Rousettus aegyptiacus (Egyptian rousette): 107512537
Help
Entry
107512537 CDS
T06036
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X2
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ray03019
]
107512537
Enzymes [BR:
ray01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107512537
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107512537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Abhydrolase_11
Motif
Other DBs
NCBI-GeneID:
107512537
NCBI-ProteinID:
XP_016003668
LinkDB
All DBs
Position
Unknown
AA seq
1713 aa
AA seq
DB search
MGLKECTVFLKKISELVLNEMPKADYSSIFNDFAESEFFLIDGDSLLVTCFCEKSLKQGQ
ELHFFYLVECYLMDLIRKGGQFAIVFFKDAEYAYFNFPEIIPLRTALILHLQQNTTIDVL
TKFSGCLSQEWEIFLEKSCPYFLIVADEGLNNLQTYLFNFLIIQSWAMKVNVVISSGQES
DILRLYAFFMPSKLKNQEFLKKNEQKIENAYKTLIKHLEECRVLVLATLFGNLKWKNIME
ETCETISLLKQLWPEGSDIRRVLCVTSCSMTLRMYYHFLENRRKTASDEKTNIQKVVNNC
LTLQEMEDLCKLHCLSVVFLLHLPLSQRASTRVIISPWIKDIQTFLKMKKWCEYFILHNI
NIFEFWNLNLIHLCDLSDEILLKNIAFYYENENVQGLHLNLGNVIAKDYEHLWNTVSKLV
RKFDVGKPFPLRMTKLHFLEKNPLPIKDISKEKMPNLGFIPVSSEVVHEFVGDILKDLPF
LKSNDPIVTSLVKHKEFDELVHWHSHRLLSDDHDRTKCQFDEKSRNPYYLKSAQKYYVFQ
RFYGNSLESVSSKLIVTQAIKPKNFSEPKSKKAKETKAEIITRENKKRLLAKEEQKEEKK
WNVLSFSIEEELKENLNSGIKNLEDFLKLCKSNLVKVKVEMVGLTACLKAWKEHCRGQEK
GKTTKDLSIAVQMMRRIHSLMEKYPEFLQEADLQLIARCLQYLGFDELANSLSPTEVAGD
DIKEKKKNIYSVGIGPVRFQLQYMGHYLLRDERKDPDPRVQDFIPDTWQRELLDVVDNNE
SAVIVAPTSSGKTYASYYCMEKVLKESDEGVVVYVAPTKALVNQVAATVYSRYTKNIPNG
GSLCGVFTREYRHETLNSQVLITVPACLEILLLAPHRQAWVKKIRYVIFDEVHCLGGEIG
AEIWEHLLVMIRCPFLALSATISNPEHLTEWLQSIKWYWKQTDSIIEKNNASKRNDGYRA
NFHKDYLRMKQSYKVRLVLHGERYNDLEKHICSVKHGEIYFDHFHPCAALTTDHIERYGF
PSDLILSPRETVQLYDTMFEFWESWPRAQELCPEKFLHFKDKIVIKKLDARKYEESLKAE
LTNWIKNGNAEEAKMVLRNLSPNSAFGSENMEKMFPLLVEKLRKMEKLPALFFLFKLRDV
EQNALNVSTFLKEKQERERPPQADKEAHVMANKLRKVKKSIENQKAIDEKSQKKPRKMDQ
SLIREAEYNNLLKILEKNLAISQEYTYADRKAVDTETLKMVFDRVQHSMKGGELKALAER
GIGYHHRSLSFREKQLVEILFRKGFIRVVTATGTLALGINMPCKSVVFAQNSIYLDALSY
RQMSGRAGRRGQDLMGDVYFFNIPEPKIEKLIKSNVPELRGQFPFRISLILRLMLLASKG
DDPEDAKAKVLSVLKHSLLSFKQPRITKMLKLYFLFSLQFLVKEGYLDQEGNPVGFAGLV
SHLHYHEPSNLVFVSFLVRGLFHNLCQPTQKGSKHFSQDVMEKLVLVLANLFGRKYLPAK
FQDATVKFYQSKVFLEALPEDFGAALNEYNMSVTKDFASFLLIVSNLADMKQEYQLPVSK
INFTGKEYEDSQLVSHLMSCKEGKVAISPFVCLSGNSDSDLLQPETPEHVILRTIGISHA
QVPVLWSQKIDGQGRRMPLNAYALDFYKHGSLIGLVQDNRMNEGDAYQLLKDFSLTIQSI
SVSLRELCENEEDNVVLAFEQLSETFSEKLKKV
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaaaagaatgcacagtgtttttaaagaaaatatcagagttagttttgaatgaa
atgccaaaagctgattattccagtatattcaatgattttgctgaatctgaattttttctg
attgacggagattcattacttgtcacgtgtttctgtgagaaatcattaaagcaggggcag
gagctccacttcttctatctggttgaatgctatcttatggatcttattaggaaaggagga
caatttgccatagttttcttcaaggatgctgagtatgcatatttcaacttcccggaaatt
attcctttgagaactgctttaattcttcatcttcagcaaaataccaccattgatgttcta
acaaaattttctggatgcttatcacaagagtgggaaattttcttggaaaagagttgtcca
tatttcctgatagttgcagatgaaggcctgaacaacctgcaaacataccttttcaacttt
ttaatcattcagtcctgggcaatgaaggtcaatgttgtgatttcttcagggcaagaatct
gatattcttcgactttatgcattctttatgccaagcaagcttaaaaaccaagagtttctc
aagaagaatgaacagaagattgagaatgcttataaaactctgattaaacatttggaagaa
tgtagagttttggtattagcaaccctttttggaaatttaaaatggaaaaatatcatggaa
gagacatgtgaaactatttctctccttaagcaactctggccagaaggatccgacattcgg
cgcgttctttgtgttacttcatgctcgatgactttgagaatgtactatcactttttagaa
aacagaaggaagactgcctctgatgagaaaactaacatccaaaaggtggtaaataattgc
ttaaccctgcaagagatggaagatttgtgtaaactgcattgtctcagtgtggtttttcta
ctccacttacctctttctcaaagagcttctactagagtcatcatttccccttggattaag
gacattcagactttcttaaaaatgaaaaagtggtgtgaatatttcatcctacataatata
aacatttttgaattttggaatctgaatttaattcacctttgcgatttaagcgatgagatt
ttgttgaagaatattgctttttactatgaaaatgaaaatgttcaaggcttacatttgaat
ttgggaaatgtcattgcgaaggattatgaacatctctggaatactgtatcaaagttggtc
agaaagtttgatgttggaaagccatttcctctgagaatgacaaaacttcattttcttgag
aagaatccattaccaatcaaagacatctccaaggaaaagatgcccaatttggggtttatt
ccagtgtcatctgaggtggttcatgaatttgttggagacattttgaaagacttacctttc
ctaaagagcaatgatcctattgtaacttcactggttaaacataaggaatttgatgaactt
gtgcattggcattctcacagactccttagtgatgatcatgacagaacaaagtgccaattt
gatgaaaaatctagaaatccttattatcttaaatctgcgcaaaagtattatgtttttcaa
cgattttatggaaattcattagaatcagtctcttccaaactcattgtaactcaagctatc
aagccaaagaattttagtgaacccaagagcaaaaaggcaaaagagaccaaggctgaaata
attactagagagaataagaagaggttattagccaaggaagaacaaaaagaagagaaaaaa
tggaatgttttgtcgttttctattgaggaggaattgaaagagaatttaaactctggaata
aaaaacctggaagattttttgaaattgtgtaaaagtaacctagtgaaagttaaagtggaa
atggtagggcttactgcctgcttgaaagcttggaaagaacattgcagaggccaagaaaaa
ggtaaaaccacaaaagatttaagtattgctgttcaaatgatgagaaggatccactccttg
atggaaaaatacccagaatttttgcaagaggcagatctgcagctcatagccagatgtctt
cagtatttaggatttgatgagttggcaaattctctatctccaacagaggttgcaggagat
gacataaaggagaagaaaaagaatatatattcagttggcattgggccagttcggtttcaa
ctgcaatacatggggcattatttgcttcgagatgagagaaaagatccagatcccagagtt
caggattttattcctgacacatggcagcgagagctcctcgatgttgtggataataatgaa
tcagcagtgatcgttgccccaacatcctcaggcaaaacctatgcttcctactactgcatg
gagaaagtgctgaaggagagcgacgaaggggtggttgtatatgttgcaccaacgaaggcc
ctcgttaatcaggtggcagcaactgtttacagccgttataccaaaaatattccaaatggt
ggatctctgtgtggtgtttttacaagggaatatcgtcatgaaaccctaaacagtcaggtg
cttattacagtgcctgcctgccttgaaattctgctgttagctcctcatcgccaagcatgg
gtgaaaaagatcagatacgttatatttgatgaggtccattgtcttggtggagaaattgga
gcagaaatttgggagcatctccttgtcatgatccgatgtccctttctggctctttctgct
acaataagcaaccctgaacaccttactgagtggctacaatcaataaaatggtactggaaa
caaacagacagtataatagaaaaaaataatgcttctaaaagaaatgatggctatcgtgcc
aattttcacaaagactacttgcgaatgaagcaatcatataaagttagacttgtgctccat
ggagagagatacaatgatttagagaagcatatatgttcagtaaaacacggtgagatttat
tttgatcattttcacccatgtgctgcactaacaacagatcatattgaaagatatggattc
ccttctgatcttatcctttcacctcgagaaactgtccagctttatgacaccatgtttgaa
ttctgggaaagttggcccagggcccaggagttgtgtccagaaaaattccttcattttaag
gataaaatagtcattaaaaagttggatgctaggaaatatgaagagagcttgaaggcagaa
ttaacaaattggattaaaaatggcaatgcagaggaggccaaaatggtcctgcggaatctt
agtccaaattcagcttttggttcagaaaacatggaaaaaatgtttccacttctcgttgaa
aagctaagaaaaatggaaaaattgccagcactattttttctattcaagttaagagatgta
gaacagaatgctctaaatgtgagcactttcctgaaggagaagcaagagagagaaaggcct
ccccaagctgataaagaagcccatgtcatggctaacaaacttcgaaaagttaaaaaatcc
attgagaaccaaaaggctatagatgaaaaaagccagaagaagcccagaaaaatggatcaa
agcctaattcgtgaagccgaatataataatttactcaagattctagagaagaacctggca
atctctcaagagtacacatatgctgatcgaaaagcagtggacactgagactttgaagatg
gtgtttgatcgagtacaacactcaatgaaaggtggagaactgaaggctttggctgagagg
ggtattggataccatcaccgatctttgagcttcagagaaaaacagctagtcgagattctt
tttaggaaaggatttattagggtggtgacagctactggaacacttgctttaggaatcaat
atgccttgtaaatctgtggtttttgctcaaaactcaatttatcttgatgctttaagttac
agacagatgtcagggcgtgctggaagacgaggtcaagatctgatgggagatgtatacttc
tttaacattccagagcccaaaatagaaaaactcataaaatccaatgttcctgagctgaga
ggacagttccccttcaggataagcctgatcctgcgactcatgctcctggcatcgaaggga
gatgacccagaggatgccaaggcaaaggtgctgtcggtcctaaagcattcgttgctgtcc
ttcaaacagcccagaatcacgaagatgttaaaactttacttcttgttttctttgcaattc
ctggtaaaagagggctatttagatcaagaaggtaatccggtggggtttgctggacttgta
tcacatttgcattatcatgagccttctaatcttgtttttgtcagttttcttgtaagaggc
cttttccataatctctgtcaaccaacccagaaaggctcaaaacatttttctcaagatgtt
atggaaaaactagtgttagtattggcaaatctgtttggaagaaaatatcttccagcaaag
ttccaagatgctactgtcaagttttatcaatcaaaggtgttccttgaggctctacctgag
gatttcggggctgctttaaatgaatataacatgagtgttacaaaggattttgcctccttc
ctactaattgtttccaacttggccgatatgaaacaggaatatcaactgccagtgtcaaaa
ataaatttcacaggtaaagaatatgaagactcccaactggtgtctcacttgatgagctgc
aaggaaggaaaagtagctatttctccatttgtttgtctctctgggaactctgatagtgat
ttgcttcaaccagaaactccagagcatgtcattctgcgcacaattggtatcagtcacgct
caggttcctgtcctgtggtcacagaaaattgatggccaaggaagaagaatgccacttaat
gcttatgcacttgatttctataaacacggttccttgataggactagtccaggataacagg
atgaatgaaggagacgcttaccagctattgaaagatttttcactcaccattcagtctatc
agtgtttccttgcgtgagctatgtgaaaatgaagaagacaatgtggtcttagcatttgaa
caactgagcgaaaccttctcggaaaaacttaagaaagtctaa
DBGET
integrated database retrieval system
