Rousettus aegyptiacus (Egyptian rousette): 107511115
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Entry
107511115 CDS
T06036
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray04151
PI3K-Akt signaling pathway
ray04510
Focal adhesion
ray04512
ECM-receptor interaction
ray04820
Cytoskeleton in muscle cells
ray04926
Relaxin signaling pathway
ray04933
AGE-RAGE signaling pathway in diabetic complications
ray04974
Protein digestion and absorption
ray05146
Amoebiasis
ray05165
Human papillomavirus infection
ray05200
Pathways in cancer
ray05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107511115 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107511115 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107511115 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107511115 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
107511115 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
107511115 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107511115 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
107511115 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
107511115 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
107511115 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
107511115 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ray04147
]
107511115 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
ray00536
]
107511115 (COL4A1)
Exosome [BR:
ray04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107511115 (COL4A1)
Glycosaminoglycan binding proteins [BR:
ray00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107511115 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107511115
NCBI-ProteinID:
XP_016000744
UniProt:
A0A7J8DWB0
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MGPRLGVWLLLLLAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGVSGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFTGNPGPPGLPGMKGDPGEILGHVPGTLLKGERGFPGA
PGTPGLPGLPGIQGPVGPPGFTGAPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GEPGQAQFIEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGS
PGYSGDSGYPGLPGRDGLKGDKGETGPPGPPGIVIGTGPLGEKGERGYPGPPGLRGEPGP
KGFPGLQGQPGSPGIPIPGQPGAPGYPGERGEKGDQGFPGLSLPGPSGRDGPQGPPGPPG
PPGRPGHTDGLVECQPGPIGDRGPPGVPGQPGLAGEVGEKGQKGESCLTCDTEGLRGPPG
PQGPPGEIGFPGQPGAKGDRGSPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDIRLK
GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSIGLKGDRGPPGGVGFPGSRGDI
GPPGPPGFGPIGPVGDKGQVGFPGNPGSPGQPGPKGEAGRVVPLPGPPGAEGRPGSPGIE
GPQGDRGFPGSPGRPGLPGEKGTVGQPGIGFPGPPGPKGVDGLPGDVGLPGSPGRPGLNG
LPGNPGVPGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGNIGGPGVPGEHGAIGAPGLQGI
RGDPGPPGLQGPKGAPGVPGIGPPGVMGPPGRQGPPGSSGPPGVKGEKGFPGFPGLDMPG
PKGDKGTQGLPGLTGQSGLPGLPGQQGTPGLPGFPGPKGEMGVMGTPGQPGSPGPTGVPG
LPGAKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDPLHMETMKGQKGDQGEKGQIG
PTGDKGSRGDPGTPGMPGKDGQAGHPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGVPGLPGGKGAKGEKGQAGLPGIGIPGRPGDKGDPGIAGFPGSPGE
KGEKGTTGLPGMPGSPGPKGSPGSAGYPGSPGSPGEKGDKGLPGLDGIPGIKGEAGLPGK
PGPAGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGSKGEKGSKGDVGFPGLAGSP
GIPGSKGEQGFMGPPGPQGQPGLPGAPGRPVEGPKGDRGPQGQPGLPGPPGPAGPPGLPG
LDGLKGDRGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGIPGSKGDMGPPGLPGFQGLKG
LPGLQGVKGDQGDQGFPGTKGLPGVPGPPGPSQFVKGEPGLPGPEGPAGLKGLQGPPGPK
GQQGVTGSVGIPGPPGSPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTIDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcggcgtctggctgctgctgctgctcgctgccctcctgctccacgag
gagcgcagccgggccgctgcgaagggtggctgtgctggctctggctgtgggaaatgtgac
tgccatggagtgaagggacaaaagggtgaaagaggcctcccagggttacaaggtgtcatt
gggtttccaggaatgcaaggacctgaggggcctcaggggccaccaggacaaaagggtgat
actggagaaccaggactgccaggaacaaaagggacaagaggacccccaggagtatcgggt
taccctggaaacccaggacttcctggtattcctggccaagatggtccaccgggtccccca
ggaattccaggatgcaacgggacaaagggtgagagggggcctctggggcctccaggtttg
cctggattcactggaaatcccgggccaccagggttgccaggaatgaagggtgatcctggt
gaaatactgggtcacgtgcctgggaccctgttgaaaggtgaaagaggattccccggagcc
ccaggaacaccaggtttaccaggattgccaggcattcaaggtcccgttggccctccagga
tttaccggagcaccaggtcccccaggccctcctggccctccaggtgaaaaggggcaaatg
ggcttaagttttcaaggaccaaaaggtgataagggtgatcaaggggtcagtggacctcca
ggagagccaggacaagctcaatttatagaaaaaggagactttgccactaaaggagagaag
ggtcaaaaaggtgaacctggatttcaaggaatgccaggggttggagagaaaggtgaacct
ggaaaaccagggccccgaggaaaacctggaaaagatggtgaaaaaggagaaaaagggagt
ccaggttattctggcgactcggggtacccaggactcccaggccgagacggtcttaaggga
gacaaaggtgaaacaggtcctccaggcccacctggaattgttatcggcacaggacccttg
ggagaaaaaggcgagcgggggtacccaggaccgccaggattgagaggagagccaggcccc
aagggtttcccaggattacaaggccagccaggctctccaggcatcccaataccggggcag
cctggtgctcctggctaccctggtgaaagaggagaaaaaggtgaccaaggatttccaggg
ctgtctttgccaggaccaagtggaagagatggaccccagggccctcctgggccccctgga
ccccctgggcgaccaggccacacagatggacttgtggaatgccagcccggaccaataggt
gaccggggtcctcctggagttccagggcagccaggactggcgggtgaagttggagagaaa
ggtcaaaaaggagagagttgtctcacctgtgatacagagggacttcgtggacctcccggg
ccacagggacctccaggagaaataggtttcccgggacagccaggggccaagggcgacaga
ggttctcctggcagggacggtcttgaaggattgcctggccctcaaggtgtaccagggctg
atgggccagccaggggccaagggagagcctggcgagatttacttcgacattcgactcaaa
ggtgacaaaggagacccaggttttccaggacaacccggtatgccaggcagagcagggtct
cctggaagagatggccatccaggtctgcccggtcccaaaggctccccgggttcaattgga
ttaaaaggagatcgcggtccccctggaggagttggctttcccggcagccgtggtgacatt
ggccctcctgggcctccagggtttggccccattggtcccgttggagataaaggacaagtg
ggctttccaggaaaccctggatccccaggccagccaggtcccaaaggtgaagcaggaaga
gttgtgcctttacctggtccccctggagcagaaggacgtccagggtccccgggtattgaa
gggcctcaaggtgacagaggttttccgggatcccctggaaggcctggcctccccggagag
aagggcactgtcggccagcccgggattggatttccagggcctccaggtcccaaaggtgtt
gatggcttacctggagacgtgggacttccagggagtccaggtcgcccaggacttaatggc
ttacctggcaacccaggtgtgcctggccaaaagggagagcctggagttggtctgccggga
ctcaagggattaccaggtcttcccggcattcccggaacacctggggagaagggaaacatc
gggggaccaggtgttcctggagagcatggagctatcggcgcccccggccttcagggaatc
agaggtgatccaggacctcctggattacaaggtcccaaaggagctccaggagttcctggt
ataggcccccctggagtgatgggccctcctggaagacagggaccaccggggtcatcaggc
cctcctggagtgaaaggggagaagggcttccccggattcccaggcctggacatgccgggc
cccaaaggagataaagggactcaagggctccctggcctcacgggacagtcggggcttcct
ggtcttcctggacagcaggggacacctggacttcctgggtttccaggtcccaagggagag
atgggcgtcatggggaccccagggcagcctggttctccaggaccaacgggcgtgccagga
ttgcctggtgcaaaaggagaccatggctttccaggctcctcgggacccaggggagaccct
ggcttcaagggtgataaaggagatgttggtctccctggcaagcctgggtccatggatcca
ttgcacatggagactatgaagggccagaagggagaccaaggagaaaaaggacaaattgga
ccaactggtgataaaggatcccgaggagatcctgggacaccaggaatgcctggaaaagat
ggccaagcagggcaccctgggcagccaggacctaaaggtgatccaggcataagcggaacc
ccaggtgctccgggacttcctggacccaaaggatcggttggtgggatgggtctgccagga
acacctggagaaaaaggtgtgcctggaatacctggcccacagggggtccctggcttacct
ggaggtaaaggagcaaaaggagagaaagggcaggcgggcctacctggcattggaattcca
ggacggccaggggacaagggagatccagggatagcaggttttccaggaagtcctggagag
aagggagaaaaaggaaccacggggctcccaggcatgcccgggtctccaggccccaaagga
tcaccaggaagtgctggctatccaggaagccctgggtcacctggagaaaaaggtgacaaa
ggcctcccgggattggatggcattcctggcatcaaaggagaagcaggtcttcctggaaag
cctggccctgcaggcccagccggccagaaaggagagcccggcagcgatggaattccgggg
tcagcaggagagaagggtgaaccaggtctacccggaagaggattcccagggtttccaggg
tccaaaggagagaaaggttcaaagggtgatgtgggtttcccaggattagctgggagccca
ggaattcctggatccaaaggagagcaaggattcatgggtcctccggggccacaaggacag
ccgggattgcctggagctccgggccgccctgtggaagggcccaaaggagaccgaggtcca
cagggacaacctggcctgccagggccccctggaccagcggggcctccagggctccctggg
cttgatgggctgaaaggtgacagaggaaacccaggctggccaggggctcctggtgttcca
ggacccaagggagacccaggattccaaggcatgcctggaattggtggctctccaggtatt
ccaggttctaagggtgacatgggacctccaggacttccaggatttcagggtctgaaaggt
ctccctggtcttcagggagttaaaggagatcaaggagaccaaggtttccctggaaccaaa
ggtcttccgggtgtccctggacccccaggtccttcccagttcgtcaaaggggagccaggg
ctccctggtcctgagggtcccgcaggtctgaaggggcttcagggacctccaggccccaaa
ggacagcaaggtgtgacgggatctgtgggcatacctggaccaccaggtagtcccgggttt
gatggtgctcctggccagaaaggagagacaggaccctttggacctcctggtccaagagga
tttccaggaccaccaggccctgatgggttgccaggatccatgggtcccccaggcacccca
tctgttgatcatggctttcttgtaacaaggcacagtcaaacaatagatgacccacagtgt
cctcccggaaccaaaattctttaccatgggtactctttgctctacgtgcaaggcaatgaa
cgggcccacgggcaggacttgggcacagctggaagctgcctgcgcaagttcagtaccatg
cccttcctgttctgcaatatcaacaatgtctgcaacttcgcttcccgaaatgactattcc
tactggttgtccactccagagcccatgccaatgtctatggcacccatcgctggggacaat
attagaccgtttattagcaggtgtgcggtgtgtgaggcgccagccatggtgatggccgtg
cacagccagaccattcagatccctccatgccccaacgggtggtcctcgctctggattggc
tattcctttgtgatgcacaccagtgctggtgctgaaggttctggccaagccctcgcgtcc
cctgggtcctgtctggaagagttcagaagtgcaccgttcatcgagtgccacggtcgtgga
acttgtaattactatgcaaacgcttacagcttttggcttgccactatagagagaagtgag
atgttcaagaagcccacgccatccaccttgaaggccggggagctgcgtacgcatgtcagt
cgctgccaagtctgtatgagaagaacataa
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