Rousettus aegyptiacus (Egyptian rousette): 107512998
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Entry
107512998 CDS
T06036
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray04611
Platelet activation
ray04820
Cytoskeleton in muscle cells
ray04926
Relaxin signaling pathway
ray04933
AGE-RAGE signaling pathway in diabetic complications
ray04974
Protein digestion and absorption
ray05146
Amoebiasis
ray05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107512998 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
107512998 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
107512998 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
107512998 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
107512998 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
107512998 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
107512998 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ray00536
]
107512998 (COL3A1)
Glycosaminoglycan binding proteins [BR:
ray00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107512998 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
107512998
NCBI-ProteinID:
XP_016004629
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MMSFVQKGIWLLLALLHPTVILAQQLPEVVDGGCSHLGQSYADRDVWKPEPCQICVCDSG
SVLCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGHGPQGPKGDPGPPGIPG
RNGDPGIPGQPGSPGSPGPPGICESCPTGSQNYSPQFESYDVKAGVGGAAAGYPGPAGPP
GPPGPPGASGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAMGPSGPAGKDGESGRPGRT
GERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPM
GPRGTPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSP
GSNGAPGQRGEAGPQGHAGAPGPPGPPGTNGSPGGKGEMGPAGIPGAPGLSGARGPPGPA
GTNGAPGQRGAAGEPGKNGAKGEPGPRGERGEGGAPGIPGPKGEDGKDGSPGEPGASGLP
GAAGERGAPGFRGPAGANGAPGEKGPAGERGGPGPAGPRGAPGEPGRDGAPGGLGPRGAS
GSPGGPGSDGKPGPPGSPGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGPPGKNGERGGP
GGPGPPGPAGKNGENGGQGPPGPTGAPGDRGEAGPTGAPGLPGTAGVSGPPGENGKPGEA
GPKGEAGAPGTPGGKGDAGAPGERGPPGAAGAAGARGLPGPAGPAGGKGPAGPAGPPGPA
GSNGIQGMPGERGGPGGPGPKGDKGDPGGPGTDGVPGKDGPRGPAGPIGPPGPAGQNGEK
GESGSPGPPGVAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGGKGERGPPGERGEGGPP
GAAGAPGGSGPAGPPGPQGAKGERGSPGGPGAAGFPGGRGPPGPPGSNGNPGPPGSSGAP
GKDGPPGPPGSSGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLA
GPPGMPGARGSPGPQGVKGESGKPGPSGQNGERGPPGPQGLPGLAGTAGEPGRDGNPGSD
GLPGRDGTPGTKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSGAPGPA
GVRGPAGPQGPRGDKGETGERGSNGIKGHRGFPGSPGAPGSPGPAGHQGAIGSPGPAGPR
GPVGPSGPAGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGG
GAAALGVAGGEKAGGFAPYYGDEPMDFKINTEEIMTSLKSVNGQIEKIISPDGSRKNPAR
NCRDLKFCHPELKSGEYWVDPNQGCKMDAIKVFCNMETGETCINASPLNVPRKNWWTDSG
TEKKHVWFGETMDGGFQFSYGNPELPEDILDVQLAFLRLLSSRASQNITYHCKNSIAYMD
HDSGNVKKALRLMGSNEGEFKAEGNSKFTYAVLEDGCTKHTGEWGKTVFEYRTRKAVRLP
IIDIAPYDIGGPDQEFGVDIGPVCFL
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaggggatctggttacttcttgctctgcttcatcccactgtt
attttggcacaacagctcccggaagttgttgatggaggatgctcccatctcggtcagtcc
tatgcggatagagatgtctggaagccagaaccatgccaaatatgcgtctgtgactcagga
tctgttctctgcgatgacataatatgtgacgaccaagaattagactgtcccaacccagag
atcccatttggagaatgttgcgcagtttgcccacagcctccaacagctcctactcgccct
cctaatggccacggacctcaaggccccaagggagatccaggccctcctggtattcctggg
agaaatggtgatcctggtattccaggacaaccaggttcccctggttctcctggcccccct
ggaatctgtgaatcgtgccccactggtagtcagaactattctccccagtttgagtcatac
gatgttaaggctggagtaggaggagcagccgcaggatatcccggaccagctggtccccca
ggccctcctggtcctcctggtgcatctggtcatcctggctcccctggttctccaggatac
caaggtccccctggtgaacctgggcaagctggtccttcaggccctccaggacctcctggt
gctatgggtccatctggtcctgctggaaaagatggggaatcaggaagacccggacgaact
ggagaacgaggattgcctggacctcctggtatgaaaggtcccgctggcatgcctggattc
cctggtatgaaaggacacagaggcttcgatggacgaaatggagaaaagggtgaaacaggt
gctcctggattaaagggcgaaaatggtcttccaggtgaaaacggagctcctggacccatg
ggtccaagagggactcctggtgagagaggacggccaggacttccaggagcagcaggggct
cgaggtaatgatggtgctcgaggaagtgacggacaaccaggcccgcctggtcctcctgga
actgcaggattccctggctcccctggtgctaagggtgaagttggacctgcaggatctcct
ggttcaaatggtgcccctggacaaagaggagaagctggacctcagggacatgctggtgct
ccaggtcctcctggccctcctgggactaatggtagtcctggtggtaaaggtgaaatgggt
cctgctggcattcctggagctcccggactgtcaggagcccggggtcctccaggaccagct
ggtaccaatggtgctcctggacagcgaggtgctgcaggtgaacccggtaaaaatggtgcc
aaaggagagccaggaccacgtggtgaacgcggtgaaggtggtgctccaggtattccagga
cctaagggtgaagatggcaaagacggttctcctggagaacctggtgcaagtggacttcca
ggagctgcaggagaaaggggtgcacctggattccgagggcctgctggagcaaatggcgct
ccaggagaaaagggtcctgctggggaacgtggtggtccgggtcccgcagggccgagagga
gctcctggagaacctggccgagatggtgcccctggtggtctaggaccaaggggtgcgtcc
ggaagcccaggaggaccaggcagcgatggaaaaccagggcctcctggaagtccaggagag
agtggtcgtccaggtcctccaggcccatctggtccccgtggtcagcctggtgtcatgggt
ttccctggtcctaaaggaaatgatggtcctcctggaaaaaatggagaacgaggtggccct
ggaggtcctggccctccaggtcctgctggaaagaatggtgaaaatggagggcagggaccc
ccaggacctactggggcacctggtgacagaggtgaagcaggacccacaggtgcaccagga
ttaccaggcacagctggagtcagtggtcctccaggagaaaatggaaaacctggtgaagca
ggtccaaagggtgaggctggtgcacctggaactccaggaggcaagggcgatgctggtgcc
cctggtgaacgtggacctcctggagcagcaggtgccgcaggagctagaggtttacctggg
cccgctggtcctgcaggaggaaagggccctgctggtcctgctgggccccctggtcctgct
ggttctaatggtatacaagggatgcctggagaaagaggaggtcctggaggccccggccca
aagggtgacaagggtgatccaggtggtccaggtactgatggtgtcccaggcaaagatggt
ccaaggggtcctgctggtcccattggtcctcctggcccagctggtcagaatggagaaaag
ggtgaaagcggttcccctggacctccaggtgtagctggtcctcgtggtggccctggtgag
agaggtgaacatgggcctccaggacctgctggtttccctggtgctcctggacagaatggt
gagcctggtggtaaaggagaaagaggccctcctggtgagagaggcgaaggaggccctcct
ggggctgcaggagcccctggcggttctgggcctgctggtccccctggtccccaaggtgcc
aaaggtgaacgtggcagtcctggtggtcctggtgctgctggcttccctggtggccgtggt
cctcctggtcctcctggtagtaatggtaacccaggccctccaggctccagtggtgctcca
ggcaaggatggacccccaggtccacctggtagcagtggtgctcctggcagccctggggtg
tctggaccgaaaggtgatgctggtcaaccaggtgaaaagggatcacctggtgcccaaggc
cctccgggggctccaggtccacttggaattgcagggattaccggagcacggggtctggca
ggacctccaggcatgccaggtgccagaggaagccctggcccacaaggcgttaagggtgaa
agtgggaaaccaggacctagtggtcaaaacggagaacgtggtcctcctggaccccaaggt
cttcctggtctggctggtacagctggtgaacctggacgagatggaaaccctggatcagat
ggtctgccaggccgagatggaactcctggtaccaagggtgatcgtggtgaaaatggctct
cctggtgctcctggtgctcctggtcatccaggcccacctggtcctgtcggtccagctgga
aagagtggtgacagaggagaaactggccctgctggaccttctggtgctccaggtcctgct
ggtgtcagaggtcctgctggtccccaaggcccacgtggtgacaaaggtgaaacaggcgaa
cgtggttctaatggcatcaaaggacatcgaggattccctggtagcccaggtgccccaggt
tctccaggtcctgctggtcaccaaggtgcaatcggtagtccaggccctgcaggacccaga
ggacctgtgggacctagtggacctgctggcaaagatggaacaagtggacatccaggcccc
attggaccaccagggcctcgaggcaacagaggtgaaagaggatctgagggatccccaggc
cacccaggacaaccgggccctcctggacctcctggtgctccaggtccatgctgtggtggt
ggagctgctgccctcggtgttgctggaggtgaaaaagctggtggctttgccccatattat
ggagatgaaccaatggatttcaaaatcaacactgaagaaataatgacttcactcaaatcg
gtcaatggacaaatagaaaagataattagtcctgatggttcacgcaaaaatcctgctcgg
aactgccgagacctgaaattctgccatcctgaactcaagagtggagaatattgggttgat
cctaaccaaggctgcaagatggatgctattaaagtattctgtaatatggaaactggggaa
acatgcataaatgccagtcctttgaatgttcctcgtaagaactggtggacagattctggt
actgagaagaaacatgtttggtttggagaaaccatggatggtggttttcagtttagctat
ggcaatcctgaacttcctgaagatattcttgacgtccagctggcattcctcagacttctc
tccagccgggcttcccagaacatcacgtatcattgcaagaacagcattgcgtacatggat
catgatagtgggaatgtaaagaaagccctgaggctgatgggctcaaatgaaggtgaattc
aaggccgaaggaaatagcaaattcacatatgcagttctggaggatggttgcactaaacac
actggggaatggggcaaaacagtcttcgaataccgaacacgcaaggctgtgagactacct
attatagatatcgcaccctatgatattggtggtcctgatcaagaatttggtgtggacatt
ggccctgtttgctttttataa
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integrated database retrieval system
