Rousettus aegyptiacus (Egyptian rousette): 107518241
Help
Entry
107518241 CDS
T06036
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107518241 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ray04131
]
107518241 (VPS8)
Membrane trafficking [BR:
ray04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107518241 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps8
Clathrin
zf-RING_11
zf-RING_2
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
zf-C3HC4
PHD
ANAPC4_WD40
GED
Motif
Other DBs
NCBI-GeneID:
107518241
NCBI-ProteinID:
XP_016015194
LinkDB
All DBs
Position
Unknown
AA seq
1497 aa
AA seq
DB search
MDTNDKIGLYACLQGNCRSTLKFGNVRDHHSGHCDIRLKTKQKLTWINRIQLLKVNMENE
PDHENVEQSLCAKTTEEELNKSFNLEASLSKFSYIDLDKELEFKTDLIDDKEFDIPQVDT
PPTLESILNETDDEEESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKKKLPD
SFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGKDQNQ
ALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPG
TAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLHSK
PDLKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVHNY
VNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLHYDLINFTWINSRTVVLLDSVEKL
HVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGGQI
FYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDANKRKAV
VADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQMYDK
LSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMDITSL
DIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFKVIAPPLNAGKTLTDEQVVMGNK
LLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASLEEEIYPYVRTLLHFD
TREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAK
PDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEKAE
FYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQKAMDH
IEELVSLKPCKAAELVATHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGVHVNQELLQI
SPCITELFIELLCQFNPNQVIETLQVLECYRLEETIQIAQRYQLHEVTAYLLEKKGDIHG
AFLIMLKRLQSKLQEITQQDENTKEDSSLKEVEETTVETIALCQRNSHNLNQQQREALWF
PLLEAMMAPQKLSSSAAPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYGKGKL
GEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCHLRASVTRGLNPKQDYCSICLQQ
YKRRQEMADEIIVFSCGHLYHSFCLQNKECTIEIEGQTRWTCYKCSSSNKVGKLSENSSE
IKKGRITPSQVKISPCCLPSKGDPAVKKVSFKGKNNFLLLCVYSPFNSFLKMTMIFNHFN
AIKYSFRLVALMMYQQNFFVLPGKPSGGLGLASVSYHLGTSCSKIPILSTRCASLYQ
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggataccaatgacaaaatcggtctctatgcttgtctgcaggggaactgcagatctact
ctaaagtttgggaatgtgagagatcatcattcaggtcattgtgatataagactcaaaaca
aaacaaaaacttacttggatcaacagaatacaattattaaaagtaaatatggaaaatgaa
ccagaccatgaaaatgtggaacagagcctctgtgccaagactactgaagaagaactgaat
aagtctttcaatctagaagcttcactttcaaagttctcttacatagatctggacaaggaa
ttggaattcaaaactgatctgattgatgacaaggagtttgatattcctcaagttgatact
cctccaacgctggaaagtatactaaatgagactgatgatgaagaagagtcttttgttctt
gaggatcctacattgttaaacattgatactattgattctcattcctatgatacttcatct
gtggcaagctcagatagtggtgacaggactaacttaaagaggaagaagaaattacctgat
tctttttcacttcatggatcagttatgcgacactcacttttgaagggaatttctgcgcag
atagtgtctgcagctgacaaagtagacgctggcttgcctacagcaattgcagtatccagt
ctgatagcagtgggtacatctcatggattggctttaatatttggaaaagatcagaatcaa
gctttgcgactctgtctgggtagcactagtgttggaggtcagtatggagccatctctgcc
ctcagtattaacaatgactgctcaagacttctctgtggctttgctaaaggacagatcact
atgtgggatttggccagtggaaaacttctaagatcaataacagatgctcatcctccagga
acagcaatattacatattaagtttacagatgatccaactcttgcaatttgcaacgacagt
ggaggctctgtttttgaattgacgtttaagagagtaatgggagtgagaacgtgtgaatct
cgatgcctattcagtggttccaagggtgaagtgtgctgtatcgagcctctccattccaag
cctgacttgaaagatcatcccatcacacagttttccttattggccatggcatccctaacc
aagatactggtcattggattgaaaccatccttgaaagtatggatgacttttccctatgga
cggatggatccttccagtgtcccactgctggcctggcactttgtggctgtgcataattat
gtgaatcccatgctcgctttctgcagaggagatgttgttcattttcttttggttaagaga
gatgaatctggagcaatacatgttactaagcaaaagcacctgcacctacactatgacctc
atcaacttcacctggataaactcacgcacagttgtgctcttggacagtgtagagaagttg
catgtgatcgatcggcaaactcaagaagaactggaaacagtggagatctcagaagttcaa
ttggtctacaacagcagccatttcaaatcactagccactggaggaaatgttagtcaggca
ctggctttggttggagagaaggcttgttatcaatccatcagtagctatggtggtcagatc
ttttatttgggaaccaaatctgtttatgtgatgatgctaaggagctggagagagagagtg
gatcatctcctgaaacaagattgtcttacagaagcattggctcttgcatggtcttttcat
gaaggaaaagcaaaagctgtagtgggattatcgggggatgccaataagcgaaaggctgtt
gttgcagatcgaatggtagaaatcctattccattatgcagatcgagctctgaaaaaatgt
ccagaccagggaaaaatccaagtgatggagcagcattttcaggatatggtgcctgtcata
gttgattactgccttctgctacagcgaaaggatcttctatttagccagatgtatgataaa
ttaagcgagaattcagtagccaaaggagtgtttttggagtgccttgagccatatatttta
agtgataaactggtggggatcacaccccaggtaatgaaagatttgattgttcatttccaa
gataaaaagttaatggaaaatgtggaagccctcattgtacatatggatatcaccagctta
gatattcaacaggtagttctcatgtgttgggaaaatcgtctatatgatgctatgatctat
gtctacaacagaggcatgaatgagtttattagtccaatggagaaacttttcaaagtcatt
gctcctcctctgaatgcaggaaaaacactaacagatgaacaagtagttatgggcaacaag
cttcttgtatatattagctgttgtctagcaggtcgtgcctatccccttggtgacatccct
gaagatcttgttcccttggttaaaaaccaggtttttgaatttctaattcgcctgcactca
gcagaagcttcccttgaggaagaaatatatccgtatgttcggactttgctgcattttgac
acaagagaatttctaaatgttttggcactgacttttgaagattttaaaaatgacaagcaa
gctgtagaatatcaacaacgtattgtggacattttgttgaaagttatggtggagaattca
gattttactccctcacaagtggggtgtctcttcacattccttgcccggcagcttgcaaag
cctgataataccttgtttgtaaacagaaccctctttgatcaggtccttgaattcctctgt
agtcctgacgatgattcccgacactctgaaagacagcaggtccttttagaattgctgcag
gctggaggcatagttcaatttgaagaaagtcggctcattcgtatggcagaaaaagcagaa
ttctatcaaatttgtgaatttatgtatgaacgagaacaccagtatgacaaaattattgat
tgctatttacgtgacccactaagagaggaagaagtctttaactacattcacaacatctta
tctatccctggacacagtgcagaggagaagcagtctgtgtggcagaaagcaatggatcat
attgaggaacttgtgtccctgaagccctgtaaagctgcagagctggttgctactcacttt
tctgaacagattgaaacagtcattaaaaaacttcagaaccaggttttgcttttcaaattt
ctgcggagtcttcttgacccaagggagggtgttcatgtaaatcaagaattgcttcaaata
tctccctgtattacagagctgttcattgagttgttgtgtcagttcaacccaaaccaagtt
atagagacgttgcaagtccttgagtgctaccgcctagaagaaactatccagattgcccag
aggtatcaacttcatgaagtcactgcatatctgttagaaaagaaaggagatattcatggt
gccttcttaataatgctaaagagactacaaagcaaacttcaagagataacccaacaagat
gaaaataccaaagaggattcctcgttgaaggaggtagaagaaaccacggtagagacaatt
gccctttgccagagaaattcacataatctgaaccagcagcagagagaggcactctggttt
ccattattggaggcaatgatggcccctcagaagctgtctagttcagctgcacctcattta
cactctgaagctctgaagtctttgaccatgcaggttctaaacagcatggcagcatttatt
gcccttccatcaatcttacaaagaatcttacaggatccagtttatggaaaaggaaagctt
ggagagatccagggacttattctgggaatgctggatacctttaactatgaacaaaccctg
ctggaaacaactactagccttctaaaccaagatctccattggtcactgtgtcatctgaga
gcttcagtcaccaggggactgaatcccaagcaagattactgctctatatgtttgcagcag
tacaaaaggcgccaagaaatggctgatgaaattattgtctttagctgcggccatttgtat
cattcattctgtctgcaaaacaaagaatgcaccatagaaattgaaggacaaacaagatgg
acatgctacaaatgcagctcaagtaataaagtaggaaaattaagtgaaaattcatctgag
attaaaaagggaaggataactccatcacaggtaaaaatatccccatgctgtcttccatcc
aaaggggatcctgctgttaagaaggtgagttttaaaggcaaaaacaacttcctccttcta
tgtgtttattctccatttaacagttttctcaaaatgacaatgatttttaatcattttaat
gccatcaaatattctttccgattggttgccttaatgatgtatcagcagaatttcttcgtt
cttccagggaagccaagtgggggtttgggcctggcatcggtctcctaccacctggggact
tcttgttctaaaattcccatcctctccaccagatgtgcatccttgtatcagtga
DBGET
integrated database retrieval system
