Rousettus aegyptiacus (Egyptian rousette): 107519922
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Entry
107519922 CDS
T06036
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107519922 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ray03019
]
107519922 (XAB2)
03041 Spliceosome [BR:
ray03041
]
107519922 (XAB2)
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107519922 (XAB2)
Spliceosome [BR:
ray03041
]
Complex B
Other components
Prp19-related factors
107519922 (XAB2)
Complex C
107519922 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
107519922
NCBI-ProteinID:
XP_016018634
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRSERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKPRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQNKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtaatggcgcggctctcgcggtcggagcggccagatcttgtcttcgatgaagag
gacctcccctatgaggaagaaatcatgcggaaccagttctccgtcaaatgctggctccgc
tacatcgagttcaaacagggagccccgaagccccggctcaatcagctatatgagcgggct
ctcaagctgctgccctgcagctacaaactctggtaccgctacctgaaggcgcgccgggca
caagtgaagccccgctgtgtaactgaccctgcctacgaagatgtcaacaactgccacgag
agggcttttgtgtttatgcacaagatgccacgtctgtggctagattattgccaattcctg
atggaccagggccgcgtcactcacacccgtcgcactttcgaccgtgctctccgggcactg
cccatcacacaacactctcgtatttggcccttgtacctgcgcttcctgcgctcacaccca
ctgcctgagacagctgtgcggggctaccggcgcttcctcaagctgagtcctgagagcgca
gaggagtacattgagtaccttaagtcaagtgaccggctagatgaggctgcacagcgcctg
gccaccgtggtaaacgacgagcgcttcgtctccaaggccggcaagtccaactaccagctg
tggcacgagctctgcgacctcatctcccagaacccggacaaagtgcagtcgctcaacgtg
gacgccatcatccgtgggggcctcacccgcttcactgaccagctgggcaagctctggtgc
tcactggccgactattatatccgcagtggccacttcgagaaggctcgggatgtttacgag
gaagccatccggaccgtgatgaccgtgcgagacttcacacaggtgtttgacagttatgcc
cagttcgaggagagcatgattgcagctaagatggagactgcctcagagctggggcgggag
gaggaggatgacgtggaccttgagctgcgcctggctcgctttgagcagctcattagccgg
cggcccctgctcctcaacagtgtcttgctgcgccagaacccacaccatgtacatgagtgg
cacaagcgcgtggccttgcaccagggccgtccccgggagatcatcaacacgtacacagag
gctgtgcagacagtggatcctttcaaggctacgggcaaaccccacacgctgtgggtagcc
tttgccaaattttatgaggacaacgggcagctggatgatgcccgcatcatcctagaaaag
gccaccaaggtgagcttcaagcaggtggatgacctggcaagcgtgtggtgcgagtgtggc
gagctggagctccggcacgagaattatgaccaggccttgcggctgctgcgaaaggcaaca
gcgctgcctgcccgccgggctgagtactttgatggctcagaacctgtgcagaaccgtgtg
tacaagtcactgaaggtgtggtccatgcttgctgacctggaggagagccttggcaccttt
cagtctaccaaggccgtgtatgaccgcatcctggacctgcgcattgccaccccccagatc
gtcatcaactacgccatgtttctggaggagcacaaatacttcgaggagagcttcaaggca
tatgagcgcggcatctcactgttcaagtggcctaatgtgtcagacatctggagcacctac
ttgacaaaattcatcgcccgctacgggggccgcaagctggagcgggcacgggatctcttt
gagcaggcgttggatggctgcccccctaaatacgcaaagaccctgtacctgctgtacgca
cagctggaggaggaatggggcctggcccggcatgccatggctgtgtacgagcgtgctacc
cgggctgtggaacctgcccagcagtatgacatgttcaatatctatatcaagcgagcggcc
gagatctatggagtcacccacacccgcggcatctaccagaaagccatcgaggtgctatcc
gatgagcatgcccgggagatgtgcctgaggtttgcagacatggaatgcaagcttggggag
atagaccgcgcccgagccatctacagtttctgttctcagatctgcgaccctcggacaact
ggggccttctggcaaacgtggaaggacttcgaggtccggcatggcaatgaagacaccatc
agggagatgctgcggatccgccggagtgtgcaggccacgtacaacacgcaggtcaacttc
atggcctcacagatgctcaaggtgtcaggcagcgccacaggcactgtgtctgacctcgcc
cctgggcagagtggtatggatgacatgaagctactggagcagcgagcagagcagctggcg
gccgaggccgagcgcgaccagcccccaagggcccagaacaagatcctgtttgtgaggagt
gacgcatcccgggaggagctggctgagctggcgcagcaggccaacccagaggagattgag
ctgggcgaggatgaggacgaggatgagatggaccttgagcccaatgaggtgcggctggag
cagcagagcgtgccggccgccgtgttcgggagcctgaaagaagactaa
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