Rousettus aegyptiacus (Egyptian rousette): 107519949
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Entry
107519949 CDS
T06036
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X2
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107519949 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ray03400
]
107519949 (LIG3)
Enzymes [BR:
ray01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
107519949 (LIG3)
DNA repair and recombination proteins [BR:
ray03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
107519949 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
107519949
NCBI-ProteinID:
XP_016018691
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MTLAFKILFPSTVRALSRKELCLFREQHLWPDIKHFNQWSETGRLHGPCLLWKRKPVLSF
HEGSLRLRATCLVFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCIFEKLERARATTKKIEDLTELDGWEELEDNEKEQINQ
HITDLSSKTASTPKKKAVVQAKLTATGQVTSPVKGASFVTSTNTRKFSGFSAMPNNSGEA
RSNPTPRRSLSSSKCDPKHKDCLLRVFRKLCAMVAENPSYNTKTQIIQDFLRKGSAGDGF
HGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFE
QSKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHD
LKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVEKEPGQRRSLSVQASLMT
PVQPMLAEACKSIEYAMRKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVA
HFKDYIPLAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIY
FNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVMKASDLVDMINRVIREGLEGLVL
KDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPS
SQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKA
AVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERADFT
VVAGDEGSSTTGGSSGENEGTSKPSVSHKTRTSPKQTSASAKKAEGNLTSPNSKGGHKLT
AKPSLVKVGEKLVTKSPVKVGVKRKAPDETPCQAKVLLDIFTGVRLYLPPSTPDFSRLRR
YFVAFNGDLVQEFDMASATHVLGNRDKNPEAQQVSSEWIWACIRKRRLVAPC
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagattctcttcccatcaaccgtccgtgcactcagccgaaaggaa
ttgtgcctattccgagaacagcatctctggccagatataaaacatttcaaccagtggtca
gaaacaggtcggcttcatgggccctgcctactctggaaaagaaagcctgttctgtcattc
cacgaaggcagtctaagactacgtgccacctgccttgtcttcttgccagggtcgcatgtg
ggactctgcagtgggccctgtgagatggccgagcaacggttctgtgtggactatgccaag
cgaggcacagccggctgcaaaaaatgcaaggaaaagattgtaaagggtgtgtgccgaatt
ggcaaagtggttcctaatcctttctcagagtccgggggtgatatgaaagagtggtaccac
attaaatgcatatttgagaaactggagcgggcccgggccaccacaaaaaaaatcgaggac
ctcacagaactggacggctgggaagagctagaagataatgagaaagagcagataaaccag
cacattacagatctatcttctaagacagcaagcacaccaaagaagaaagctgttgtccag
gctaagctgacagctaccggccaggtgacatctccagtgaaaggtgcctcatttgttacc
agtaccaatacccggaaattttctggcttttcagccatgcccaacaactctggggaagcc
cgctcaaaccctacccctagaagaagtctttcctcaagcaaatgtgaccctaagcataag
gattgtctgctacgtgtgtttcggaagttgtgtgccatggtggctgaaaatcctagctac
aacacgaagactcagatcatccaggacttccttcggaaaggctcagcaggagatggtttc
cacggtgatgtgtacctaacagtgaagctgcttctaccgggtgttattaagagtgtttac
aacttgaatgataagcagattgtgaagctttttagccgcatttttaactgcaacccagat
gatatggcacgagacctagaacagggtgacgtgtcagagacgatcagagtcttctttgag
cagagcaagtctttccccccagctgccaagagcctccttaccatccaggaggtggacgaa
ttcctcctgcggctctccaagctcaccaaggaggatgagcaacaacaggccctgcaggac
atcgcctccaggtgtacagccaatgacctcaagtgcatcatcaggttgatcaaacatgat
ctgaagatgaactcaggtgcaaaacatgtgttagacgcccttgatcccaatgcctatgaa
gccttcaaagcctcacgcaacctgcaggacgtggttgagcgagttctccacaacgagcag
gaggtggagaaggagccaggccagagacgatctctaagtgtgcaggcctccctgatgacc
ccagtacagcccatgctggccgaggcctgcaagtccatcgagtatgcgatgaggaagtgt
cctaatggcatgttctctgagatcaagtatgatggggagcgagtccaggtgcataagaat
ggggaccacttcagctacttcagccgcagtctcaagcctgtcttacctcacaaggtggcc
cactttaaggactacatccccctggctttccctgggggccacagcatgatcttggattct
gaggtgctcctgattgacaacaagacaggcaaaccactgccctttgggactttgggagtg
cacaagaaagctgccttccaggatgctaatgtctgcctgtttgttttcgattgcatctac
ttcaatgatgtcagtctgatggacaggcctctgtgtgagcggcggaagtttcttcatgat
aacatggttgaaattcctaatcggatcatgttctcagaaatgaagcaagtgatgaaagcc
tcagacttggtcgacatgataaaccgggtgatcagagaggggttggaaggactggtgctg
aaagacgtgaagggtacatatgagcctggaaagcggcattggctgaaagtgaagaaagac
tatttgaatgagggggcaatggctgacacagctgacctggtggtccttggggccttctat
ggccaagggagcaaaggtggcatgatgtccatcttcctcatgggctgctacgatccaagc
agccagaagtggtgtacagtcaccaagtgttcaggtggccatgatgatgcaacacttgcc
cgcctgcagaaggagctggacatggtgaaaattagcaaggatcccagcaagatacctagc
tggctgaaaatcaacaagatctactatcctgactttatcgtcccagacccaaagaaagct
gccgtgtgggagatcacaggagctgaattctccaaatctgaggctcacacagctgatggg
atctccatccgattccctcgctgcacccgaatccgtgatgataaagattggaaatctgcc
actaacctcccccaactcaaggaactgtaccagctatccaaggagagggcagacttcact
gtggtggctggagatgaggggagctccactacagggggcagcagcggagagaatgagggc
acctcaaagccttctgtgtctcacaaaaccagaacctcccccaagcagacttctgccagt
gccaagaaggcagaaggaaatctgactagccctaacagcaaaggtggccacaagctgact
gcaaagccttctctggtgaaagtgggagagaagctggtcacaaagtcgcctgtgaaagtt
ggggtgaagcggaaggctcctgatgagacgccatgccaagcaaaggtgctactagacatc
ttcactggggtgcggctctacctgccgccctccacaccagacttcagccgtctcagacgc
tacttcgtggcatttaatggggacttggtacaggaatttgacatggcctcagctacacat
gtgctgggtaatagggacaagaaccctgaagcccaacaggtctcctccgagtggatttgg
gcatgtatccggaaacggagactggtagctccctgctag
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