Rousettus aegyptiacus (Egyptian rousette): 107517979
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Entry
107517979 CDS
T06036
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray05016
Huntington disease
ray05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
107517979 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
107517979 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ray03019
]
107517979 (HTT)
04131 Membrane trafficking [BR:
ray04131
]
107517979 (HTT)
03029 Mitochondrial biogenesis [BR:
ray03029
]
107517979 (HTT)
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107517979 (HTT)
Membrane trafficking [BR:
ray04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107517979 (HTT)
Mitochondrial biogenesis [BR:
ray03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
107517979 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
TOR1L1_N
TPR_IPO5
Motif
Other DBs
NCBI-GeneID:
107517979
NCBI-ProteinID:
XP_016014684
LinkDB
All DBs
Position
Unknown
AA seq
3125 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQPSPPQPPQPPPPPQAQPPPPQPQPPPPPPPPGPAVAEE
PLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDAESDV
RMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKCR
PYLVNLLPCLTRTSKRPEESVQETLAAAIPKIMASFGNFANDNEIKVLLKAFVANLKSSS
PTVRRTAAGCAVSVCQHSRRTQYFYSWLLNALAGLLVPVEDEHPTLLILGVLLTLRYLVP
LLQQQVKDTSLKGSFGVTQKEMEVSPSTEQLVQVYELTLRYTQHQDHNVVTGALELLQQL
FRTPPPELLQALTTVGGLAQLPAARDQPGGRGRSGSIVELIAGEGSSCSPVLSRKQKGKV
LFGEAAALEDDSESRSEASSPAFTASAKGEIGGELAASSGVSTPGSASSAADSTGHDIIT
EQPRSQHTLQPDSVDLTGCDLTSTATDGDEEDILSHSSSQVSAVPSDPAMDLNDGTQASS
PISDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYPGMQLGPAQEDGDEEPTGILPGEDAD
AFRNTAIALQQAHLLKSMGHSRQPSDSSVDKFVSRDEAAEPGDQENKPCRIKGDIGQSTD
DDAAPLVHCVRLLSASFLLTGEKNALVPDRDVRVSVKALALSCVGAAVALHPESFFSKLY
KVPLDTTEYPDEQYISDVLNYIAHGDPQVRGATAILCGTLVCSILSRSRFRVGDWMGAVR
TLTGSTFSLADCIPLLQRTLKDESSVTCKLACTAVRHCITSLCNSSYSDLGLQLLTDVLS
LQSSSYWLVRTELLETLAEVDFRLVSFLEAKADHLHRGAHHYTGLLKLQERVLSSVVLHL
LGDEDPRVRHVAAASLVRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHETQPPSHF
SVSTITRIYRGYNLLPSITDVTLENNLSRVVAAVSHELITSTTRALTFGCCEALCLLSTA
FPVCIWSLGWHCGVPPLSASDESRKSCTVGMASVILALLSSAWFPLDLSAHQDALILAGN
LLAASAPKSLRSPWTSEEEASPAATKQEEVWPALGDRSLVPMVEQLFSHLLKVVNICAHV
LDDVAPGPAVKAALPSLTNPPSLSPIRRKGKEKEPAEQASAPLSPKKSSEASPASRQSDT
TGPVTANKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSSEKFGGFLRSALDVLA
QILELATLQDIGKCVEEILGYLKSCFNREPMMATVCVQQLLKTLFGTNLASQFDGLSSNP
SKCQGRAQRLGSSSVRPGLYHHCFMAPYTHFTQALADASLRNMVQAEQDHDTSGWFDVLQ
KVSTQLKTNLTSVAKNRADKNAIHSHIRLFEPLVIKALKQYTTTTSVQLQKQVLDLLAQL
VQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQII
GIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSML
LRLIQYHQVLEMFILVLQQCHKENEDKWRRLSRQIADVILPMLAKQQMHIDSHEALGVLN
TLFEILAPSSLRPVDMLLRSMFVTPDTMASVSTVQLWISGILAILRVLISQSTEEIVLSR
VQELSFSPYLLSCPAINKLRDGESGSGPEELSEGRQAKSLPEETFSRFLLQLVGILLEDI
VTKQLRVEVSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLLTADGADGSFYSL
ESLNARVRSMAPTHPALVLLWCQILLLVSHTDYRWWAEVQQTPKRRSLSSRKSLSPPASG
EEEDSAPAPRPGVCNREIVRRGALILFCDYVCQNLHDSEHLTWLVVNHIQDLVALSHEPP
VQDFISAVHRNSAASGLFIQAIQSRCEDLSPPTTLKKTLQCLEGIHLSQSGAVLTLYVDK
LLRTPFRALARMVDTLACRRVEMLLAANLQSSMAQLPVEELNRIQEYLQSSGLAQRHQRL
YSLLDRLRLATAPGSPGPSPPVTSHPLDGDGSLAVETVSPDKDWYVRLVRSQCWTRSDSA
LLEGAELVDRLPPEDMGAFMTNPEFNVSLLAPCLGLGMREISGGQKSPLFEAARVATLDR
VTSVVQQLPAVHQVLQPFLPAEPTTYWSKLSDLFGDAAWYCKLTTLARALAQYLLVFPKL
PGHLRLPPEKERDTVKFVVTTLEALSWRVIHERVPLSLDLQAGLDCCCLALQLPGLWSAL
SSPEMVTHACSLIHCVRFILEAIVVQPGDQLLSPERRTDTPKAAREDGVDSPTQSPEYVT
AACGMVAEMVESLPSVLSLGHRRNSSMPAFLTAALRNIVVSLARLPLVNSYTRVPPLVWK
LGWSPKPGGDFGTVFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETWATLLGVLVT
QPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRSKPLK
ALDTRFGRKLSMIRGIVEQEIQAMVSKRENIATHHLYQAWDPVPSLSPATTGALIDHDKL
LLQINPERELGDMSYKLGQVSIHSVWLGNSITPLREEEWDEEEEEEADVPTPVSPPTSPV
SSRKHRAGVDIHSCSQFLLELYSRWVLPSSSARRTPVILISEVVRSLLVVSDLFTERNQF
EMMYMTLTELRRVHPPEDEILLQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLRSSHLP
SKIGALHGVLYVLECDLLDDTAKQLIPAVSDYLLSNLRGIAHCVNSHSQQHVLVMCATAF
YLIENYPLDAGPEFSAAIVQMCGVMLSGSEESTPSVVYHCVLRGLERLLLSEQLSRLDAE
SLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKVSPGRTSTPSPAAPDSESVIVAMER
VSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVY
KVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMAVWSLSCFFVSASTGPWVSAILPHVI
SRMGKLDQVDVHLFCLVATDFYRHQMEGELDRRAFQSVFEVVAAPGNPYHRLLACLRSVH
KVATC
NT seq
9378 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggaaaagctgatgaaggccttcgagtctctcaagtcctttcagcagcag
cagcagccgtcgccgcctcagccccctcagccgccgccgccgccgcaggctcagccgccg
ccacctcagcctcagccgccgccgcccccgccgccgcccggcccggccgtggccgaggag
ccgctgcaccgaccaaagaaagaactctcagctaccaagaaagaccgtgtgaatcattgt
ctgaccatatgtgaaaacatagtggctcagtctctcagaaattctccagaatttcagaaa
cttctgggcattgctatggaactttttctgctgtgcagtgatgacgcagagtcggatgtc
aggatggtggctgacgaatgcctcaacaaagtcataaaagctttgatggactctaatctt
ccgaggttacagttagaactctataaggaaattaaaaagaacggtgccccccggagcctg
cgcgctgccctctggaggtttgccgagctggctcacctggtccggcctcagaaatgcagg
ccttacttggtgaaccttttgccttgtctgactcgaaccagcaagagaccggaggagtct
gttcaggagaccttggctgcagctatacccaaaattatggcttcttttggcaattttgca
aatgacaatgaaattaaggtcctgttaaaggcgttcgtagccaacctgaagtccagctcc
ccgacggtgcggcggacggcggctggctgcgccgtgagcgtctgccagcactcccgcagg
acgcagtatttctacagctggctcctgaacgcgctcgcaggtttgctggtccctgtggag
gacgaacaccccaccctcctgattcttggggtgctgctcacattgcggtacctcgtgccc
ttgctgcagcagcaggtcaaggacacgagcctgaaaggcagctttggagtgacacagaaa
gaaatggaagtctctccctcgacagagcagctggtgcaggtctacgagctgacgctgcgg
tacacgcagcaccaggaccacaacgtggtgaccggggccttggagctcctgcagcagctc
ttccggacgccacccccggagctcctgcaggcgctgaccacagtcggcggcctggcacag
ctccccgccgccagagaccagcccgggggccgcggccgcagcgggagcatcgtggaactt
atagccggagagggttcttcatgcagccctgtcctttcaagaaaacaaaaagggaaagtg
ctcttcggagaagcagccgccttggaggatgactccgagtcgaggtcggaggccagcagc
ccagccttcacagcctcagccaagggtgagattggtggcgaactggctgcctcctccggg
gtgtccactcctggctctgccagctcagccgccgactccacgggtcacgacatcatcact
gagcagccccggtcacagcacacattgcagccggattcggtggatctgaccggctgtgac
ttgacgagcactgccaccgatggggacgaggaggacatcttgagccacagctccagccag
gtcagtgctgtcccgtccgaccctgccatggacctgaacgatgggacccaggcctcctca
cccatcagcgacagctcccagaccaccaccgaaggaccagattcagctgtgaccccttcg
gacagttctgaaattgtgttagatggcgctgacagccagtatccagggatgcagcttgga
cccgcgcaggaggacggtgacgaggaacccacgggaatccttcccggggaagacgcagac
gctttcagaaacactgccatcgcccttcaacaagcacatctattgaaaagcatgggccac
agcaggcagccctccgatagcagtgtagataaatttgtgtcgagagatgaagccgctgag
ccaggagatcaggaaaacaagccttgccggatcaagggtgacataggacagtcaaccgac
gacgatgccgctccccttgtccattgtgtccgccttttatctgcttcatttttgctaact
ggggaaaaaaatgcgctggttccggacagggacgtgagggtcagcgtgaaggcgctggcg
ctcagctgtgttggagccgcggtggcccttcatcccgagtcgttcttcagcaaactttac
aaagtacctcttgacaccacggaataccctgatgagcagtacatctcggatgtcctgaac
tacatcgctcacggagacccccaggtccgcggggccacggccatcctgtgtgggaccctc
gtctgctccattctcagcaggtctcgcttccgagtgggggactggatgggcgctgtcagg
acgctgacaggaagtacattttccctggcggactgcattcctttgctgcagagaactttg
aaggatgagtcttccgttacttgcaagttagcttgtactgctgtgcggcactgcatcacg
agcctctgcaacagcagctacagcgacctgggcctgcagctgctcaccgacgtgctgagc
ctgcagagcagctcgtactggctggtgaggacggagctgctggagacgctcgcagaggtt
gacttcaggttggtgagcttcttggaggcaaaagcagaccaccttcaccgaggggcacat
cattacacggggctgctgaaactgcaggagcgggtgctcagcagcgtcgtcctccacctg
ctcggggacgaagacccccgcgtgcgccacgtcgcagccgcttcgctcgtgaggcttgtc
ccaaaactcttttacaaatgtgaccaaggtcaagctgatccggtagtggctgtggcaaga
gatcaaagcagcgtttacctgaaactcctcatgcatgagacgcagccgccctcccacttc
tctgtcagcaccataaccagaatatacagaggctataatttactgccgagcataacggat
gtcaccctggaaaataacctctcaagagtcgtcgcggcggtgtcccacgagctcatcaca
tcgaccacgcgggcgctcacctttggatgctgtgaagcattgtgtcttctttcaactgcc
tttcctgtttgcatttggagtttaggttggcattgtggagtgcccccgctgagcgcctca
gatgagtctaggaagagctgcactgtgggcatggcctcggtgatcctcgccctactctcg
tcagcgtggttcccgttagacctctcggcccatcaagatgctttgatcttagccggaaac
ttgcttgcagccagtgcccccaagtctctgagaagcccatggacctctgaagaggaggcc
agcccagcagccaccaagcaggaggaggtgtggcccgctctgggtgaccggagcctggtg
cccatggtggagcagctcttctcccacctgctcaaggtggttaacatctgcgcacacgtc
ctggatgacgtggctcccgggccggcagtgaaggcagccctgccatctctaacgaacccg
ccgtctctgagtccgatccgacggaaggggaaggagaaggagccggcagagcaggcctct
gcgccgctgagccccaagaagagcagcgaagccagcccagcctctcgacagtctgacacc
acagggccagttacagccaacaaatcctcatctctgggaagtttctaccaccttccttcc
tacctcaaattgcacgatgtcctaaaggccacccacgccaactataaggtcaccttggat
cttcaaaacagctctgagaagttcgggggatttctgcgctctgccctggacgttctcgct
cagatcctggagttggccactctgcaggacatcgggaagtgcgttgaggagatcctgggg
tacctgaagtcctgcttcaatcgagaaccgatgatggcaactgtttgtgttcagcagctg
ttgaagactctctttgggacaaacttggcctcccagtttgatggcttatcttctaacccc
agcaagtgccaaggccgcgcacagcgcctcggctcctccagcgtgcggccgggcctgtac
caccactgcttcatggctccgtacacccacttcacgcaggccctggcggacgccagcctg
aggaacatggtgcaggcggagcaggaccacgacacctcggggtggtttgacgtactccag
aaggtgtccacccagctgaagacaaacctcacgagcgtcgcgaagaaccgtgcggataag
aatgctattcacagtcacattcgcttgttcgagcctctggtcataaaggcgctgaagcag
tacacgaccacgacttctgtgcagctccagaagcaggttctggatctgctggcacagctg
gttcagctgcgcgttaattactgtcttctggattcagaccaggtgtttattgggtttgtg
ctgaagcagttcgaatacattgaagtgggccagttcagggaatcagaggcaattattcca
aacatctttttcttcctggtattactgtcttatgaacgctatcattcaaaacagatcatc
ggaattcctaaaatcattcagctctgtgatggcatcatggccagtgggaggaaggctgtg
acacatgccattccggctctgcagcccatagtccatgacctttttgtgttaagaggaacc
aataaagccgacgcaggaaaagaactggaaacccagaaggaggtggtggtgtcgatgttg
ctgaggctcatccagtaccatcaggtgctcgagatgttcattctggtgctgcagcagtgc
cacaaggagaacgaagacaagtggaggcggctctcccggcagatagccgacgtcatcctc
ccgatgctggccaagcagcagatgcacatcgattctcacgaagccctcggagtgttgaat
actttgtttgagatcctggccccttcctccctccggcccgtggacatgcttttacggagt
atgttcgtcactccagatacaatggcgtccgtgagcaccgttcagctctggatctcggga
atcctggccattctgagggttctgatttcccagtcgaccgaagagatcgttctttctcgg
gtccaggagctctccttctcgccatacttactctcctgtccagcaattaataagttaaga
gacggggagagtggttcaggcccggaggagctcagcgaaggcaggcaggcgaagagtttg
ccagaggaaactttttcaaggtttctcctgcagctggtcggcattctcttggaggacatt
gtcacaaagcagctgagagtggaagtgagtgagcagcagcacaccttctactgccaggag
ctgggcacgctgctcatgtgcctcatccacatcttcaagtccggaatgttccggagaatc
acagcggccgcctctagactcctcaccgctgacggcgccgacggcagtttctacagcctg
gagagcttgaacgcgcgcgtgcgctccatggcccccacacacccggccctcgtgctgctc
tggtgccagatcctgctgctcgtcagccacaccgactaccgctggtgggccgaggtgcag
cagacccccaaaagacgcagcctgtccagcaggaagtcgctcagccctcctgcgtctgga
gaggaggaggactccgccccagcgcccagacccggagtgtgcaacagagagatcgttcgg
cggggcgccctcatcctcttctgcgattacgtctgtcagaacctgcacgactcggagcac
ctgacgtggctcgtcgtgaaccacattcaggacctggtcgccctgtcgcacgagcctcct
gtgcaggacttcatcagcgccgtccaccgcaactccgccgccagcggcctcttcatccag
gccatccagtctcgctgcgaagacctgtcaccccccaccaccctgaagaaaacgcttcag
tgcctggaagggatccacctcagccagtcgggcgccgtgctaacgctgtacgtggacaag
cttttgcgtactccgttccgcgcgctggctcgcatggttgacacccttgcttgtcgccgg
gtagaaatgcttttggctgcaaatttacagagcagcatggcccagctgcccgtggaagag
ctcaacagaatccaggagtaccttcagagcagcggcctggcccagagacaccagaggctc
tattcgctgctggacaggcttcgtcttgccactgcaccagggtctcctggcccttctcct
ccggtcacgtcccacccactggatggggacggctccttggccgtggagacagtgagtccg
gacaaagactggtacgtccgcctcgtcagatcccagtgctggaccaggtcagactccgcg
ctgctggagggggcggagctggtggatcggctccccccggaggacatgggcgcattcatg
acgaacccggagttcaacgtgagcctgttggccccgtgcctgggtctgggcatgcgggaa
atttccggaggccagaagagtcccctcttcgaagccgctcgtgtggcgactctagaccgt
gtgaccagcgtggttcagcagctgcctgctgtccatcaagtgctccagcccttcctgcct
gcggagcccaccacctactggagcaagttgagcgatctgttcggtgatgctgcgtggtac
tgcaagctgaccacactggcccgggccctggcccagtacctgctggtgttccccaagctg
cccggccacctgcgccttcctcctgagaaggagagggacactgtgaagttcgtggtcacg
accctcgaggcgctgtcgtggcgtgtgatccacgagcgcgtcccgctgagtctggacctc
caggccggcctcgactgctgctgcctggccctgcagctgcccggcctctggagcgcgctg
tcctccccggagatggtgacccacgcctgctccctcatccactgcgtccgcttcatcctg
gaagccatcgtggtgcaacctggggaccagctgctcagtccagaaagacggacagacacc
ccgaaggcggccagagaggacggggtggactcgcccacccaaagtcccgagtatgttaca
gcggcctgtgggatggtggcggagatggtggagtccctgccgtccgtgctgtccttgggc
cacaggaggaacagcagcatgcccgccttcctcacggcggcgctcaggaacatcgtggtc
agcctggcccgcttacccctcgtcaacagctacacgcgggtccccccgctggtctggaag
ctcggatggtcacccaagccaggaggggacttcggcacggtgttccctgagatccccgtg
gagttccttcaggaaaaggaagtcttcaaggagttcatctaccgcatcaacacgctaggg
tggaccagccgtacccagtttgaggaaacgtgggccaccctcctcggtgtcctggtgact
cagcccctcgtgatggagcaggaggagagcccaccggaagaagacacggagaggacccag
atcaatgtcctggctgtgcaggccatcacctcgctggtgctgagtgcgatgaccgtgccc
gtggccggcaacccagccgtgagctgcttggagcagcagccccgaagcaagcctctgaag
gcgctcgacaccaggttcggcagaaagttgagcatgatcagaggaatcgtagagcaggaa
attcaagcaatggtttccaagagggagaacatcgccacccatcatttataccaagcgtgg
gaccctgtcccctctctgtctccggctactacaggtgccctcatcgatcacgacaagctc
ctgctgcagatcaaccccgagcgggagctgggcgacatgagctacaagctcggccaggtg
tccatccactcggtgtggctggggaacagcatcacacccctgagagaggaggagtgggac
gaggaggaggaggaggaggccgacgtccccacaccggtgtcaccacccacgtcccccgtc
agctccaggaagcaccgggccggcgttgacatccactcctgttcgcagttcctgcttgag
ctgtacagtcgctgggtcctgccgtcgagctcggctcggaggacccccgtcatcctgatc
agcgaagtggttcggtctcttctcgtggtctcagacttgttcaccgaacgcaaccagttt
gagatgatgtacatgaccctgaccgagctgcggagggtgcaccctccagaggatgagatt
ctccttcagtacctggtgcctgccacctgcaaggcggccgccgtcctcggaatggacaag
gccgtggccgagccggtgagccggctcctggagagcacgctgaggagcagccacctgccc
agcaagattggggccctgcacggcgtcctctacgtgctggagtgcgacctcctggacgac
accgcgaagcagctcatcccggccgtcagcgactacctcctgtccaacctcagaggcatc
gcccactgcgtgaactctcacagccagcagcacgtgctggtgatgtgcgccaccgctttc
tacctgatcgagaactaccctctggacgccgggcccgagttctctgcggcgatagtgcag
atgtgtggggtgatgctgtctgggagcgaggagtccaccccatccgtcgtttaccactgc
gtcctgaggggcctggagcgcctcctgctctccgagcagctctcccggctggacgcagag
tcgctggtcaagctgagtgtggacagagtgaacgtgcacagcccgcaccgggccatggcg
gccctgggcctgatgctcacctgcatgtacacagggaaggagaaagtcagcccaggcaga
acgtccacccctagccccgccgcccccgacagtgagtccgtgatcgtggccatggagcgc
gtgtccgtcctcttcgacaggatcaggaagggctttccctgcgaagccagagtggtggcg
cgcatcctgccgcagtttctagacgacttcttcccgccccaggacgtcatgaacaaggtc
attggggagttcctgtcgaaccagcagccctacccacagttcatggccaccgtggtgtac
aaggttttccagactctgcacagcacggggcagtcgtccatggtccgggactgggtcatg
ctgtccctgtccaacttcacgcagaggacgccggtcgccatggccgtgtggagcctgtcc
tgcttcttcgtcagcgcgtccacgggcccgtgggtctcggcgatccttccccacgtcatc
agccggatgggcaagctagatcaggtggacgtccacctgttctgcctggtggccacggac
ttctacagacaccagatggaaggcgaactggaccgccgggcctttcagtccgtgttcgag
gtggtcgcggcgccgggcaacccgtatcaccgcctgctagcttgtttgcggagcgtccac
aaggtcgccacgtgctga
DBGET
integrated database retrieval system
