Rousettus aegyptiacus (Egyptian rousette): 107502512
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Entry
107502512 CDS
T06036
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107502512 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ray03019
]
107502512 (PARN)
Enzymes [BR:
ray01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107502512 (PARN)
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107502512 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
YqeH-like_C
NCBP3
RRM_1
T6PP_C
Glyco_transf_9
Motif
Other DBs
NCBI-GeneID:
107502512
NCBI-ProteinID:
XP_015985276
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
VSKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLNEFKEMTTCVFPRLLDTKLMASTQPFKDLINNTSLAELEKRLKETPFTPPKV
ESAEDFPSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYADYVGKKHEEKQIKRKWPEESWKEVERKRSN
TQCASYAPQNHCYRSNSRTATSTAGKRKLSPSPAEAGLGARVSGEFSDPELEQTDSCAES
PTEGRKKAKKFKRMKKDLPPAGSISDSSAKLFEVPDTW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcacaaagtgtaccaggccatagag
gaggcggacttctttgccatcgatggggagttttcaggaattagtgacggaccttcagtc
actgcattaacaaatggttttgacactccagaagaaaggtatcagaagcttaagaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgactacacagat
tcaaagtatataacaaagtcattcaatttctatgttttcccgaaacccttcaatcgatcc
tcaccagatgtcaaattcgtttgtcagagctcaagcattgactttctagcaagccaagga
tttgattttaataaagtgtttcgcaatgggattccatatttaaatcaggaagaagaaaga
cagttaagagagcagtatgatgaaaaacgtttacagtccaacggtgcaggagctctgtct
tatgtatctcctaacacatcaaaatgtcctgtgacgattcctgaggatcagaagaagttt
attgaccaagtggtcgagaaaatagaagatttattacaaagcgaagaaaacaagaacttg
gacttagaaccgtgtaccgggtttcaaagaaaactaatttatcagactttgagctggaag
tatcccaaaggcattcatgttgagactttagaaactgaaaagaaagaacggtacatagtt
gtcagcaaagtggacgaagaagaacgtaaaagaagagagcagcagaaacacgcgaaagaa
caggaagaactgaacgatgccgtgggattctctagagtcattcacgccattgctaattca
gggaaacttgttattggacacaacatgctcttggatgtcatgcacacggtccaccagttc
tactgccccctgcctgcggacttaaatgaatttaaggagatgacaacgtgtgttttccct
agactcttggatactaaattgatggccagcacacaaccttttaaggatctcattaacaac
acatcccttgcagaattggaaaagcggttaaaagagacacctttcacccctcctaaagtt
gaaagcgcagaagattttccaagttatgacacggcttccgaacagctccacgaggcaggc
tatgatgcttacatcacaggactgtgttttatctccatggcaaactacctaggttctttt
cttagtcctccaaaaattcatgtgtctgccagatcaaaactcatcgaacctttttttaac
aagttatttcttatgagagtcatggatatcccctatctaaacttggaaggaccagacttg
caacctaagcgcgatcatgtcctccatgtgacattccccaaagaatggaaaaccagcgac
ctttaccaacttttcagtgccttcggtaacattcagatatcctggatcgatgacacatca
gcgtttgtttctctcagccagcctgaacaagtacaaatcgctgtcaataccagcaaatat
gcagaaagctatcggatccagacctatgccgactatgtggggaaaaagcacgaggagaag
cagatcaagagaaagtggcccgaagagagttggaaggaggttgagagaaagcgatcgaac
actcagtgcgcgtcctacgcgccgcagaatcactgttaccgcagcaacagtcgcacggcc
accagcacagcagggaagagaaagctgagccccagtccagcggaagccggcttgggggcc
agagtatccggcgagttttccgaccctgagcttgagcagactgattcctgtgcagaatca
cccacagagggaaggaagaaggccaagaaatttaaaagaatgaagaaggaccttcctccg
gcaggaagcatctcggacagctccgccaagctcttcgaagttcctgacacgtggtaa
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