Rousettus aegyptiacus (Egyptian rousette): 107505834
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Entry
107505834 CDS
T06036
Symbol
SPG11
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray05014
Amyotrophic lateral sclerosis
ray05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107505834 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
107505834 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ray03400
]
107505834 (SPG11)
DNA repair and recombination proteins [BR:
ray03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107505834 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
DUF1854
Motif
Other DBs
NCBI-GeneID:
107505834
NCBI-ProteinID:
XP_015991677
LinkDB
All DBs
Position
Unknown
AA seq
2444 aa
AA seq
DB search
MAADKWSGSAAAGSSCIPKTMERVLPMLLVPVPAEATGRLGSRAQLHREQEVLGSLTAAG
SLQVLSLAPGGRGGGGCCLDGPFRHFVWEDCHKSGTPTDKPRLLALSENYELLIYEFNLK
DGQCNGTISYSYTEETLQKLIEDQNISISLLSLRILSFHNNTSLLFINKCIILHIIFPER
DAEIRVLNCFTLPLPTQAVDSIIDTQLCRGILFVLSSLGWIYIFDIVDGTHVAHVDLTLH
QEDMCNEQQQEPANISSFISLKVSQDLDVVVIVSSSNSAVALNLNLYFRQHPGHILRERT
LEDIPIEGPKGIDEDDPVNSDHNMKLTKFSFQVDRSWKAQLLSLNKTIKSSKLEVSHCAP
WFQDILHLEFPESSNHSTNVPSWPFIPQDITHSQYNFPQKDYTKTSDPGRAWKVMHISEQ
EEPIELRCMSVTGFTALFTWGVERMGCTIVLWDLETQEMQCFFLGQKCIPIDNSGDQQLC
LVLTENGLSLILFGLSQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQ
LDTVDFFLKSKENLLNPSSKSSVSDQFDHFPSHLYLKNVEELTPALDLLCSAIRESDSET
QSKNFSEQLLNLTLSFLNKQIKEIFIYHEDLDEHLQKGVNILTSYINELRTFMIKFPWKL
TDVIDEYDVIENVPKVKESNIWEKLSVEDVIANAILNNRIPEAQTFFRINSHSAQRLEEL
IRIGLDLVFDNLKKNNIKEASELLKNMGFDVKDQLLKICFYTTDKNIRDFLVEILKEKNY
FSEKENGTIDFVHQVEKFYSEHLQENMQIQSFPRYWIKEQDFFKHKSVLESFLKYDQKDK
FNKQNHRIALNWAQWWNQLTQESILLSRINPEEYKSCSPEALWRYLTARHDWLSIISWIG
EFQTHNSYASLQQNKWPSLTVDVIDQNTCCNDNMRNKILDDLARNGIFLTSELEDFELFL
LRLNHIGGVMQDNLPVQNYRSKEGWDFHSHFILYCLEHNLQYLLYVYLDYYKLSPSNCPF
LEKKELHEAHPWFEFLVQCRQVSSNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHT
LLALATTMYAPGGVSQVVQNEENESCLKKVDPQLLKMALAPYPKLKTALFPQYTAPSVLP
PDITLYHLIQSLLPFDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAIVERLNFAY
YLHHGRPSFAFGTFLVQELTKSKTPKQLIQQVGNEAYVLGLSSFYVPSIGAACVCFLELL
GLNSLKLRVDMKVANIILSYKCRNEDAQYSFIRESLAEKLSKLAAGEKATIEELLILLEE
GIWNSIQQQEIKRLSSESSSQWALVVQFCRLHNMKLSTSYLRECAKANDWLQFIIHSQIH
NYHPEEVKSLLQYFGPVLQDHLRLAFENLSSVSNSRMDNDQFCIKPLKELQRSKEEMTDV
FEILLQCSEEPNSWCWLLVEAVKQQAPVLSVLASCLQDANAVPCLCVWIITSVEDSVAAE
AMGHIKGSVEGHTWDLEDLSVIWRTLLTRQKSKTLIRGFQLFVKDSPLLLMMEMYELCMF
FKNYKEAEAKLLEFQKNLETLETAATRVHTVIPVPWLKEQVCFLLKLMLQQSRTQYELGK
LLQLFVGIEHLFSDGPDVKKLYVLSQILKNTSIAINPVIITTYSLENFQHECKSVLEKLE
MNGQFALARRVAELAELPVDNLVIEEVTQEMQTLKHIDQWSLKQARIDFWKKCHENFKKN
SISSKAATFFFSAQALVACEYPTEEGPSSIEERHLLLTLAGHWLAQEDLVPVEKLEELEK
QIWLCRITRHTLRGCQEEMEPRFSQQISTSGELSFDSLASEFSFSKLAALNTSKYLELNG
LPSKETCEDRLDWKEQKSLNFLIGRLLDDGCVHEASRVCRYFHFYNQDVALVLHCRALAS
GEASVDDLHPEIHALLQSAELLEEEEPRIPLRKVSSSSSLDSQSFVMLPHSDEVVTNLET
LTRKCLHGKNYCRQVLCLYELSKELGCSYTDVATQDGEAMLRAILASQQPNRCKQAQAFI
STQGLEPDTVAELVAEEVTRELLSPSEGAGHKQMSTPAEESQTFLQLTTLCQDRTLVGMK
LLDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLKAARLLTDNHLAPNEEYGLV
VRLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRFHPGDSEKHN
MIALCFSMCREIGENHEAAACIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAESY
AKDSCVRQALHCHRLTKLLTLQIHFLNTGQNTMLINLGHHRLMDCIMALPRFYQASIVAE
AYDFVPDWAEILYQQVILKGDFNYLEEFKQQKLINSSVFEEISKKCKHQQPTDTVVKNLK
KLLTYCEDVYLYYKLAYEHKFYDVVNVLLKDPQTGCCLKDMLAG
NT seq
7335 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagtggtccggaagtgctgctgcaggcagcagttgcatccctaaaacc
atggagcgggtcctacctatgttgttggtgccggtccccgccgaggcaacggggcggctg
ggatcccgggcgcagttgcacagagagcaggaggtgctgggaagcctgacggctgcaggc
agccttcaagtgctttccttggcgcccggcggccggggcgggggtggctgctgcctcgac
ggcccctttcggcactttgtgtgggaggattgtcataaaagtggcacaccaacagacaag
cccagactgctcgctcttagtgaaaattatgaactgctcatctatgaatttaatttgaaa
gatggacaatgtaatggaaccatttcgtatagctatactgaggagacattgcaaaagctc
attgaagatcaaaatatcagtatttccttattatcattgagaattctgtcatttcacaat
aacacatcattattgttcatcaataaatgtatcatcctacacattatattccccgaaaga
gacgctgagattagagtactcaactgtttcacattacccttgcctacacaggcagtggac
agcattattgacacacagctctgcagaggaattcttttcgttttgagtagtttaggctgg
atctacatatttgacatcgtggatggtacacatgtagctcatgtggatttaacacttcac
caagaagatatgtgtaatgagcagcaacaggagccagccaatatttcttcctttatttca
ctgaaagtgtctcaagacctagatgttgtagtgattgtcagctcctccaactccgcagtt
gctctcaacttaaatctatatttcaggcaacacccaggacacatactgcgtgaaagaacg
ctagaagacattcctatcgaaggccctaaggggatagatgaagatgatcctgttaattct
gaccacaacatgaaactgaccaagttttccttccaagtggataggtcttggaaagcccag
ctattgtcattgaataagacaataaagagctccaaactggaggtttcccattgcgctcca
tggttccaggatattttgcatttggagtttcctgaatctagtaaccacagtacgaatgtg
ccaagctggcctttcattccacaggacataacgcacagtcagtataattttccacagaaa
gattataccaagaccagtgatccaggaagagcatggaaagtgatgcacatcagtgaacaa
gaggaacccattgaacttagatgtatgtctgtgacaggattcactgcactatttacgtgg
ggagtggaaaggatgggctgcaccattgtcctttgggatttggaaacccaggaaatgcag
tgctttttccttggccaaaagtgtattcctatagacaatagtggagaccagcaattgtgc
cttgttttgacagaaaatggactctctctgattttgtttggtttgtctcaagaggagttt
ttaaatagactaatgatccatggaagtgccagcaccgtggactctctttgccatctcaat
ggttggggaaggtgctcaatccccatacatgccctagaggccggtatagaaaatcgtcag
ctagacacagtagatttctttttgaagagcaaggaaaatcttttgaatccatcctcaaaa
tcatctgtatctgatcagtttgatcactttccatcccatttatatttaaaaaatgtggaa
gagctgacaccagcattggatttactttgctcagcaattcgagaaagtgattctgaaacc
caaagtaaaaacttctcagaacaattgcttaatcttacactgtcctttcttaacaaacaa
ataaaggagatttttatttatcatgaagacctagatgaacatctacagaaaggagtgaac
attttgaccagctacattaatgaacttcgaactttcatgataaagtttccttggaagcta
acagatgttatagatgaatatgatgtaattgaaaatgttccaaaagtaaaggagagcaat
atctgggagaaactaagtgttgaggacgttattgccaatgccattttaaacaacagaata
ccagaggcacagactttcttcaggattaatagtcattctgctcaaagacttgaggagctg
attagaataggcctagatttggtctttgataatttgaaaaagaacaacataaaggaagcc
tctgaacttttaaagaatatgggctttgatgtaaaagaccagttactcaagatatgtttc
tatacaactgataaaaatatacgggactttttggttgaaattttaaaagaaaaaaattat
ttttctgaaaaagagaatggaactatagactttgtgcatcaagttgagaagttttattca
gaacatttgcaagaaaatatgcagatccagtcatttcccaggtattggataaaagaacaa
gatttttttaagcacaagtctgttttggagtcattcttgaaatatgatcaaaaagataaa
tttaacaagcagaaccatagaattgcattaaattgggcccagtggtggaatcagctaaca
caagaatccatccttctctccaggataaatccagaagaatacaaatcatgttctcctgaa
gccctctggagataccttacagctcgccatgactggttaagcattatctcatggattgga
gaatttcagacccataatagttatgcttcacttcagcagaacaaatggccctctctgact
gttgatgttattgatcaaaacacttgctgtaacgataacatgaggaataaaattttagat
gacctggccagaaatgggatttttcttacatctgaactagaagactttgagcttttcctc
ctaagactgaaccatattgggggtgtgatgcaagacaacctccctgttcaaaactacaga
tccaaagaaggttgggattttcattctcacttcattctctattgtttggaacacaatctg
cagtatcttctttatgtctatcttgactattacaaacttagcccttcaaattgtcccttt
ttggaaaaaaaagaattacatgaagctcacccctggtttgaatttttagtgcagtgtcga
caggtttccagtaacttaacagatcctaaactcatcttccaggctagccttgcaaatgct
cagatactgattcccagcaaccaggccagtgtaagcagtatgctgttggagggacacacc
ctcctcgccctcgctaccacaatgtatgctcctgggggtgtcagccaggttgttcagaat
gaagaaaatgagagctgtttgaagaaagtagatccccagctactgaagatggcattagct
ccttatcctaagctaaaaacggctctcttcccacagtacactgcccctagtgtcctgcca
cctgatattacactctaccaccttattcagtcattattgcccttcgatcccagcagattg
tttggctggcaatctgccaacacactagctataggagatgcatggagtcatctccctcat
ttctctagccccgacctggttaataaatatgctatagtggaacgtctgaattttgcttat
tatttacatcatggacggccatcatttgcatttggtacttttctggtccaggaattaact
aagagcaagacacccaaacagctgatccagcaagtaggcaatgaagcttatgttttaggc
ctctcctccttctacgtaccttcaataggagctgcctgtgtttgtttcttagaattgctt
ggcctcaacagcctcaagcttagagttgatatgaaagtagccaatataattctgagctac
aaatgtagaaatgaagatgctcagtacagctttatcagagaatctctagctgaaaaacta
tctaaactggctgcaggtgaaaaggcaaccatagaagaattgctcattctcttagaagaa
ggtatatggaacagcattcagcaacaggaaataaagaggttatccagtgaatctagcagc
caatgggcattagtggtacagttctgcaggctccacaatatgaaactgagcacatcttac
cttagagaatgtgccaaagcaaatgattggttacaattcattattcacagccagatccat
aattaccatccagaggaggtgaaatcccttctccagtatttcggccctgtccttcaagac
catttaaggctggcttttgagaacttgtcctcagtgtctaactccagaatggacaatgat
caattctgcatcaagcccctcaaggaactccagagaagcaaagaagagatgactgatgtt
tttgaaattctgcttcagtgctcagaggagccaaactcctggtgctggcttctggttgaa
gcagtgaaacaacaggcccctgttcttagtgttctggcctcatgtctccaggatgccaat
gctgttccctgtctttgtgtttggatcatcacttctgtggaggacagtgttgcagctgaa
gcaatgggacacattaaaggctcagtagagggccacacttgggaccttgaggacctctca
gtcatttggagaactttattaacaaggcagaagagcaaaactctcatcagaggtttccag
ctttttgttaaggattccccattactattgatgatggagatgtatgaactgtgtatgttc
ttcaaaaattataaagaagccgaagccaaattactggagttccagaagaacctcgaaact
cttgaaacagcagccacaagggtccacactgttatccctgtcccatggctgaaggagcag
gtgtgttttcttttgaagcttatgctgcagcagagtaggacccagtatgagctggggaag
cttttacagctgtttgttggaatagagcatctcttctctgatggtccagatgtaaagaaa
ctgtatgttcttagccagattttgaagaatacatccatagccattaatcctgtaattata
accacctatagccttgagaattttcagcatgaatgtaaatctgttttggaaaaactggag
atgaatggacagtttgctttagctaggagagtagcagaattagctgagttacctgtggac
aacttggttattgaagaggtaacacaggaaatgcagaccttaaaacacattgaccagtgg
tccctgaaacaagcaagaattgacttctggaaaaaatgccatgagaattttaagaaaaat
tccatttcaagcaaagcagctactttctttttctcagcccaggcccttgtggcctgtgag
tacccaactgaagagggaccgagcagcattgaggagcgccatttgctgctcaccctggca
ggacactggcttgctcaggaggaccttgtgcctgtggagaagttggaggagctggagaag
cagatctggctctgtcgtatcacccggcacaccctcagaggatgccaggaggaaatggag
cccagattttctcaacagatctcaactagtggtgagctttcctttgatagcttagccagt
gagttttcattctccaagttggctgctctgaacacatcaaaatacttagaacttaatggc
cttccatccaaagagacttgtgaggacagactggattggaaggagcagaagtcactaaac
tttttgattggacgcctattggatgatggctgtgtgcatgaagcaagtagagtatgccgg
tattttcatttctataaccaagatgttgccttggtattgcactgcagagcactggcttca
ggggaagctagtgtggatgacctgcatccagaaatccatgccctcctacaaagtgctgag
ctgctggaggaagaagaacctcgcattcctctaaggaaagtctcaagcagttcaagtttg
gatagtcaatcatttgtgatgctgccccacagtgatgaagtggtgactaatctggaaact
ctgacaagaaaatgcctccatgggaagaactactgccggcaggtcctctgtctgtatgaa
ctttccaaggagttgggctgttcctacacagacgttgccacccaggatggtgaggccatg
ctccgagcaatcttggcttctcagcaacccaacagatgcaagcaagcccaagccttcatc
agcacccagggccttgagccagacacggtggctgaacttgtggcggaagaggtgacccgg
gagctgctctccccgtcagagggagcaggacataagcagatgtccaccccagcagaggaa
agccagacatttcttcagctgaccactttgtgtcaagatcgcacgttggtaggcatgaag
ttgttggataagatttcctccgttccccatggggaattgtcttgcactacagagctgcta
atcctggcccatcactgcttcacactgacatgtcacatggagggcatcatcagagtcctg
aaggccgcccggctgctcacagacaaccacttggctcccaacgaggagtatgggctggtg
gtgcgtcttctcactggcattggaaggtacaacgagatgacatacatatttgatttgctg
cataaaaaacactactttgaagtgctgatgaggaagaagttggatccgagtggcaccctg
aagacggccctacttgactacatcaaacgtttccaccctggggacagtgagaagcacaac
atgattgccctgtgcttcagcatgtgcagggagattggggagaaccatgaggcagctgct
tgcatccaactgaaactgattgagtctcagccctgggaggacagcctcaaggacgggcac
caactgaagcagctgctgttaaaagccctgactctgatgctggatgcagcagagagttat
gccaaggactcctgcgtgcgacaggccctgcactgtcaccggctcaccaagttgctaaca
ctgcagattcactttctgaacactggccaaaacacaatgctcatcaacctgggccaccac
aggctgatggactgcatcatggccctgcctcggttctaccaggcttctattgtagctgag
gcctatgactttgttcctgattgggctgaaattctataccaacaagtgatacttaaaggg
gattttaattacttggaagaatttaagcagcaaaagttaataaattccagtgtatttgaa
gagatttcaaaaaaatgtaaacatcaacaacctactgacacagttgtgaaaaacctgaag
aagttacttacatattgtgaagatgtctacttgtattacaagctggcatacgaacacaaa
ttttatgatgttgtaaatgtgcttctgaaggatccacagacaggttgctgtctaaaggac
atgctagcaggttag
DBGET
integrated database retrieval system
