Rousettus aegyptiacus (Egyptian rousette): 107512119
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Entry
107512119 CDS
T06036
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ray03041
]
107512119 (YTHDC2)
Enzymes [BR:
ray01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107512119 (YTHDC2)
Spliceosome [BR:
ray03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107512119 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
HA2_N
Ank_2
AAA_19
nSTAND3
Ank
AAA_22
ATPase
PhoH
AAA_7
AAA_16
AAA_29
Ank_4
T2SSE
ABC_tran
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
107512119
NCBI-ProteinID:
XP_016002801
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MSRPSSVSPRPPAPGGGGGGGGSGGGGGLAQCGPGGGGRAKGLKDIRIDEEVKIAVNIAL
ERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHA
MMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNG
IPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDD
CFKNGIPCRIFCTQPRRLAAIAVAERVAVERRERIGQTIGYQIRLESRVSPKTLLTFCTN
GVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDV
NLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTE
WYSAQENTFKPESQRQRTVPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACL
SDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGADV
HSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLK
AYHHSFDDEKVDLDLIMHLLYNICHNCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNT
HRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKS
FDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPL
QELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLA
DLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGT
FSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRAR
GGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENVLLTGPKEKKVRFHPTSVLSQPQ
YKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNA
LQEPTSFRADGIPNDSSDSEMEDRTTANLAALKLDEWLSFKLEPEAASLLLQLRQKWHSL
FLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSW
RSNNSRKSSADTEFSDESTTAERVLMKSPSPALHPPQKYKDRGILHPKRSTDDRSDQSSV
KSTDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWSTT
PSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEW
IRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGEKTTTD
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgagcagcgtctccccgcggccgccggctcctggtgggggcggcggcggt
ggtggcagcggcggcgggggcggcctcgctcagtgtggcccggggggcggcggccgggcc
aaggggctgaaggacattcgtatagacgaagaggtgaagatcgcagtcaatatcgctctg
gagcgcttccgatatggggaccagagagaaatggaatttccttcttctctgaccagtacc
gaaagagcctttatccatcgattaagtcagtctcttggtttggtctctaaaagtaaagga
aagggagcaaatagatacctaactgtgaagaagaaagatggatcagaaacagctcatgca
atgatgacctgtaatttgactcataatacaaaacatgctgttaggagcctaattcaaaga
tttcctgtcaccaataaagagcgtactgaacttctgcctaaaacagaaagaggaaatgtg
tttgcagttgaagctgaaaaccgggaaatgagcaagacaagtgggcgactcaacaatggc
atacctcaaattccagtgaaaagaggagaatccgaatttgattctttcaggcagtctctg
ccagtgtttgagaaacaagaagaaattgttaaaataattaaggaaaataaagtagttttg
attgtaggagaaactgggtctggaaagactacgcagatcccacaatttcttttagatgat
tgttttaaaaatggtatcccctgccgtatattttgtactcaaccaagacgattagcagct
attgctgtagctgaaagagttgctgtagagagaagagagaggattggtcaaacaattggg
tatcagatacgattagaaagcagggtttctccaaagacacttctgacattttgcacaaat
ggagtattgcttcgtacattgatggcaggagatagtacattgtcaactgtgacacatgta
attgtggatgaagtacatgaaagggatcgatttagtgattttctacttacaaagttaaga
gatttgttgcaaaagcacccaactttgaaactaattctgtctagtgcagccttggatgta
aatctgtttataagatattttggaagttgtccagtgatatatattcaaggaagaccattt
gaagtaaaagaaatgtttctggaagacattttaagaactactggatacacaaacaaagaa
atgttaaaatacaaaaaggaaaaacagcgagaagagaaacaacaaaccacacttacagaa
tggtattcagctcaagagaatactttcaagcctgaatctcagaggcagagaactgttcca
aatgtgactgaagagtatgatttattggatgatggtggtgatgccgtgttcagtcagttg
acagaaaaagatgtgaattgccttgaaccatggttaataaaggaaatggatgcttgtctt
tctgacatatggctgcataaagatgttgatgcctttgctcaggtttttcaccttatttta
actgaaaatgttagtgttgattacagacatagtgaaaccagtgcaacagctttgatggtt
gctgcaggacgaggtttttcaagtcaagtagagcagttaattagtatgggagctgatgtc
catagcaaagcatcaaatggctggatggctttagattgggctaaacactttgggcagact
gaaattgtagatcttctggaatcttacagtgcttcattggagtttggaaatctagatgaa
agttctctggttcaaacaaatggaagtgacctcagtgcggaagacagagaactcctgaaa
gcttatcatcatagttttgatgatgaaaaagtagacttggatttgatcatgcatcttcta
tataatatctgccataattgtgatgctggtgcaatattaattttcctacctggatatgat
gaaattgttggattgagagatcgcatcctatttgatgacaagcggtttgctgacaataca
catagatatcaagtctttatgcttcattcaaatatgcaaacatctgatcaaaagaaagta
ttaaaaaacccacctgcaggtgttcgaaaaataatcctttctaccaatattgctgaaacc
agcatcacagtcaatgatgttgtctttgttattgattctggtaaggtgaaagagaaatcc
tttgatgcactgaattttgttacaatgttaaaaatggtttggatttccaaagctagtgcc
atacaacgaaaaggcagggcaggacgatgtagacctggaatttgtttccggttgttcagt
agactccgattccaaaatatgttggaatttcagactccagaacttttgagaatgccatta
caggaactttgcttacataccaagctattagccccagttaattgtccaattgctgatttc
cttatgaaagctcctgaacctccaccagctctaattgtaagaaatgctgtacagatgctt
aagacaatagatgcaatggatacctgggaagatctcactgaactgggatatcatttggct
gacttgccagtagaaccacatcttggtaaaatggtcctgtgtgctgttgttttaaagtgt
ctggaccccatccttacaattgcctgcacactagcctatcgagatccttttgtcctgcca
actcaggcctctcaaaaacgtgcagctatgctttgtagaaaacgtttcactgcaggaact
ttcagtgatcatatggcacttctcagagcattccaggcatggcagaaagcacgaagtgat
gggtgggagcgagccttttgtgaaaagaattttctttcacaagctaccatggaaataatc
ataggcatgagaactcagttgcttggtcaacttagagcatcaggttttgttagagcacga
ggtggtggtgacattagagatgttaacacaaattccgagaactgggctgttgttaaggct
gcattggtggcaggcatgtatcctaatttagtccatgtggacagagagaatgtattgttg
acagggccaaaggagaaaaaagtacggtttcatcctacttcagttctcagtcagccgcaa
tataaaaagattcctccagccaatggtcaagctgcagcaattcaggcactgcccacagat
tggcttatttatgatgaaatgaccagagcccatcgaatagctaacattagatgttgttcg
gcagttacacctgtcactgtattagtattctgtggaccagctagattggcaagtaatgct
cttcaggaacctacatcctttcgagcggatggtattcctaatgacagtagcgatagcgaa
atggaagatagaactactgctaacttggcagctttgaaacttgatgagtggctcagtttc
aaactagagcctgaggcagccagtttattgctgcagctcagacagaagtggcacagctta
tttttacgccgaatgagagctccatctaaaccttggtctcaagttgatgaagctaccatt
agagcaattatagctgttttaagtactgaagaacagtcagcaggtttacaacaaccatct
gggattggccaaaggccaaggcctatgtcttcggaagaacttcctttggcatcatcttgg
aggtcaaataatagtaggaaaagttcagcagatactgaattttctgatgagtctactact
gcagaaagagtgttgatgaaatctccatctccagcactacatccacctcagaagtacaaa
gatagaggaattttacatcctaaacgaagcactgatgaccgatcagatcaatcttctgtg
aaatctacagatagcagtagttacccaagtccgtgtgctagtccttctcctccatcctca
ggaaagggttcaaaatctccttcaccaagaccaaacatgcctattcgatacttcataatg
aagagtagcaatttgagaaaccttgaaatttctcagcagaagggcatctggtctacaacc
cctagtaatgagcggaagctaaatcgagccttttgggaaagcagcatggtttacttggta
ttttctgttcaaggatctggacatttccagggattttctaggatgtcttctgagatagga
agggagaagagccaggactggggctcagctggactaggaggagtatttaaggtggagtgg
atacgaaaagaaagtcttccctttcagtttgcacaccatttactcaatccttggaatgat
aacaagaaagttcagataagcagagatgggcaggaactagaacctcaggttggggaacaa
ttgctccagttatgggaacggcttccattgggagaaaaaaccacaactgattga
DBGET
integrated database retrieval system
