Rousettus aegyptiacus (Egyptian rousette): 107516341
Help
Entry
107516341 CDS
T06036
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X4
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107516341 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ray03019
]
107516341 (CNOT1)
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107516341 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107516341 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
107516341
NCBI-ProteinID:
XP_016011465
UniProt:
A0A7J8CEY9
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLSSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacaaagccaaattttatctccacgttgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggtcttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccaatttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagccatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gagcagatagacgcttttcttaagacgctgcgcagagattttccccaggaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgattttatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcaattt
ggtgttcgggaggtcacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggaattccattacagagtatctctgctcctggcagtggcatc
tggagtgatggaaaagataaaagtgatggagcacaggcacacacgtggaatgtagaagtc
ttgattgatgttctcaaagaactgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcaaaggggtctgggtatggaagtgttcccggtagacctcatatatagaccttggaaa
catgcagaaggccagctctccttcattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgccactgatattttgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctactgaggctc
gcagaggtggggcaatatgagcaagtcaaacagctcttcagctttcctatcaaacactgt
ccagatatgttggtattggccttactacaaatcaacacctcctggcacaccttgcgccat
gaactcatctccactctgatgccaattttcctcggaaaccatcctaactctgctattatt
ttgcactatgcatggcatgggcagggacagtctccctcaatccgccaacttatcatgcat
gcaatggcagagtggtacatgcgaggggagcagtatgatcaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
ttcgttattgaccttgctgcacttgcttcacgtcgcgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggagagccttttatccaggcatgcatgactttttta
aagagacggtgcccttctattttgggtggacttgcccctgagaaagatcagcccaaaagt
gctcaacttcctccagaaactctggcaacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggagttatcagaaacaatcctcaccatggtagccaattgcagtaatgtt
atgaataaggccagacaaccgccacctggagttatgccaaaaggacgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctctagctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttccaccaaatttg
agttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttccacccca
aatcaaacaactgcattcagtggtattggaggactttcatcacagctcccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggctcttggactccctgcagtgaat
aacgatccttttgtacagaggaaactgggcacctctggactcaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaaccagcacttt
agtaaagagatagacgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagaggtttaaagactctacc
ataaagagggaacgagaagtatttaattgtatgctaaggaacttgtttgaagaatatcgg
ttttttccccaataccctgataaagagttacatataacagcctgcctgtttggtgggata
attgaaaaaggactggtaacttacatggcactaggtctggccctgcgctatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattatttcgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatatcgagtatggacagcaatctagagat
cctcctgtgaaaatgcagggctccatcacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagcaccccttgctggtcaggttagcactatggta
accacctcaacaaccaccactgttgctaaaacggttacagtcaccaggccaactggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacattgcttgtg
gccacagatcaaactgaaagaatcgtagagcctccagaaaatatccaagagaaaattgca
tttatcttcaacaatctctcacaatcgaatatgacacaaaaggttgaagaactcaaggaa
actgtgaaggaagagtttatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaactttcacagcctgtattcaaacttccttgacactctgaagaatcctgaa
tttaataagatggttctaaatgagacctacagaaacatcaaagttctcctgacctctgat
aaagctgccgccaatttctcagatcgttctttgctgaagaacttgggacattggctgggg
atgattacactagctaaaaataaacccatcttacatactgacttggatgtaaaatctttg
ctgctagaggcttacgttaaaggacaacaagaattgctctatgtagtgccctttgttgcc
aaagtcttagagtctagcattcgtagtgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagctgagctacatcaggaacatgacttaaagttaaacttgaag
tttgagattgaggttctctgcaagaatcttgcattagacatcaatgagctaaaacctgga
aacctcctaaaagataaagatcgcctaaagaatttagatgagcaactctctgctccaaag
aaagatgtcaaacagccagaagaactccctcccatcacaaccacaacaacttctacgaca
ccagctaccagtaccacctgtacagccacagttccaccacagccacagtacagctaccat
gacatcaatgtctattcccttgcaggcctggcaccacacattactctaaacccaacaatt
cccttgtttcaggcccatccacagttgaagcagtgtgtgcgtcaagcgattgaacgagct
gtccaggagttggtccatcctgtggtggatcgatcaattaagattgccatgactacttgt
gagcaaatagtcaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttaacagctggcatggctatgattacttgcagggaacct
ttgctcatgagcatatctactaatctgaaaaacagttttgcctcagctcttcgtactgca
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcctgctgttttattcagaagaccgcagtagaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaagggcgcaggtac
tgtgatcctgttgtgttaacataccaagctgagcggatgccagagcaaatcagattaaaa
gttggtggtgtggacccaaagcagctggctgtttatgaagaatttgcgcgcaatgtgcct
ggcttcttgcctaccaatgatttaagtcagcccacgggatttttagctcagcctatgaag
caagcttgggcaacggatgacgtagctcaaatttatgataagtgcattacagaactggag
cagcacctacatgccatcccaccaacattggccatgaaccctcaagctcaggctctgaga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ttgctccagaaggctgtagagggcttactagatgccacaagtggtgctgatgctgatctg
ctgctgcgctacagggaatgccacctcttggtcttaaaagctcttcaagatggccgggca
tatgggtctccgtggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggcagtggagttgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcaatggagaatggtttaaactacatggctgtggca
tttgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgcccatattact
gaggcagatctgttccacaccattgaaaccctcatgagaattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtatgatgatcctccaggcctgagggagaaagcagagtaccttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacagatgcaccagcaaggaatcctgaagactgatgacctcataacaaggttctttcgt
ctgtgtactgaaatgtgtgttgaaatcagttaccgtgctcaggcagagcagcagcacaat
cctgctgctaatcctaccatgattcgagccaagtgctatcacaacctggatgcctttgtc
cgactcattgcactgctagtgaagcactcaggggaggccaccaacactgtcacaaagatc
aatctgctgaacaaggtccttggtatagtagtgggagttctcctacaggatcatgatgtt
cggcaaagtgaatttcagcagcttccctaccatcgaatatttatcatgctgcttttggaa
ctcaatgcacctgagcatgtactagaaaccattaatttccagacacttacagctttctgc
aatacattccacatcttgaggcccaccaaagctccaggctttgtgtatgcctggctcgaa
ctgatctcccatcggatatttattgcaagaatgctggcacatacgccacagcagaaggga
tggcctatgtatgcacagctactgattgatttattcaaatatttagcacctttccttaga
aatgtggaactcaccaaacctatgcaaatcctctacaagggcactttaagagtgctgctg
gttcttttgcatgatttccctgagttcctttgtgattaccattatggattctgcgatgtg
atcccacctaattgtattcagctaagaaatctgatactgagtgccttcccgagaaacatg
aggctcccagacccatttactcccaatctgaaggtggatatgttgagtgaaattaacatt
gcaccccggattctcaccaatttcactggagtgatgccacctcagttcaaaaaggatttg
gattcctatcttaaaactcgatcaccggtcacttttctatctgatcttcgcagcaaccta
caggtgtccaatgagcctggcaatcgctacaacctccagctcatcaatgcactggtgctc
tatgtagggactcaggccattgcacacatccacaacaagggcagcacaccttcaatgagc
acgatcacccactcggctcacatggacatattccagaatctggctgtggacttggacact
gaaggccggtatctctttttgaatgcaattgcaaatcagctgcggtacccaaatagtcac
actcactacttcagctgcaccatgctgtatctctttgcagaggccaacactgaagctatc
caagaacagatcacaagggttctcttggaacggttgattgtaaataggccacatccttgg
ggtcttcttattaccttcattgagctgattaaaaatccagcatttaagttctggaaccac
gagtttgtacactgtgccccagaaattgaaaagttattccagtcggttgcacagtgctgc
atgggacagaagcaggctcaacaagtaatggaagggactggtgccagttag
DBGET
integrated database retrieval system
