Rousettus aegyptiacus (Egyptian rousette): 107504565
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Entry
107504565 CDS
T06036
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107504565 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ray03021
]
107504565 (SETX)
Enzymes [BR:
ray01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107504565 (SETX)
5.6.2.5 RNA 5'-3' helicase
107504565 (SETX)
Transcription machinery [BR:
ray03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107504565 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
UvrD-helicase
AAA_30
AAA_22
nSTAND3
ResIII
SLFN-g3_helicase
AAA_16
Helicase_RecD
UvrD_C_2
TniB
Motif
Other DBs
NCBI-GeneID:
107504565
NCBI-ProteinID:
XP_015989366
LinkDB
All DBs
Position
Unknown
AA seq
2676 aa
AA seq
DB search
MSTCCWCTPGGISTVDFLKLYASGTLSSEFQTADEDLCYCLECVAEYHKARDELPFLHEV
LWELETRRLIIHFEKSMRAEIEDDDELYIVDNNGEAQLFDFTGQDFENKLRVPLLEILKY
PYLLLHARVNELCVEALCRMEQANCSFQVFEKHPGVYLFLVHPNEMVRRWAILTAKGLGK
VDRDDYYDLQEVLTCLFKVIELGLLESPDIYTSSVLEKGKLVLLPSHMYDTTNYKNYWLG
ICMLLTILEEQAMDSLLLGSDKENDFMQLILHTMERQSDDDSGDPFWPALHCFMVILDRL
GSKVWGQLIDPIQAFQTIINNESYNREIQSIRNSSVRTKLEPESCMDDMVTCSQIVYNYN
PEKTKKDSGWRSAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMD
LKDLGVAYIVEVIHHLHSEVKDVLNQTVAVCDKVTEFFFLILVSVIELHRNKKCLHLLWV
SSQQWVEAVVKCAKLPTTAFARSSEKSSGSSSKGTPMVSSLSLHSMPSNSVQLACVQLIR
SLLKEGYQLGQQTLCKRFRDKLNLFLRGNLSLGWQLTSQETQELQTCLKQIIRNIKFKVP
QCNAIVDLTPPCKILPASCNKEESEQIEKKCKNTHCVESSSPTFSKEPMQESILSKASST
VEEDNEQNYIKDLKLEDHLSAESCLKQSSKNLFTGRAQEQVKMRTGKQKSVKDNSLYTPK
NCTARNGPERGRGRGIIVSAHSSTDSSTDSQEKVSTSNGDFSLKDDVFGKTSKAKSKAQK
DEICAKLSCVIKKPHKKITSVSSTVKFEGNLAASNVENFCSRKDTEGQKGDSFMHILSSG
PDGILDNKSGEQKSHNSLLLKKKQLKSEELGVFSSHENDCQIQECHVDSKDLVLFTETTN
TCMHKTSPFKSPGTVLESREKRVNKNTDFREQAPSVSPKSDSLTDSQIDRDLHKLSLIAQ
ASVIKFPSDSNQRSSSQLQRKVKDKRSFTANQNNVGDTSRGQIIIISDSDDDDADERILD
FEKLKRIKQDKVSIKKEGPEPRPSEVHTNTGRKLIKEEKPASPLEFEECDSQVFEFESQH
EVFSVWQDQKTDDSSVPGDGKSSCLTHIVDITNDWGYETDYPVSEEVAKLTKGIENVEPR
SSHVSVEKFCEIEVRKSKRKQFEKPAAEDSLRPSSSARNEDHSDIPNERELTENNLKIAD
MRTTTPDARVQQATAAALKKSPPKLRAYSKPIRRVPVSKAAKKTHSDAKKGQSKSSNYIS
CRTTPAIVPPKKLRQCPEPTSTVEKLGLKKAPRRAFELSQRSLEYIVQLRDHGKTVGVVD
TRKKTKLISPQTLPVKDKKLLTSQDLQLRRQVRPKSQQNRQGVFDYESADTTRAGPDAAQ
NPDVFVPESDRSDCSNKAGAEVFASSNSGRQTVTCVSSEQEPMKAKFVSQETEDPCPLNQ
RESVMVNGGILTSERAPSTSEDPLGGGDLTAHHLEAATLKKGEAESNSDMEEDNIFLTQC
NPEDMDLCSQMQPNDNDKLIEVVHGKDTVQVEEDSLSRPPVESLSSSKCKYRDCAETLKN
QGEYCSKHCEAKAADEDVFRKPGLPLSAAKPLRPSTTKIFSSSSTSRLAHLSRSLEKASA
LLPALKNKSNGAQSVLKAPPPAPLAPPQKPMVEVKSLCNILNSPTSNNSSRQGYKLPFSE
SRPFSSSPVNMLLSSQSISDAFVKEILKWKYEMFLNFDQCGPPASLCQSISRPVPVRFQD
CQDYFDVFFPLMILNTFETVAQEWISSPNKEKFYQLHLRKFPADYKKYWELAVYLDEGEL
AKQLHPKENDLVFLLPGKLNGEEHGLEHGLLQEPLEPYCGYVHKFRRTSVMRNGKAECCL
SIQTQDNVAVNLSEFVKCTVISSLVTTQRKLKAMSLLSGRNQLARAILNPNPMDFCTKDL
LTTTSERITLYLKDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYR
LLTENQRRGHPDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCG
DINLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPSYVQEMHRRKEYLDYQLDDLSRQRA
LCRGGREIQKQELDEKIARVSKERQELASKIKEVQGRPQKTQSNVILESHIICCTLSTSG
GLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMK
AQEYGYEQSMMARFYKLLEENVEHNMVGRLPVLQLTIQYRMHPDICLFPSNYIYNRSLKT
NRQTEAIRCSSDWPFQPYLVFDVGDGAERRDNDSYVNVQEIKLVMEIIKLIKDKKRDVSF
RNIGIITHYKAQKMMIQKELDKEFEGKGPAEVDTVDAFQGRQKDCVIVTCVRANATQGSI
GFLASLQRLNVTITRAKYSLFILGHLRTLMENQHWNHLIQDAQKRGAIIKTCDKNYKHDA
MKILKLKPVLQRSLTHPLTVTPEVSRPQGGDLPGTKLDSSFAKVAFALSLYHLASDSKEA
LATVAAKDSERPPAKDQPRDPRLFRRMGVSPETKGRCLQDPQPLSPQYPGATPPLGEPGC
VSPQAVGSLAEQPSAAGSGHRPRVPSEPPAAGTDAASDQRKCDQEGEHSHRRETRASSEG
DQERRGSAGRHTKRNSSWDSRTPEREDCSSKKRKLP
NT seq
8031 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgctgttggtgtacgccaggtggcatttccaccgtcgacttcctgaagctc
tatgcatccgggaccctatccagtgaatttcagaccgccgacgaagacctctgctactgc
ttggagtgtgtggccgagtaccacaaggccagggatgagcttccattcttgcatgaggtt
ttatgggaattagaaacccgacgtctcataattcattttgaaaaatccatgagggcagaa
atcgaagatgatgatgaattatacatagtggacaacaatggagaggcacagctgtttgac
tttactggccaagactttgaaaataagcttcgggttcctcttcttgaaattctgaaatat
ccttatctgctcttacacgcacgtgttaatgaattatgcgttgaagcactttgtcggatg
gaacaggccaattgctcctttcaggtttttgaaaagcatcccggggtctatttgtttttg
gttcatcccaatgaaatggttcggcgctgggccatcctgaccgcaaaaggcctggggaaa
gtggacagggacgattactatgatttacaggaggttttgacttgcctctttaaagtcatc
gagttggggctcttagaaagtccagacatttatacttcctctgtcctcgagaagggtaaa
ctggttcttctgccctcacacatgtacgatactacaaactacaaaaactattggctaggt
atctgcatgttgcttaccattcttgaagagcaggccatggattcattgttgttgggctca
gacaaagagaatgattttatgcagttgatacttcacaccatggagaggcagtcagacgac
gatagtggggatcctttctggccagcgttacactgtttcatggtgattctggatcgcctt
ggatccaaggtctgggggcagctcattgaccctattcaggcatttcaaaccatcatcaac
aacgagagctacaaccgagagatccagagcatccggaacagctctgtgaggaccaagtta
gaaccggagtcatgtatggatgatatggtgacttgcagccagattgtatacaattataat
cccgaaaagaccaaaaaggattcagggtggagatcagccatttgcccagattattgccct
aacatgtacgaagagatggaaacattagccagcgtgcttcagtcagacatcggtcaagac
atgcgtgtccataacagcacattcctgtggttcatcccattcgttcagtccctcatggac
ctgaaggatctgggcgtggcttacatcgtagaggttatccatcatctgcactcggaagtc
aaagatgtcctcaaccagacggttgccgtatgtgacaaagtcactgaatttttttttcta
attttggtgtcagtgatcgaactacataggaataaaaaatgcttgcatttgctgtgggtg
agctcccagcagtgggtggaggctgttgtgaagtgtgccaagctcccgactactgccttt
gcacggagctcggagaagtcatctggcagcagctccaaaggaacaccgatggtatcatct
ctgtcccttcattcaatgccatctaactctgtacagctcgcttgtgtgcagctgattaga
agcctccttaaagaaggttatcagcttgggcagcagactctttgtaagcgcttccgggat
aaactcaacttattcctgcgaggaaacttatccctaggctggcagttgactagtcaggaa
acccaggagttgcaaacttgtttaaagcaaattattagaaacatcaaattcaaagtaccg
caatgtaatgctatcgtggacctgactcctccgtgtaaaattcttccggcatcttgtaat
aaagaagaaagtgagcaaatagagaagaagtgtaaaaacacgcactgtgtggaaagttcc
agcccaacattttctaaagaaccaatgcaagagagtatcttgagcaaagcaagttccact
gtggaagaagataatgagcaaaattacatcaaagatttgaaactagaggaccatctctca
gctgagtcatgcttaaagcagagtagtaaaaaccttttcactggaagagctcaagaacaa
gttaaaatgcgtacagggaagcaaaagtctgtcaaagataattccttatacacaccaaag
aactgtactgcaaggaatggtccagaaaggggacgtggcagaggaataatagtatcagca
cattcatcaactgattctagcaccgattctcaggagaaggtgtccacatcaaatggggat
ttctctctgaaggatgatgtttttggcaaaacctcaaaagcaaaatctaaggcccagaaa
gatgaaatctgtgctaagttatcatgtgtaataaagaagccacacaagaaaatcacctca
gtcagtagtactgtgaaattcgaaggaaacctggccgcatctaacgttgagaatttctgt
tcaaggaaagacacagaaggtcagaaaggggatagcttcatgcacattctctcttcaggc
cctgacggtattctggataataaaagcggagaacaaaaatctcataacagtttattgctg
aaaaagaaacagttgaaaagtgaagagttaggtgttttttcttcccatgaaaatgattgt
caaatacaggaatgtcatgttgatagtaaagatttggtcctatttacagaaacgaccaat
acttgcatgcataaaacatctccctttaaaagtcccgggactgtacttgaatcaagagag
aagagagtcaacaagaatactgactttagagaacaggcccctagcgtcagccctaagtct
gactccttaacagattctcagatagacagagacctccacaaattatctttaatagctcaa
gccagtgtcattaaatttccatcagattcaaatcaaagaagctcatcccagctacaaaga
aaagtgaaagacaaaagaagtttcacagccaaccaaaataatgttggggacaccagccgt
ggtcaaataattattatttcagattccgatgatgatgacgctgatgaaagaattctggat
tttgagaaattaaaacgcattaaacaagataaagtaagcattaagaaagaaggcccagag
ccgcgtccatcagaagttcatacgaacacaggaaggaagctgatcaaggaagagaagcca
gcttcccctttagagtttgaggagtgcgactcccaggtgtttgagtttgaaagccaacat
gaagtgttttcagtctggcaagatcagaaaacagacgacagttcagttccaggggatgga
aagagctcctgcttgactcacatagtcgatatcacaaatgattggggttacgagacagat
tatcctgtttctgaagaagttgccaaactcacaaagggcatcgaaaatgtggagccacgg
agcagtcatgtttccgttgagaaattttgtgaaattgaagtaagaaaatctaagagaaaa
caatttgaaaagcccgcggccgaagattctttaagaccttcatcttctgccagaaatgag
gaccactctgacattcctaatgagagagagctgactgaaaacaatcttaaaattgcagac
atgcggacgacgacccccgatgcgcgtgtccagcaggccaccgcggccgccctgaagaag
tccccgccaaagctgcgcgcctactccaaacccatccggagggtccccgtgtccaaagcc
gcgaagaagacacattcggatgccaaaaaggggcagagtaaaagttcaaattacataagc
tgtaggacaactcctgccatcgtgccaccaaagaaattacgccagtgccccgaacccacc
tccacggttgagaagctgggtctgaaaaaggctccccgcagggcgtttgagctgtcgcag
cggtctttggagtacatagttcagctgcgtgaccatggcaaaactgttggcgtcgtcgac
acccgaaaaaagacgaaattgatttctcctcagactcttccagtcaaagataagaaactg
cttacaagtcaagatcttcagttgcgaaggcaggtaagacccaaatcacagcaaaacaga
caaggagtttttgactatgaaagcgcagataccacgagagcaggcccagatgcggcgcag
aatcctgacgtgttcgtgccagaatcagataggtcagattgtagtaacaaagcaggagct
gaggtcttcgccagcagtaatagtggaagacagacagtgacatgcgtgtcttccgaacaa
gagcccatgaaagcgaaattcgtttcccaggagaccgaggatccttgtcccttgaaccag
cgtgagtctgtcatggtaaatggaggaatactgacaagtgaacgagctccctctacttca
gaggaccctttaggcggaggtgacctgacggcacatcatttagaagcggcaactttgaaa
aagggagaggccgaatccaacagtgacatggaggaagataatatatttttgacccagtgt
aatcctgaagatatggatttatgttctcagatgcagcccaatgataatgacaaactcatt
gaagtagttcatggaaaagatacagtccaggtagaagaagattcactaagtcggcctccc
gtggagtctctgagcagctcaaaatgtaagtacagagattgtgccgaaactctgaaaaac
cagggcgagtactgctcgaaacactgtgaagccaaagcagcggacgaagacgtgtttcgg
aagcctggcctgcctctttccgcggcgaaacccctgcgaccgtccacgacgaagattttt
agctcgagtagtacctcacgacttgctcatctttcccgctccttggaaaaagcctccgct
ctcctcccagctttaaaaaataagtcaaacggggcacagtctgttttgaaagcgccacca
ccagcccctctggcgcctcctcagaagccaatggtcgaagtgaagagtttgtgcaacatt
cttaattctccaacttcaaataattccagcaggcaaggttacaaacttccattcagtgaa
agcagacctttttcttcttctccagtaaacatgctcttgtcatcacagtccatctccgac
gcctttgtgaaagagatcttaaagtggaagtatgaaatgtttttgaacttcgatcagtgc
gggcccccagcgagtctctgtcaatccatctcaagacccgtgcccgtcaggtttcaagat
tgtcaagattattttgatgtgtttttccctctgatgatattgaatacttttgaaacagta
gcgcaggaatggatcagctctccaaataaagaaaaattctatcagctgcatttacgaaaa
tttcctgcagattataaaaaatactgggaacttgcagtttatcttgatgaaggcgaacta
gctaaacagctccacccaaaggagaatgatttggtgttcttgctccctggaaaactaaat
ggagaggagcacggcctggagcacggcctcctgcaggagccgctcgagccttactgtggt
tacgttcacaagtttcgccgcacttcagtcatgcgtaatgggaaagctgagtgttgcctg
tccatccagactcaagataatgtggcagtcaacttaagtgaatttgtgaaatgcactgta
atcagttctctggtaactacgcaaaggaagttgaaagccatgtctctgttgagtggtcgg
aaccaactggctagagctattctgaatccaaaccccatggacttctgtacaaaagattta
ctgacgacgacatctgagagaattaccctctacttaaaagatttcaacgaagaccaaaag
aaagccatagaaaccgcatatgccatggtgaaacactccccatccgtcgctaagatctgt
ctgattcatggaccacctggaaccggaaaatcaaaaaccattgtcggcctgctgtaccgc
ctgctgacggagaaccagaggagggggcatcccgatgaaaactccaacgccaagatcaag
cagaaccgcgtcctggtgtgcgcgccttccaacgctgccgttgatgagctcatgaagaaa
atcatcctcgaattcaaagagaaatgtaaagacaagaagaatcctttgggaaactgtgga
gatataaacttagtacgtctgggtccagaaaagtctattaataatgaagtcctgaaattc
agcttggacagccaggttaaccacagaatgaaaaaagacttaccttcttatgtccaggag
atgcacagaagaaaggaatatctggattatcaacttgatgacctttcccgccagcgtgct
ttgtgccgaggtgggagggaaatacagaaacaagaactagacgaaaaaattgccagagtt
tcaaaagaaagacaggagcttgcttctaaaattaaagaggttcaaggccgcccacagaaa
acacagagcaatgtcatcctggagtcccacatcatctgctgcacgctgagcacgagtggc
ggtttattgctcgagtccgcttttcggggacagggaggggtccccttcagttgcgtcatt
gtcgatgaggccgggcagtcttgcgaggtggaaaccctcaccccgctcatccatcgctgc
aacaagctcatcctcgtgggggatcccaagcagctccctcccaccgtcatctccatgaag
gcccaggagtacggctacgagcagtcgatgatggcccgcttctacaaactgctggaggag
aacgtggagcacaacatggtgggcaggctgcccgtgctgcagctcaccatccagtaccgc
atgcacccggacatctgcctcttcccatccaattacatctacaacaggagcctgaagacc
aacaggcagacggaggccatccggtgctcgtcagactggccgttccagccctacctggtg
ttcgacgttggagacggcgcagagagacgggacaacgactcctatgtaaacgttcaagaa
ataaaactggtaatggaaataattaaacttatcaaagacaaaaaaagagatgtctctttc
cgaaacatcggcatcataacccattacaaggctcagaagatgatgattcagaaggagctg
gacaaagaattcgagggaaaagggccagcagaagtagataccgtggatgcattccagggc
cgtcagaaagattgtgtcattgttacatgtgtcagagcaaatgccacgcaaggctcaatc
ggatttctggcaagtttgcagagattgaacgtcaccattacccgagccaagtacagcctc
ttcatcctcggacacttgcggaccctgatggagaaccagcactggaatcacctgattcag
gacgcacagaagcgcggcgccatcatcaagacctgcgacaaaaactataagcatgacgca
atgaagatcctgaagctcaagcccgtgctgcagagaagtctgacgcaccctctgactgtc
acccctgaggtgtccagaccccagggcggtgacctgcccggcaccaagctggacagcagc
tttgccaaggtagcttttgctttgtccctgtaccacctagcctctgactccaaggaggct
ctcgcaactgttgctgcaaaggactccgaaaggccgcctgcgaaggaccagcctcgcgac
ccgcggctttttaggaggatgggcgtgagccctgaaaccaaagggagatgcctgcaggac
ccacagcccttgagcccccagtatcccggagccacacctcccctgggggagccaggctgc
gtgagtccccaggctgtgggcagcctcgcagagcagccctctgccgccggcagcggccac
agacctcgcgtgccgagtgaacctccagccgccggcaccgatgctgccagcgatcagagg
aaatgtgaccaggaaggggagcacagccaccggagagagaccagggcttccagcgagggg
gaccaggagcggcggggctctgcgggccgtcacaccaagaggaactcttcctgggacagc
cggacgccggagagggaggactgcagctccaagaagaggaagctcccgtag
DBGET
integrated database retrieval system
