Rousettus aegyptiacus (Egyptian rousette): 107513912
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Entry
107513912 CDS
T06036
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107513912 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ray03041
]
107513912 (PRPF40A)
Spliceosome [BR:
ray03041
]
Complex A
U1 snRNP components
U1 related factors
107513912 (PRPF40A)
Complex B
107513912 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
107513912
NCBI-ProteinID:
XP_016006573
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MQATPSEAEAGGESPQSCVSAAHSDWTAGKPVSLLAPLIPPRSAGQPLTFSPSGRQPLRS
LLVGICSGSGRRRSSLSQTMRPGTGAERGGLMVSEMESHPPARGAGDGERRLSGSSLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTASGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGY
QNTIVAGSLITKSNLHAMIKAEESSKQEECTTASTAPVPTTEIPTTMSTMAAAEAAAAVV
AAAAAAAAAAAAANASASTSASNTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQ
LTSTPAVQDQSVEVSSNAGEETSKQETLADFTPKKEEEESQPAKKTYTWNTKEEAKQAFK
ELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYK
EAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKE
QAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICF
EEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTIS
SDIRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFE
DFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQA
TPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKK
SKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSK
KRRHKSDSPESDAEREKDKKEKDRESEKERTRQRSESKHKSPKKKTGKDSGNWDTSGSEL
SEGELEKRRRTLLEQLDDDQ
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagtgaggctgaggctgggggcgaatcgccgcagagctgcgtgtcg
gcagcgcactctgattggacagcggggaagcctgttagcttattggccccgctgatcccg
ccccgtagcgcggggcagcctttaacctttagccccagcgggcgccagccactcagatcg
cttcttgttggtatatgcagcggcagtggccgccggcggagcagtctgagccagacgatg
aggccggggacgggagccgaacgtggaggcctcatggtgagtgaaatggagagccatcct
cccgcgcggggtgctggggacggggagcggagattgtccggctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcaccctggcatg
cattatgccccaatgggaatgcaccctatgggtcagagagcaaatatgcctcctgtacct
catggaatgatgccacaaatgatgcccccaatgggaggaccgccaatgggacaaatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatg
cagcctgccttaccgccaggagtaaataatatggatgtagcagcaggtacagcatctggc
gcaaaatcaatgtggactgaacataaatcacctgatggaaggacttactactacaatact
gaaacaaaacaatctacttgggagaaacctgatgatcttaaaacacctgctgagcaactt
ttatctaaatgcccctggaaggaatacaaatctgactctggaaagccttactattacaat
tctcaaacaaaggaatcccgctgggccaaacctaaagaacttgaagatcttgaaggatac
cagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaa
gctgaagaaagcagtaagcaagaggagtgcaccacagcatcaacagccccagttcctaca
accgaaattccgaccacaatgagcaccatggctgctgcagaagcagcagctgctgtcgtt
gcagcagctgctgctgccgctgccgctgccgctgcagccaatgccagtgcttccacctct
gcttctaatactgtgggtggaactgttccagttgttcctgagcctgaagttacttcaatt
gttgctactgttgtagataatgaaaacacagtaacaatttcaactgaggaacaagcacaa
cttactagtacccctgctgttcaggatcaaagtgttgaagtgtctagtaatgccggagaa
gaaacatctaagcaggaaaccttagctgattttactcccaaaaaagaagaggaggaaagc
caaccagcaaaaaaaacatatacttggaatacaaaggaggaggcaaagcaagcatttaaa
gaattattgaaagaaaagcgggtaccatctaatgcttcatgggagcaagctatgaaaatg
atcattaatgatccacgatacagtgcattagcaaagttgagtgaaaaaaagcaagccttt
aatgcttataaagtccagacagagaaagaagaaaaagaagaagcaagatcaaagtacaaa
gaggctaaggaatcctttcagcgttttcttgaaaatcatgagaaaatgacttccacaacc
agatacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatcagaa
cgtgatcgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaaggag
caagcaaagcaactgcgaaagagaaattgggaagccttaaaaaacatacttgacaacatg
gctaatgtaacatactcaactacttggtctgaagcccagcagtatctgatggataatcca
acttttgcagaagatgaggaattacagaacatggataaagaagatgcattaatttgcttt
gaagaacacattcgggctttagaaaaggaagaagaagaagaaaaacagaagagtttgctg
agagaaaggagacgacagcgtaaaaacagagaatcttttcagatatttttagatgagctg
catgaacatggacaactgcattctatgtcatcttggatggaattgtatccaacgattagt
tctgacattagattcactaatatgcttggtcagccggttttttcattaggatcaactgca
cttgaccttttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaag
ataataaaagacattctaaaggataaaggatttgtagttgaagtaaatacgacttttgaa
gactttgtggcaataatcagttcaactaaaagatcaaccacattagatgctgggaatatt
aagttagcttttaatagtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaa
gaggaggctcggaagatgaaacgaaaagaatctgcttttaagagtatgttgaaacaagct
actcctccaatagaattggatgctgtctgggaagatatccgggagagatttgtaaaagag
ccagcatttgaagacataactctagagtctgaaagaaaacgaatatttaaagattttatg
catgtgctcgagcatgaatgtcagcatcatcattcaaagaacaagaaacattctaaaaaa
tctaaaaaacatcacaggaaacgttcccgttctcgatcggggtcagattcagatgacgat
gacagccattcaaagaaaaaaagacagcgatcagagtctcgttctgcttcagaacattct
tctagtgctgagtctgagagaagttacaagaagtcaaaaaaacataagaaaaaaagcaag
aagaggaggcataaatctgactctccagagtcagatgctgagcgagagaaggataaaaaa
gaaaaagaccgggaaagcgaaaaagagagaactagacaaagatcagaatcaaaacacaaa
tcacctaagaaaaagactggaaaggattctgggaattgggatacttctggcagtgaactg
agtgaaggggaattggaaaagcgcagaaggacccttttggagcaactggatgatgatcaa
taa
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