Rousettus aegyptiacus (Egyptian rousette): 107520387
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Entry
107520387 CDS
T06036
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X3
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107520387 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ray03019
]
107520387 (EDC4)
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107520387 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
107520387 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
DUF445
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
107520387
NCBI-ProteinID:
XP_016019618
LinkDB
All DBs
Position
Unknown
AA seq
1406 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPSSESQRPSNAYNGDLNGLLVPDPLCSGDGTS
ANKPGLRAMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLTFAHLNSSQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVDVSQIKQGFIVVKGHSTYL
SEGALSPDGTVLATASHDGFIKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFAFGESQPELSSGGLGSAAHGSQPDLRRIVELPAPADFISLSTETKPKLMTPDAFMT
SSTSLQQISASPSNSSGSSSSGSSSSSSSSSLTAVSAMSSTSAVDPSLSRLPATRPPEEL
TLSPKLQLDGSLTMSSSTSLQTSPRSLLPGLLPGPADKLTPKGPGQVPTAASGLSLELQE
VEPLGLPQASPSRTRSPDVISSASTVLSQDIPEIASEALSRGFGSSAPEGLEPDSMASAA
SALHLLSPRPRPELGPQLSLDGGSGDGDRHSTPSLLEAALTQEATASDSQVWPTAPDITR
ETCSSLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASIASAAGGF
GTKVSTPRLPAKDWKTKGSPRASPKLKRKGKKDDGESTAGSRLMEHQVTEPPEDWPAIIW
QQQRELAELRHSQKELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQR
GGQLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATRLT
AVEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQ
QINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRSLVSTLQGATEQMAATVSSS
VRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQASVTSSIMQAMRSAAGTPVP
AAHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQ
PVLLSFIQQLASDLGTRTDLKLSYLEEAVMHLDHTDPITRDHMGSVMAQVRQKLFQFLQA
EPYNSLGKAARRLSLMLHGLVTPTLP
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctacgggacatcctg
aagctggaccggcccgcggggggccccagttcagagagccagcggccatctaacgcctac
aatggggacctcaatggactcctggtcccagaccccctttgctcaggtgatggtacttca
gcaaacaagcctggtctccgggccatgccacctattaacctgcaggagaagcaagtcatc
tgcctttcaggagatgacagctctacctgcattgggattttggccaaggaggtggagatt
gtggccagcagtgactctagcatctcgagcaaggcacgagggagcaacaaggtgaaaatc
cagcctgttgccaagtatgactgggagcagaaatactactatggcaacctgattgctgtg
tccaactccttcttggcctatgccattcgggctgccaataatggctcagcgatggtgcgg
gtgatcagcgtcagcacttcggaacggaccttactcaagggcttcacaggcagtgtggct
gacctgacctttgcacacctcaactcttcacagctggcctgcctggatgaggcaggcaac
ctgtttgtgtggcgcttggctctggttaatggcaaaattcaagaagagattttggttcat
atccggcagccagagggtacaccactgaaccactttcgtagaatcatctggtgccccttc
atccctgaggagagtgaggattgctgtgaagaaggcagcccaacggtggccctgttgcat
gaggaccgggctgaggtgtgggacctagacatgcttcgctccaaccacagcacctggcct
gtggatgtcagccaaatcaagcagggcttcattgtggtgaaaggccacagcacatacctg
agtgaaggggccctctcacctgatgggactgttctggccaccgcaagccatgatggcttc
atcaagttctggcagatttacattgaggggcaggatgagccaaggtgtctgcacgagtgg
aagcctcatgatgggcggcccctttcctgcctcctattctgtgataaccacaagaaacag
gaccctgatgtccctttctggaggttcctcattactggcgctgaccagaatcgggagctg
aagatgtggtgcacggtgtcctggacctgcctgcagaccattcgcttctccccagatatc
ttcagctcagtgagtgttccccctagcctcaaagtttgcctggatctctcagcagaatac
ctgattctcagtgatgtgcaacggaaggtcctctacgtgatggagctgctgcagaaccag
gaggaaggccgtgcctgcttcagctccatctctgagttcctgctgacccaccctgtcttg
agctttggtatccaggtcgtgagtcgctgccggctgcggcacactgaggtgctgcctgcc
gaggaagagaatgacagcctaggggctgatgggacccacggagctggtgccatggagtct
gcagctggtgtgctcatcaagctcttctgtgtgcatactaaggctttgcaagatgtgcag
atccgcttccagccacagctaaaccctgatgtggtggccccactccctacccacactgcc
catgaggactttgcatttggagagtctcagcctgaactgagctccggggggctgggatca
gctgctcacggctcccagcctgacctccgacgcattgtggagctgcctgcacctgctgac
ttcatcagtctgagcactgagaccaagcccaagctgatgacaccggatgctttcatgaca
tctagtacctccctgcagcagatctctgcatcccctagtaatagcagtggcagcagcagc
agtggcagcagcagcagcagcagcagctcctctcttacagctgtgtctgccatgagcagt
acctcagctgtggatccctccttgtccagacttcctgccaccaggccacctgaggagctg
accttgagccccaagctacagctggatggcagtctgacaatgagcagcagtaccagcctg
cagacaagcccacgcagcctcctgcccggcctgttaccaggtccagctgacaaattgact
cccaaagggcctgggcaggtgcctactgctgcctctggactgtccctggagctgcaggaa
gtggaacccctggggctaccccaggcttcccccagccgtacacgctcccctgatgttatt
tcctcagcttccactgtcctgtcccaggacatccctgagatcgcatctgaggccctgtcc
cgtggctttggctcctctgctcctgagggccttgagccagacagtatggcctcagctgct
tcagcattacacttgctgtccccacggccacggcccgagcttgggccccagcttagcctg
gatggaggctctggggatggggatcggcatagtacaccttccctcctggaggcagccttg
acccaagaggctacagcctctgacagtcaggtctggccaacagcaccagacattactcgg
gagacctgcagcagcctggcagaaagccctaggaatggcctccaggagaagcacaagagc
ttggccttccaccgaccaccttatcatctgctgcagcaacatgacagccaggatgccagt
gctgaacaaagtgaccatgatgatgaggtggccagcattgcttctgctgcagggggcttt
ggcaccaaagtttccactccacggctgcctgccaaggactggaagaccaagggatccccg
cgggcctcacctaagctcaagaggaagggcaaaaaggatgacggggaatcgactgcggga
tcccggctcatggagcaccaggtgacagagccccctgaggactggcctgcaataatttgg
caacagcagagagagctggcagagctgcggcacagccaaaaagagctactacagcgtctg
tgcacccagctcgaaggcctgcagagtaccgtcacaggccatgtagaacgtgccctcgag
tctcggcacgaacaggagcagcggcggttggagcgggcactggcagaggggcagcaacgg
ggtgggcagctacaagagcagctgacgcaacagctgtcccaggcgctgtcttcagctgtg
gctgggaggctagagcgcagcatacgggatgaaatcaagaagacagtgcctccatgtgtc
tctaggagtctggaacccgtggcaggccaactgagtaactcagtggccaccagactcaca
gctgtggagggaagcatgaaagagaatatctccaagctgctgaagtccaagaatttaaca
gacgctattgcccgagcagcagcagacacgttacaagggccaatgcaggctgcctaccgt
gaagccttccagagtgtggtgctgcctgccttcgagaagagctgccaggccatgttccaa
cagatcaatgatagcttccgactgggcacacaggaatacttgcaacagttagagagccac
atgaagagccggaaggcacgagaacaggaagcgcgggagcctgtgttggcccagctgcgg
agcctggtcagcacactgcaaggtgccactgagcagatggcagccactgtgtctagcagt
gttcgggctgaggtgcaacaccagctgcatgtggctgtgggcagcctgcaggagtcaatt
ttagcacaggtacagcgcattgttaagggtgaggtgagtgtggcactgaaggagcagcag
gcctccgtcacctctagcatcatgcaagccatgcgctcagctgcgggcacacctgtccca
gctgcccacctcgactgccaggcccagcaagcccatatcttgcagctgctgcagcagggc
cacctcaatcaggccttccagcaggccctcacggctgctgacctgaacctggtgctgtat
gtgtgtgaaactgtggacccaggccaggtctttgggcagccaccctgcccactctcccag
cccgtgctcctttccttcatccagcaacttgcctctgaccttggcactcgaactgacctc
aagctcagctacctggaagaggctgtaatgcacctggaccacactgaccctatcactcga
gaccacatgggctctgtcatggcccaggtgcgccagaagttattccagttcctgcaggct
gagccatacaactcacttggcaaagcggcccggcgtcttagcctcatgttgcatggcctt
gtgacccccaccctcccttag
DBGET
integrated database retrieval system
