Rousettus aegyptiacus (Egyptian rousette): 107521246
Help
Entry
107521246 CDS
T06036
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03082
ATP-dependent chromatin remodeling
ray04714
Thermogenesis
ray05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107521246 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
107521246 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
107521246 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ray03021
]
107521246 (SMARCC2)
03036 Chromosome and associated proteins [BR:
ray03036
]
107521246 (SMARCC2)
Transcription machinery [BR:
ray03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107521246 (SMARCC2)
Chromosome and associated proteins [BR:
ray03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107521246 (SMARCC2)
PBAF complex
107521246 (SMARCC2)
GBAF(ncBAF) complex
107521246 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
107521246
NCBI-ProteinID:
XP_016021246
UniProt:
A0A7J8JNH0
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMENTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNIPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGAVEEEAKEKTSEAPKKDEEKGKEGDSEKE
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPTVHGLAMA
PASVAPAPAGSGAPPGSLGPSDQIGQAGSTAGPQQQQTAGAPQPGAGPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADSISINV
PPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS
PAIVAAVQGNLLPSASPLPDSGTSLPPDPTAPSPGTVTPVPPPQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggctgcggacacc
gtgacccagttcgacaacgtgcggctttggctcggcaaaaactacaagaagtatattcaa
gctgaaccacccaccaacaaatccttgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcacctctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgacttccagaatccatcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaagtccttggtgcagaataattgcctgtctcgacca
aacattttcctgtgcccagaaattgaacccaaactgctgggaaaattaaaggacattatc
aagagacaccaaggaacggttactgaggataagaacaatgcctcccatgttgtttatcct
gtcccaggaaacctagaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttatgacacatggatccctgccagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaag
tggatcctagacacagataccttcaatgaatggatgaatgaggaagactatgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacattgacagatgag
gtgaacagcccagattcagatcgacgggacaagaagggggggaactataaaaagaggaag
cgctccccttctccttcaccaaccccagaagctaagaagaaaaatgctaaaaaaggtccc
tcaacaccttataccaagtccaagcgtggccatagagaagaggagcaagaagacctgaca
aaggacatggatgagccctcaccggtccccaatgtagaagaggtgacattgcccaaaaca
gtcaacactaaaaaggactcagagtcagccccagtcaaaggaggcaccatgactgacttg
gatgaacaggaggatgaaagcatggagaacacgggcaaggatgaggatgagaacagtacg
gggaacaagggggagcagaccaagaatccggacctgcatgaggataacgtaactgaacag
acccaccacatcatcattcctagctacgcggcctggtttgactataatagtgttcatgcc
attgagcgaagggctctccccgagttcttcaacggcaaaaacaagtccaagactccagaa
atctacctggcctatcgaaacttcatgattgacacttaccggctaaacccccaggagtac
ctcacctccactgcctgccgcagaaacctagcgggtgatgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
acaccaatggggcctccacccacttctcacttccatgtcttggcagacacaccttcaggg
ttggtgcctctgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcggaagggcaaagagctggatgacctggtaccagagaccgctaagggcaagccagag
ctgcagacttctgcttcccaacaaatgctcaacttccctgacaaaggcaaagagaaacca
acagacatgcagaactttggcctgcgcacagacatgtacacaaagaagaacatcccctcc
aagagcaaagctgcggccagtgcaactcgagagtggacagaacaggagacactgctcctc
ctggaggcactggaaatgtacaaagatgattggaacaaagtatcagagcatgtgggaagc
cgcactcaggacgagtgcatcttgcattttcttcgtcttcccattgaagacccatacctg
gaggactcagaggcctctctgggccccctggcctatcagcccatcccttttagtcagtca
ggcaaccctgttatgagcacagttgccttcctggcttctgtcgtcgatcctcgagtcgcc
tctgctgctgcgaagtcggctctagaagagttctccaaaatgaaggaagaggtacccaca
gccttggtggaggctcatgttcggaaagtggaagaagcggcaaaagtgacaggcaaggca
gacccagccttcggtctagaaagcagtggcattgctggaaccacctctgatgagcctgag
cgtattgaggagagcgggactgacgaggcacgggcggaaggccaggccacagaggagaag
aaggagcccaaggaaccccgagaaggagttggggctgtagaggaggaagcaaaggagaag
accagcgaggctcccaaaaaggatgaagagaaagggaaggaaggtgacagtgagaaggag
tcagagaagagtgatggggaccccatagttgaccctgagaaggaaaaggagccaaaggag
gggcaggaggaagtgctgaaggaagtggtggagtcggaaggggaaaggaagaccaaggtg
gagcgggacatcggtgagggcaatctgtccactgctgctgccgctgccctggctgctgct
gccgtaaaggccaagcacttggctgccgttgaggagagaaagatcaaatctctggtggcc
ctgctggtagaaactcagatgaaaaagttagaaattaaacttcggcactttgaggaacta
gagacgatcatggaccgggagcgagaagcactggagtatcagaggcagcagctcctggcc
gacagacaagcctttcacatggagcagttgaagtatgcggagatgagagcccggcagcag
cacttccaacaaatgcaccaacagcagcagcagccaccaccagccctgcccccaggctcc
cagcctatcccacctacaggtgctgctgggccacccacggtccacggcttggctatggct
ccagcctctgtggcccctgctcctgctggcagtggggcccctcctggaagcttgggcccc
tctgatcagattgggcaggcagggtcaactgcagggccacagcaacagcaaacagctgga
gccccccagcctggggcaggcccaccaggggtaccaccccctggaccccatggcccctca
ccgtttcccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
cctcctgctccatccatcatcccatttggtagtctagctgactccatcagtattaacgtt
ccccctcctcctaacctgcatgggcatcaccaccatctcccgtttgccccgggcactctc
cccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgacc
accaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagc
cctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagac
tcaggcacctctctgcctccagatcccacagccccgagcccaggcacagtcacccctgtg
ccacctccacagtga
DBGET
integrated database retrieval system
