Rousettus aegyptiacus (Egyptian rousette): 107520847
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Entry
107520847 CDS
T06036
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03265
Virion - Ebolavirus and Lyssavirus
ray04142
Lysosome
ray04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
107520847 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107520847 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
107520847 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ray02000
]
107520847 (NPC1)
Transporters [BR:
ray02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
107520847 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
107520847
NCBI-ProteinID:
XP_016020587
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MSARGRVLGLLLLLLCPAQVSGSREPGWAVGDGVFSQSCVWYGECGIASGDKRYNCKYSG
KPKLLPEDGYDLVQELCPGFFFGNVSLCCDVQQLRTLKDSLQLPLQFLSRCPSCFYNLLN
MFCELTCSPRQSEFLNITATEDYVDPVINQTKTNVKELQYYIGESFANAMYNACRDVEAP
SSNDKALGLLCGKDAKACNATNWIEYMFNKNNGQAPFTIIPIFSDLPAHGMEPMNNATKG
CDESVDEVTGPCSCQDCSAVCGPKPKPPPPPVPWRILGLDAMYVIMWTTYMAFLIVFFGA
FFAVWCYRKRYFVSEYTPIDSNIAFSVNARDKGMARLLTSTLSPSPTLPGEASCCDPLGA
AFEGCLRRLFTQWGSFCVRNPGCVIFFSLVFIATCSSGLVFVQVTTNPVDLWSAPNSQAR
LEKEYFDTHFGPFFRVEQLIIQAPHTAMHTYQPYPAGSDVPFGPPLNIEILHQVLDLQTA
IENISVSYNNETVSLQDICLAPLSPYNKNCTIMSVLNYFQNSHSMLDHKIGDDFFVYADY
HTHFLYCVRAPASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNN
YYNDTEKLQRAQVWEREFINFVKNYKNPNLTISFTAERSIEDELNRESNSDIFTVVISYA
VMFLYISIALGHIKSCSRLLVDSKVSLGITGILIVLSSVACSLGIFSYAGIPLTLIVIEV
IPFLVLAVGVDNIFILVQTYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLG
ALSVMPAVHTFSLFAGMAVLIDFLLQITCFVSLFGLDIKRQEKNRLDILCCVRGAEDGTG
IQASESCLFRFFKNSYSPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQSLSVPDD
SYVMDYFKSLSQYLHAGPPVYFVLEEGHNYTSLAGQNIVCGGMGCNNDSLVQQIFNAAEL
DNYTRIGFAPSSWIDDYFDWIKPQSSCCRVYNGTDRFCNASVADPACIRCRPLTPEGKQR
PQGRDFMRFLPMFLSDNPNPKCGKGGHAAYGSAVNILGNDTGVGATYFMTYHTVLQTSAD
FIDAMRKARLIADNITKTMSQEGSNHRVFPYSVFYVFYEQYLTIIDDTIFNLCVSLGAIF
LVTVVLLGCELWSAVIMCVTIAMILVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSH
ITRAFTVSAKGSRVERAEEALSHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYL
AMVLLGASHGLIFLPVLLSYIGPSINKAKSLATQERYKGTERERLLNF
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcacgcggccgggtcctgggcctcctcctgttgctgctgtgcccggcgcaagtg
agtggcagccgggaacccgggtgggctgtgggagacggggtgttttcacagtcctgtgtt
tggtatggagagtgtggaattgcatctggagataagaggtacaattgcaaatattctgga
aaaccaaaacttttgccagaagatggttatgacttagtgcaggaactctgtccaggattc
ttctttggcaatgtcagtctttgttgtgatgttcagcagcttcggacattgaaagacagc
ctgcagctgcctctacagtttctgtccagatgtccttcctgtttttataacctactgaac
atgttttgtgagctgacatgtagccctagacaaagtgagtttctgaacattacagcaact
gaagattatgtcgatcctgttataaatcagacaaaaactaatgtaaaagaattgcagtac
tatattggagagagttttgccaatgcgatgtacaatgcctgcagggacgtggaggccccc
tcaagtaatgacaaagccttgggactcctgtgtgggaaggacgccaaagcctgcaatgct
accaactggattgagtacatgttcaataagaacaatggccaggcacctttcaccatcata
cccattttttcagatcttccagcccatgggatggagcccatgaacaatgccaccaagggc
tgtgatgagtctgtggatgaggtcacggggccatgcagctgccaggactgttctgctgtt
tgtggccccaagcccaagccaccgccccctcctgttccctggagaatcttgggcttggat
gccatgtatgtcatcatgtggaccacctacatggcatttttaattgtgttttttggagca
ttttttgctgtgtggtgctacaggaaacggtattttgtctccgagtacactcccattgat
agcaatatagctttctcagtcaacgccagagacaaaggaatggctcggctcttaacctcc
accctctctccctctcccactcttccaggggaggcatcctgctgcgaccctcttggtgca
gcatttgagggctgtttgaggcggctcttcacacagtggggttccttctgtgtccgaaac
cctggctgcgttattttcttctccctggtctttatcgccacatgttcttcgggcctggtg
tttgtccaggtcacaaccaatccagttgacctctggtcagcccccaacagccaggcgcgt
ctggaaaaagagtactttgatacccactttgggcctttctttcgcgtggagcaactcatc
atccaggccccccacaccgccatgcacacttaccagccgtaccccgcaggatctgatgtg
ccctttggacctccgctgaacatagaaattttgcaccaggttcttgacttacaaacagcc
atcgaaaacattagtgtgtcttataacaacgagaccgtgtcacttcaagacatctgcttg
gcccctctctcaccatataacaagaactgtaccattatgagtgtgttgaattacttccag
aatagtcactcgatgctggaccacaaaataggggatgacttctttgtgtatgcggattac
cacacgcactttctgtactgtgtacgggctcctgcctctctgaatgataccagtttgctc
catgatccttgcctgggtacatttgggggaccagtattcccatggctcgtgttagggggc
tatgatgatcaaaactacaataacgccacagcccttgtaattacctttcctgtcaataac
tattataatgatacagagaagctccagagggcccaggtctgggaacgagagtttattaat
tttgtgaaaaactataagaatccaaatcttaccatttctttcactgccgaaagaagtatt
gaagatgaactaaatcgtgaaagtaacagtgatatcttcactgttgtaatcagctatgcc
gtcatgtttctgtatatttccatagccttggggcacatcaaaagctgtagcagacttttg
gtagattctaaagtctccctcggcatcacgggtatcctcatcgtgttgagctcggtggcg
tgctcgttgggcatcttcagctacgctgggatccctctcaccctcattgtgattgaagtc
atcccgttcctggtgctggccgttggggtggacaacatcttcattctggtccagacctac
cagagagatgaacgtcttcaaggggaaaccctggaccagcagctgggcagggtccttgga
gaagtggctcctagtatgttcctgtcatccttttcagagacagtagcatttttcttagga
gcattgtcagtgatgccggctgttcatactttctctctgtttgcgggaatggcagtcctc
attgacttccttcttcagattacctgttttgtgagtctcttcgggttagacattaagcgt
caagagaaaaaccggctagacatactttgctgtgtccgaggtgcagaagatggaacaggc
atccaggcctcagagagctgcttgtttcgtttcttcaaaaactcctattctccacttctg
cttaaggactggatgcgaccaatcgtgatagcagtattcgtgggtgttctgtcattcagt
attgcagtcctgaacaaagtagaaattggattggatcaatctctttcagtgccagatgac
tcctacgtgatggattatttcaagtccctcagtcagtacctgcatgcaggcccgcccgtc
tacttcgtcctggaggaagggcacaactatacttctctggcagggcagaacatagtgtgc
gggggcatgggctgcaacaacgactccctggtgcagcagatcttcaacgcggcggagctg
gacaactatacccgaataggctttgctccctcctcctggattgacgattactttgattgg
attaagccacaatcttcttgctgtagagtctacaatggcactgaccggttctgcaatgct
tcagtggccgaccctgcctgcatccgctgcaggcctctgactcccgagggcaagcagagg
cctcagggtagagacttcatgagattcctgcccatgttcctttccgataacccgaacccc
aagtgtggcaaagggggacatgctgcttatgggtcagcagttaacatccttggtaatgac
acgggtgtcggagccacgtacttcatgacctaccacaccgtgcttcagacctctgctgac
tttattgatgccatgagaaaagctcgcctcatcgctgataatatcaccaaaaccatgagc
caggaaggaagtaaccaccgtgtattcccatacagcgtgttttatgtattttacgaacag
tacctgactattattgatgacacgatctttaacctctgcgtgtcccttggagcgatcttt
ttggtgaccgtggttctgctgggctgtgagctgtggtctgcagtgatcatgtgtgtcacc
atcgccatgatcttagtcaacatgtttggtgtcatgtggctgtggggcatcagtctgaac
gcagtttccttggtcaacttggttatgagctgtggcatctccgtggagttctgcagccac
ataacgagagcattcacagtgagtgcaaagggaagccgtgtggaacgggcagaagaggcg
ctctctcacatgggcagttctgtattcagtggaatcacacttacaaagtttggagggatt
gtggtattggcctttgccaaatctcaaattttccagatattttacttcaggatgtattta
gctatggtcttactgggagccagtcatggactaatattcctccctgtcttactcagttat
ataggaccatcaataaataaagccaaaagtttggctactcaagagcgatataaaggtaca
gagagagaacgactcctaaatttctaa
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