttt
cggtacatggcagagaacccaaccgctggtgtggttcaagaggaggaagaagataatttg
gaatacgatagtgatggaaatccaattgcaccttccaaaaaaatcattgatcctcttccc
cccattgatcattcagagattgactatccaccatttgaaaaaaatttttacaatgagcat
gaagagataaccagcctcaccccacagcagctaatagatctccggcataagctcaatctt
cgggtctctggtgctgcccctcctagaccaggaagtagttttgctcattttgggtttgac
gaacagcttatgcaccagattcgaaaatctgagtacacacaacccactccaatacagtgc
cagggtgtgcctgtggcattaagtggtagagacatgattggtattgccaagacaggcagt
ggaaaaactgcagcctttatctggcccatgttgattcatataatggaccagaaggaattg
gaaccaggtgatggaccaattgcagtgattgtgtgtcctactagggagctttgccaacag
atccatgcagaatgtaagcggtttgggaaagcatataatcttcggtcagtggctgtgtat
ggcggagggagcatgtgggagcaggccaaggcccttcaggaaggggcagagattgttgtg
tgtaccccaggtcgactgattgatcatgtgaagaagaaagctaccaatcttcaaagagtt
tcttatcttgtgtttgatgaagcagatagaatgtttgacatgggatttgagtaccaggtg
cgatccatagccagtcatgtccgtcctgacagacagactcttctattcagtgcaactttt
cggaaaaagattgaaaaactagccagagacatcctgatcgacccaattagagtggtgcag
ggagatattggagaggcaaatgaagatgtgacacagattgtggagatcctccattccggg
cctagtaaatggaattggcttacccggcgtctggtagagtttacctcttcagggagtgtc
ctcctgtttgttactaaaaaggccaatgctgaggagctggccaacaaccttaagcaggaa
ggtcataatctcgggctgcttcatggagacatggatcagagtgaaagaaacaaggtcatt
tcagactttaagaaaaaggatatcccagtcctggtggccacagatgtcgcagctcgtggt
ctggacattccttcaatcaagactgtcattaactatgatgtggcacgagacattgatacg
catactcataggattggccgcacaggacgagcgggtgagaagggcgttgcctataccctg
ctgactcccaaggacagcaattttgctggtgaccttgtccggaatttggaaggagccaat
cagcatgtttccaaggaactcctagatctggcaatgcagaatgcctggtttcggaaatcg
cgcttcaaaggagggaaaggcaaaaagctgaacattggcggaggaggcctaggctatagg
gagcggcctggcctaggctctgagaacacggaccgaggaaataacaacaatgtaatgagc
aactatgaggcctacaagccctccacgggagccatgggagatcggctgacggcaatgaaa
gcggcctttcagtcacagtacaagagtcactttgttgccgccagtttaagcaaccagaag
gctggaagttctgctgctggagcaagtggatggacaagtgcaggaagcttgaattctgtt
ccaactaattcatcccagcagggccataacagtcctgacagccccattgccagcgccacc
aagggcatcccaggctttggcaacactgggaacctcagcagcgccccagtgacctaccct
actgctggagctcagggggtcaacaacactgcttcaggaaataacagccgagaagggatt
gggggtggcaatgggaagagagagagatacactgagaaccggggaggcagccgtcatagt
catggagagagtggcggtggcggtggcagtcggcatggtgacagcccacgtcacggagat
ggtggtcgccatggagagggataccgctacccagaaagcagcagccgtcatgctgatggc
catcgtcatggggagaacagacatggaggaggtggaggccgacatggggagagccgaggt
gcaaatgacggtcggaatggcgaaagcaggaaagaaggttgcaaccgtgagagcaggatg
gaccccaaggtggacagcagcaagatggacaaggtggacagcaagacagataagacagct
gatggttttgctgtccctgagccacccaagcgcaagaaaagtcgatgggacagttag
DBGET
integrated database retrieval system
