Rousettus aegyptiacus (Egyptian rousette): 107505778
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Entry
107505778 CDS
T06036
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
107505778 (COL20A1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
YjeF_N
Motif
Other DBs
NCBI-GeneID:
107505778
NCBI-ProteinID:
XP_015991587
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MSARVHPCLGVCLWLWLGVTLRRGLGQVSGRLKLAVLPEDRLQMEWTESGARGLGYLVQV
KPMAGDSEQEVMLSTKTPKATVGGLSPSKGYTLQIFELTGSGNVLLARREFVIEDLKSDL
GSRSSRRPPGEPTPSVLGSPDPDSRVTSAPNPDLPTPAGPQFRCTPSTPADLIFLVDGSW
SIGHSHFRQVKGFLASIIEPFEIGPDKVQVGLTQYSGEPQTEWDLNTFHTKEEVLAAVHS
LRYKGGSTFTGLALTHVLQQNLKPAAGPRPEAAKVVILVTNGKSQDDAHAAGRVLKDLDV
DVFAVGVKNADEAELRLLASKPLDVTVHDVPDFPQLGTLAGLLSRLICQKVQGKSRQRGP
APLPPPRGLTLATVTPRTFRLTWQPSAGATQYLVRCSPASPKGEDGMEVWVGLPEVLLDG
LEPGRDYSVWVQSLRGSEASEARGIRARTRPLAPHKRLNFSDVSHDSARVSWEGPPRPVR
PCRVSYVSGEGGHSGQTEAPGNATSAVLGPLASSTTYTVRVTCLQPGGHSSTMTGRLTTR
KVPSPSQLSVTELPGDKVRLEWAAAAASGVLVYQIKWLPLGDGKAHEISVPGNLGAAVLP
GLGRHSEYEITILAYYGDGARSEPVTLRYMPLRWSPPSSLALDSESPNSLRVSWTPPSGR
VLHYRVTYVLASGSGPEKSVSIPGPRSQVTLPDLLAATKYRVLVSAVYEAGESVAASATA
RTACPALHPNGSLTGFDLMAAFGLVQKEYASIRGVAMEPSALGPAMTFTLFKDAQLTRRA
SDIHLGALPTQHTVVFLLRLLPDTPREAFALWQMTAEDFQPVLGVLLDAGRKSLTYFSHH
PRAALQEVTFDLPEVRRIFYGSFHKVHVAVGRSKVRLYVDCRKVAERPIGEAGSPPGTGF
VTLGRLAKARGPRSSSAALQLQLLQVVCSDTWAEEDRCCELPALMDGEACPALPSACTCP
PQPPGPPGPQGPPGLPGRGGAPGPQGFPGPRGLPGVKGEKGDHGRPGPQVVGSGGAQGTP
GKVGLQGPKGVRGLEGAAGLPGPPGPRGFQGMAGARGAGGERGLPGAVGPTGLPGPKGER
GEKGEPQSLAAIYQLVSQACESAIQIHLRKSSPFLHASSRPPRPILEAPVPPSMRSEAGL
PRPEDRGTGPLGVGSGAGHSVWPTVAPASVPCVRGGETGSLRGWTLQSWRPQAPWGPQSS
PPSPHSRLSLSSSLTPSPVCTEGAVQWPCHICPSGRAACHG
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccgcgtgcacccctgcctgggggtctgcctctggctgtggctgggcgtcacc
ctgagacgtggcctgggacaagtgagtggccgcctgaagctggctgtgctgcccgaggac
cggctacagatggagtggacggagtcgggggcacgtggccttggctacctggtacaggtg
aagccgatggcaggggactcggagcaggaggtgatgctgagcaccaagacccccaaggcc
acggtggggggcctgagcccctccaaagggtacaccttgcagatcttcgagctcacgggc
tcggggaacgtcctgctggctcggagggagtttgtgattgaggatttgaagagcgacttg
gggagcaggagcagccggaggccaccaggggagcccacgccctccgtcctggggagccca
gaccccgattcccgcgtcacctcggccccaaacccagacctgcccactcctgccggcccc
cagttccgctgcacgccctctacgcctgcggacttgatcttcctggtggatgggtcctgg
agcatcggccacagtcacttccggcaggtgaaaggcttcctggccagcatcatcgagccc
tttgagattgggccagataaagtccaagtaggcctgacccagtacagtggagagccccag
accgagtgggacctgaacacctttcacaccaaggaggaggtgctggccgccgtgcacagt
ctccgctacaaaggagggagcacgttcacgggcctggcgctgacccacgtgctgcagcag
aacctgaagcctgcggcgggtccccgtccggaggcagccaaggtggtgatcctagtgaca
aatggcaagtcccaggacgatgcccatgctgctggccgtgtcctcaaggacctggatgtg
gacgtctttgctgtgggcgtgaagaacgccgacgaggccgagctgaggctgctggcgtcc
aagccgctggacgtcactgtccacgatgtgccggacttcccccagcttggcacgctggcc
ggcctgctcagccgcctcatctgtcagaaggtccagggcaagagccgacagaggggccca
gcacctctgcctccaccccgggggctcaccctggccacagtgacgcccagaaccttccgc
ctcacctggcagccctcagccggggccacccagtacctggtgcgctgctcccctgcctcc
cccaagggcgaggatggcatggaggtgtgggtggggctcccagaggtgctgttggacggc
ctggagccaggcagggactacagcgtctgggtgcagagcctgcgagggtcagaggccagt
gaggcccggggcatccgcgccaggacccgccccctggccccccacaaacgcctgaacttc
tcagacgtgagccacgactcggcccgtgtgtcctgggagggccccccgaggcctgtgcgc
ccatgcagggtcagctatgtgtccggcgagggcggccactcggggcagacggaggctcct
gggaatgccacctcggccgtcctgggccccctcgcctcctccaccacgtacaccgtccgc
gtcacctgcctgcagcccgggggccactcctccaccatgaccggccgcctgaccacacgc
aaagtccccagcccgagccagctgtcagtgacagagctccctggggacaaggtgcggctg
gagtgggcggcggcggcggcctctggagtgctcgtctaccagatcaagtggctgcccctc
ggggacgggaaggcccatgagatttctgtgcccgggaacctgggtgcggccgtcctgccc
ggcctggggaggcactcggagtacgagatcaccatcctggcctactacggggacggggcc
cgcagcgagcccgtgaccctccgctatatgccccttcgctggagcccgccctccagcctg
gccctggactctgagtcgcccaacagcctgcgggtcagctggacgcctccgagtggccgc
gtcctccactaccgggtcacttacgtgctggcctcgggctcgggacccgagaaatcggtc
tccattccgggacccaggagccaggtgacactccccgacctgctggcagccaccaagtac
agggtcctggtctcagcagtctacgaggcaggggagagtgtggcggcatcggccacggcc
cggacggcctgcccggccctccaccccaacggctccctcacaggctttgacctgatggcg
gcctttggcctggtgcagaaggagtacgcctccatccgcggtgtcgccatggagccctca
gccttgggcccggccatgaccttcaccctcttcaaggacgctcagctgacacgccgagcc
agcgacatccacctgggggccctccccacccagcacacggtggtcttcctcctgcgcctg
ctccccgacacgccccgcgaggccttcgcgctgtggcagatgacggccgaggacttccag
cccgtcctgggggtcctgctggatgctggcaggaagtcgctgacctacttcagccaccac
cccagggcggccttgcaggaggtgaccttcgacctgcccgaagtgaggaggatattctat
gggagcttccataaggtgcacgtggccgtgggccgctccaaggtccggctctacgtggac
tgccggaaggtggccgagaggcccatcggggaggcgggcagcccacctggcaccggcttc
gtcacgctggggaggctggccaaggcccggggcccacggagcagctcggcagcgctgcag
ctgcagctgctgcaggtggtctgcagcgacacctgggcggaggaggacaggtgctgcgag
ctccccgcactgatggacggagaggcctgccctgccctgccttctgcctgcacctgcccc
ccacagccccccgggcccccggggccccaaggccctccgggcctgccagggaggggcggc
gccccaggaccgcagggcttcccagggcccaggggtctgccaggggtcaaaggagagaag
ggggaccacggacgcccaggcccgcaggtagtggggtcgggcggcgcccagggcactcct
gggaaggtcggcctccagggtccaaagggagtgagaggcctggagggtgccgctggctta
cccggacccccgggccccaggggcttccagggcatggcaggggccaggggcgccggcggg
gagcgaggactcccaggggctgtggggcccacggggctgccagggcccaagggggagcga
ggagagaagggcgagccacagtcccttgccgccatctaccagctcgtgagccaggcttgc
gagtccgccatccagatacacctgcggaagtccagccccttcctgcatgcgagcagcagg
ccccccaggcccatcttggaggcccctgtgccccccagcatgcgcagcgaggccgggctt
ccccgccctgaggacagaggtactggcccccttggggtggggtctggggctggtcactct
gtgtggcccacagtggcccctgcatcagtcccctgtgtgcggggtggggagacagggtcc
ctcagaggctggacactgcagagctggaggccgcaggctccctggggccctcagagcagc
cccccttctccccactcccgcctctccctctcctcttccctcacgccctctcctgtgtgc
acagaaggcgctgtccagtggccttgccacatctgtccatctggccgtgctgcctgtcat
ggctaa
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