Rousettus aegyptiacus (Egyptian rousette): 107516509
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Entry
107516509 CDS
T06036
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ray03021
]
107516509 (SCAF8)
03041 Spliceosome [BR:
ray03041
]
107516509 (SCAF8)
Transcription machinery [BR:
ray03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107516509 (SCAF8)
Spliceosome [BR:
ray03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107516509 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107516509
NCBI-ProteinID:
XP_036078893
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPAVTPVLASATAAMSNTPG
TPVTPVTPANVVQGLPDPWVSQIANTDTLTAVAQILQSPQGQQFQQLIQTLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAASTLTPLEQGVPFNKKLMDRFDFGEDSEHSEEP
KKEIPTSQLSHVSESVNSSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNTEWETVKSSEPVKETAPTTQSPAPVDKETVVTTQAEAFPPPVA
MLQIPVAPAVPAVSLVPPAFPVSMPVPPPGFSPMPPPFLRASFNPSQPPPGFMPPPVPPP
VVPPPAIPPVVPSLVQPPLSMTPETVKDVGFGGLVLPGGSVAGSLAASALPAGNVFNPPT
KQAEPEEKVPHLIDHQISSGENTRSVIPNDISSSSAILGGQPPNVTSNSGILGVQRPNVS
SSSEILGVRPSNVSGSSGIIGAQPPNILNNSAILGIQPPGVSSSSGLLGVLPPNVPSSPG
LIGVQPPNVPNASGLLAAQPPAGPQNLPPLGLSGQRLPIVPVLDLRPGLIPQAPGPRFPL
LQPGLPPQRGIPPPSVLDAALHPPPRGPFPPGDIFSQPERPFLVPGRQSIDNITNPEKRI
PLGNDNIQQEGDRDYRFPPIETRESMSRPPPVDVRDMVGRPVDPREGPGRPPLDGRDHFG
RPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGPRDFDEREHRVLPVFAGPKGLHEERGR
FRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGRDR
IQNTWVPPPHARVFDFFEGATSQRKGDSVPQVNGENTERHAQPPPLPVQNDPELYEKLTS
SSEINKEKSDTVADIESEPVVESTETEGT
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaagaccttcaatagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaatgactacaaacca
ccgatttctaaagcgaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagtgttgaaaaattcattcagaaatgtaaaccagaatacaag
gtacccggactttatgttattgactccattgtacgacaatctcgacatcagtttggtcaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgataagagtaaaatagtgagagtgttaaacttatggcagaag
aataatgtatttaagagtgagattatccagcctcttctggacatggcggcggggatcccc
ccgccggcggtcacgcccgtgctggccagcgccacggccgccatgagcaacaccccagga
actcctgtgacacccgttactccagccaatgtggtacaaggtttacctgacccgtgggta
tctcagatagcaaacacggatacgcttacggctgtagcgcagatcttgcaaagtcctcaa
ggccagcagtttcagcagctaatacagactttacagatccagcagcagaagccccagcct
tccattctgcaggccctggacgctggcctcgtggttcagttgcaggctctcacggcccag
ctgacggcggcggcggcggcggccagcaccctcactcccttagaacagggagtgcccttt
aacaagaagttgatggataggtttgattttggggaagattctgagcatagtgaagaaccc
aaaaaggaaattccaacttctcaactttctcatgtttcagaatctgtgaacagttccata
tttcatcagatagcagaacagctacagcaacaaaacctcgaacatctccgacagcaactc
ctggaacagcagcagcctcaaaaggcaacccctcaggatagtcaagaagggacattcgga
tcagagcattcggcgtcaccatcacaagggagcagtcaacagcattttcttgaacctgaa
gcaaatttggatgattccatagatattcagcaacaggacatggatatagatgaagggcaa
gatggagtggaagaggaaatcttcgaacaagaagcaaagaaagtggccgttcgctctaga
tcaagaacacattcacgatctcgttcaagatcaccaagaaaacgaaggtccaggtcacga
tctggttctcggaagcgtaagcacagaaagcggtcgcgctcgcgctcgcgggaaaggaag
aggaagtcgtcccgctcgtactccagcgagaggagagctcgggaaagggagaaggagcgg
cagaagaaggggctgccccccatccggtccaagacgctgagcgtatgtagcacgactctc
tgggttggtcaggtggacaagaaggcgacgcagcaggatttaaccaacctctttgaagag
tttggacagatcgaatccattaatatgattcctcccaggggctgtgcttatgtctgcatg
gttcatcgacaggacgcatttcgggctctgcagaaacttagttctggatcatataaaatc
gggtccaaggtcattaagattgcttgggctttaaataaaggtgtaaaaacagaatacaaa
caattctgggatgtggatcttggagttacatatataccatgggaaaaagttaaagtggat
gacttggaaggttttgcagaaggaggcatgattgatcaagaaactgtaaatactgagtgg
gaaactgtgaaaagttcagagcctgttaaagagacggccccgacaactcagagcccagct
cccgttgacaaggagacagtggttacaacccaggcagaggcttttcctccacccgttgct
atgttacagatccccgtagccccagccgtgcctgcggtcagcctagtgccacccgcgttc
cctgtgtccatgccggtcccgcctcctggcttcagtccgatgccgccgcctttcctacga
gcaagtttcaacccttcacaaccaccgcctggtttcatgccacccccagtcccgccgcct
gtcgtgcctccacctgctattccgccagtcgtgccatcgttagtacaaccgccgttatcc
atgactccagaaactgtgaaagacgttggatttggtggcctcgttttaccagggggttct
gttgccggcagccttgcagcttccgctctgccagctggaaatgtttttaatcctccaacc
aaacaagcagagcctgaagaaaaagtacctcatcttatcgaccaccagatttcttctggg
gaaaacaccagatcagtgattccaaacgatatttcaagtagctctgcaattttaggagga
cagccgcccaatgtgacgagcaattctggaattctgggagttcaaagaccaaatgtatcg
agcagttctgagattcttggagtccggccatctaatgtttccggtagttctggaattatt
ggagcccagccgccaaatattctcaataactctgcaattttgggaatacagccaccaggt
gtttcgagcagttctggacttttgggagtgctgcccccaaacgtccccagcagtcctgga
cttataggagtacagccaccaaacgttccgaatgcatctggacttttggcagcccagccg
ccagccgggcctcagaacttaccccctctcggtctctctggtcaaaggctgcccattgtg
ccagtgttagaccttcgtccaggactaataccgcaggcaccggggccgcgatttcccctg
ctgcagcccggacttccgccccagcgagggatccctcccccgtcggtgcttgacgcagct
cttcacccaccaccccgcgggccttttcctccaggagatatttttagtcagccagaaaga
cctttcctagttcctggaaggcaaagtatagacaatatcactaatccagaaaaaaggata
ccactcgggaacgataacattcaacaggaaggagacagagattaccggtttcctcccata
gaaaccagggagagcatgagcaggcctcccccggtcgacgttagggacatggttggacgg
cccgtagacccaagggaaggtccggggaggcctccgttagatggtagggatcattttgga
agaccgcctgtagatatcagagagaatctcgtgaggccaggtatagatcaccttggtcgc
agagaccactttggctttaatccagagaagccctgggggcctagagatttcgatgagcga
gagcatcgggttctgcctgtcttcgctggtccaaaaggccttcatgaagaaagaggcaga
tttcggtctggaaactatcggtttgatcctagaagtggtccttggaacagaggatttgga
caagaagttcacagagattttgatgaccgcagaagaccctgggagaggcagagggatagg
gatgacagagattttgatttctgcagagaaattaatggaaatcgtcttggacgagataga
attcaaaacacctgggtcccccctcctcatgctcgggtttttgatttttttgaaggggcc
acttctcaacgaaaaggtgacagtgtgcctcaggttaatggtgaaaacactgagagacat
gctcaaccaccgcccttaccagtacagaatgaccctgaactttatgagaaactgacatct
tcaagtgaaataaacaaggagaagagtgacacagttgctgatatagaaagtgaaccagtg
gtagaaagcacagaaactgaggggacataa
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