Rousettus aegyptiacus (Egyptian rousette): 107512535
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Entry
107512535 CDS
T06036
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ray03019
]
107512535
Enzymes [BR:
ray01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107512535
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107512535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
107512535
NCBI-ProteinID:
XP_016003666
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MASATIMLNEKSNPSNSESESESDSEIDSDDDTETTESLCSFDQSEEEDYLSSEDIIEES
ASGHLPCEFEINEEKLSEVKAIDVSSSDFERPDLTEYKKILKDLSSLIWKTLSKSKMVNL
LKDFVESEFFLIDGDSLFITCVFNVNFKKGQTLHFFYIVEQFLHDFIQKEARFVIVFFKD
AENMYFNYPELLALRTILIQHLEYNTDVTIYTEFSNCLSPEWEIFLKECYPYFLIVSHEG
ITPHQTDFLNIFMIHALYQKINIVQSSEIESDVLRIYGHYASSCYLHKQFFEKHEIQLRH
VLHVYIREYYQKSQETEIVLYGHLKLNFGCVQKEIHQTLSLLQNLWPEGADVRSVVCSIS
CSVTLKLYKKMLYNAQDCENLNTGTENHNVQDLKPLALNEAADLCRMHCLSVIFLQHLPL
FQRAKSRIITCIWDRALPPFLRMLKKCTFFILKQLKARNNWNVNFTGLPDLTDNSLWKNI
VYYYEIEYSRGLNLGLGDTLMQEYQKLWNTVLTLSGDEDFGGPIPIRTTARLFLTQKETT
PRGSNQEIQKLGLIPLKAEIIEDYAGDILSELPFLSSDDPAITSLSKKKEFDELIHWHSF
RPLSDDFERTRCNSDTKSKSAKERREIQKLHLFYYNLGKSLVGSNRSVKFITGGTLPPPE
NSSMKKNTKLQRTNAEKFIEENQKRQLAKLEKRQEERWNNLSLHIEKEIKENFNSGIKRL
ENFLQTCSVKSVRFTAEMVGLDTCFKLWMECCLKPEGESRDISIIINLMKKVHILHEKYS
ELLQNTHRRKLAKYLKYIGFDNLAYSLCPQVQESGTKKDISKYSVHMGAARFQLTYMSPY
LFREERSDPDPRVHHFIPDTWQRELLDVVDNNESAVIVAPTSSGKTYASYYCMEKILRES
DEGVVVYVAPTKALVNQVVGTVYSLFTKALPKGLVVCGVFTRDYRHDTLNCQILVTVPQC
LEILLLSPHRQEWVKRMRYVIFDEVHCLGGEIGAEVWEHLLAMIRCPFLALSATISNPEH
LTEWLVLIKRYWQHVESTVENSGPSQNALKASKKQQRKRIEKPSYRVRLVWYKERYNDLE
KYVCSLKDNDFIIEHYHSCAALTVNHIKKYGIPLDLGFSPRESILLYDAMVHIWPEWTRM
QELEPEEFSCFKNKIVIMRADAKKYEEELKKEIIRWIQLDPSKVNQLLEYLKPQNFDSPE
TKRQKMFPCFVEKLKEMDKLPAIFFSYNIHSVEISASRVLMNLIDKQNTHNDPNSEKKKN
YLIKKLKKARSSQKRNISTFLKSDSSARIQRIILLGAEIKEIRKNLKKYNEFSPDCTYTD
STAVDNQTLAKILRRLRGTRQGYKLQCLLKRGIGYHHGSMEYKQRQVVEMLFRQKHVKVV
TATSSLALGINMPCKSVVFMEDSVFLDALNFRQMSGRAGRRGEDLIGNVFFYGIPLPKIE
RLLKSNVPKLKGQFPLSISLVLRLMLFVAKADDKEDAKAKALSVLQHSLMSFKQPKIKCM
LKFYFIYSLQFLATEGYLNSEGIPIGFSGLVSHLHYHEPANFVLVSLLEKCLFHKLCIPI
NIDGQKTFSKDVMETLVVVLANLFGRRYLPSCVKYLKKKFSHSMVILDALPKEFATVVEE
HNNRIRENFGSFLLSISNLADMRKEYQLPLSEIDFSGKECEDSELVSHLMPGTESRTAVS
PFACLSDITDRDLFDMDVVNDAMLRTICVNVNNVPFLSLVKYNKNGRKCPLNGYALNFYK
NGSLSALTVDNWLNMGDAFNLIRDFVLVIQSIRISLSELCDDKDDNVVLAFKQLSEEFKT
KLWRKKNKDC
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcgactattatgttgaatgaaaaatcaaaccctagtaacagtgaaagtgaa
agtgagagtgattctgaaattgacagcgatgacgacactgagaccacggagagcttgtgc
tcatttgatcaatctgaagaagaagattatctaagctcagaagacataatagaagagtca
gcttctgggcacttaccttgtgagtttgaaatcaatgaagagaagctttcggaagttaaa
gctatagatgtcagcagctctgattttgaaagaccagatttaactgaatacaagaaaatt
ctgaaagatctctcatcattaatttggaaaactctgtcaaaatctaaaatggtgaactta
cttaaagactttgttgagtctgaattttttttgattgatggagattcattattcatcact
tgtgtttttaatgtgaacttcaagaaaggacaaactcttcacttcttctatattgtagaa
caatttctacatgatttcattcaaaaagaagccagatttgtaatagttttctttaaggat
gcagaaaatatgtattttaattaccctgaacttctggcccttcgtaccatattgattcaa
catttagaatataatactgatgtcactatttatacagaattttccaactgtttgtcacca
gaatgggagatatttcttaaagaatgttatccgtatttcctaattgtttcacacgaggga
ataactcctcatcaaactgacttcttaaacatttttatgattcatgctctttaccagaaa
atcaatatcgtacagtcttcagaaatagagtcagatgtccttagaatttatggacactat
gcctcaagttgctatttacacaaacaattttttgaaaagcatgagatacaactgcgacat
gtcttacatgtctacataagagagtattatcaaaaatctcaggaaacagaaatagttctg
tatggtcacttgaaactaaacttcggatgcgtacaaaaagagatacatcaaaccttgtcc
ttgcttcagaatttgtggccagaaggagctgatgtcagaagtgttgtctgctccatttca
tgctctgtaacactaaaactctataaaaaaatgttatataatgcacaagactgtgaaaac
ctaaacacaggcacagaaaatcataacgtgcaggacttgaaaccacttgcactaaatgaa
gcagcagatctttgcagaatgcactgccttagtgtgattttccttcaacatttacccctg
tttcaaagagcgaagagtagaatcattacttgtatttgggacagagcacttccaccattt
ctaagaatgctgaagaaatgcacatttttcatactaaaacaattaaaggctagaaataat
tggaatgtgaatttcactggcctgcctgacttaacagataatagtttgtggaaaaatatt
gtttattattatgaaattgaatatagtagagggctaaatttgggattaggtgacactttg
atgcaggagtatcagaagttgtggaacacggtcttaacattatcgggggatgaggatttt
ggaggacccatacccattaggacaacagccagactgtttcttacacagaaagaaacaaca
cctagaggatcaaatcaagaaattcaaaaattgggactcattcctctgaaagctgaaatt
atagaagattatgccggagatattttgtcagaactaccttttctaagcagtgatgaccca
gctattacatctctttctaagaagaaagaatttgatgaactcatacattggcattctttt
agacctctcagtgatgattttgaaaggactaggtgcaacagtgatactaaatccaaaagt
gccaaagaaagaagggaaatacagaaattacatctgttttattacaacttgggaaaatct
ttggtaggaagtaacagatcagtaaagtttataacaggaggaactctaccacctccagaa
aattcttccatgaaaaaaaacacaaaactccagaggacaaatgcagaaaaatttattgag
gaaaatcaaaagagacaactagctaaactagagaaaagacaggaagaaagatggaataac
ttgtccttacatattgaaaaggaaattaaagaaaattttaattctggaataaaaagacta
gaaaactttcttcagacatgctctgttaagtctgtaagatttactgcagaaatggtagga
ttggatacctgtttcaaattatggatggaatgctgtttaaaaccagaaggagaatccaga
gatataagcataataattaatttaatgaaaaaggttcacatacttcatgaaaaatattca
gaactactacaaaatacacatcgacgaaaattagccaaatatctaaaatatattggattt
gacaacttagcatactcattatgtcctcaggtgcaggaatcaggtactaagaaggatatt
tctaaatattcagttcacatgggagcagctcggtttcagttaacatacatgagcccttac
ttatttcgagaagaaagaagtgatccagatcccagggttcatcattttatacctgacaca
tggcagagagaacttcttgatgttgtagataataatgaatctgctgtaattgttgctccg
acgtcatcagggaaaacctacgcttcttactactgcatggagaaaatcctgagagagagt
gatgaaggggtggttgtgtatgttgctccaacaaaggctcttgttaatcaagtggtagga
actgtctacagtttatttaccaaagcattgccaaaaggattagtggtgtgtggagttttt
acaagagattaccgtcatgacaccttgaattgtcagatattggtgacagtacctcagtgt
ttggaaatactcttgctatcacctcatcgacaagagtgggtgaaaaggatgagatatgtc
atatttgatgaggttcactgtcttgggggagaaattggagcagaagtttgggaacatctt
cttgctatgattcggtgtccctttctggcactttctgctactatcagtaatcctgaacat
ctcactgaatggttggtgttaattaaaagatactggcaacatgttgagagcacagtggaa
aattctggtccatcacaaaatgccttgaaagcttcaaagaaacaacaaagaaaaagaata
gaaaagccatcatacagagtcagactggtatggtacaaagagcgatacaatgatctagag
aagtatgtgtgttctctaaaggataacgactttatcattgaacactatcactcatgtgct
gcacttacggtcaaccatataaagaaatatggaattcctttagaccttggattttctcca
cgggaaagcatattgctttatgatgctatggtacacatttggccagaatggacaagaatg
caggagttagaacctgaagaattcagctgcttcaaaaataaaatagtaatcatgagggca
gatgctaagaaatatgaggaggaactaaaaaaggagataattcgttggattcagctggac
ccaagcaaggtaaatcagttactagagtacctcaagcctcaaaattttgacagtccagaa
actaaaaggcaaaaaatgtttccttgttttgtggaaaaacttaaagaaatggataagctg
cctgcaatatttttttcatacaacattcattcggtggaaatatcagcttcaagagttctt
atgaatctgatagataaacaaaatactcacaatgatccaaattctgaaaaaaaaaaaaat
tatttgatcaagaaactgaagaaagcaagaagttctcaaaagagaaacatttctactttt
ttaaaatcagattcaagtgctagaattcaaagaatcattttattgggagctgaaataaaa
gaaataagaaaaaaccttaagaagtataatgaattttctccagactgtacttatactgat
tctacggctgtggataatcagactttagcaaagatcttacgcagattgagaggaacaaga
caaggctacaaactgcaatgtctgttaaaacggggcattggatatcatcacggctcaatg
gaatataaacaaagacaagtcgtagagatgcttttcagacagaagcatgtcaaggtggta
acagctacctcctcccttgctttgggaattaatatgccatgtaaatctgttgtttttatg
gaagattctgtttttctagatgccttgaactttcgacagatgtctggtcgtgcaggaaga
cgtggagaagatcttataggaaatgtgtttttctatggtattccattacctaagatagaa
agactcttgaagtcaaacgtgcccaagctgaagggtcagtttcctctaagcatatccttg
gttctcagactcatgctgtttgttgccaaagcagatgacaaagaggatgctaaagcaaag
gcattatctgttctccaacattcattgatgtccttcaagcaaccaaagatcaagtgcatg
ttaaagttttactttatatattctttgcaatttttggccacagaggggtacctgaattca
gagggtattcccattggattttctgggcttgtgtcccatttgcactaccatgaacctgca
aactttgttttagtaagcttgctggagaaatgtttatttcacaagttgtgtattccaatc
aacatagatggccaaaagacgttttcgaaagatgtgatggaaaccttagtggtggtgtta
gcaaacctttttggaagacggtatcttccttcctgtgtgaaatacttgaaaaagaaattt
tctcattcaatggtaattctagatgctcttcccaaggaatttgctacagtggtagaagaa
cacaataacagaattagagagaattttggttcctttctcctatcaatttctaatttggct
gacatgagaaaagaataccaactacctctctcagaaattgatttttcaggtaaagagtgc
gaagactctgaactggtctctcatttgatgcctgggactgaaagcagaactgctgtctcc
ccgtttgcttgcctgtcagatataactgatcgagatttatttgatatggatgtggtaaat
gatgctatgctacgaacaatttgtgtcaacgttaacaacgttcctttcctttccttggta
aaatataataaaaatggaaggaagtgcccattgaatggttatgcattgaatttctacaaa
aacggttccctgtcagcactcactgtggataattggttaaatatgggagatgcttttaat
ttaatcagagattttgtacttgttattcagtccatcaggatttcactaagtgaattatgt
gatgacaaagatgacaatgttgtgttagcatttaaacaactaagtgaagaattcaagacc
aaactttggagaaaaaaaaataaagactgttaa
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integrated database retrieval system
