Rossellomorea aquimaris: U9J35_01820
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Entry
U9J35_01820 CDS
T09670
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
raz
Rossellomorea aquimaris
Pathway
raz03420
Nucleotide excision repair
raz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
raz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U9J35_01820 (pcrA)
03430 Mismatch repair
U9J35_01820 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raz03400
]
U9J35_01820 (pcrA)
Enzymes [BR:
raz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U9J35_01820 (pcrA)
DNA repair and recombination proteins [BR:
raz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U9J35_01820 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
U9J35_01820 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Sgo0707_N2
DEAD
Motif
Other DBs
NCBI-ProteinID:
WRP06931
LinkDB
All DBs
Position
327744..329969
Genome browser
AA seq
741 aa
AA seq
DB search
MQFLTDRLLNGMNPEQAEAVKATEGPLLIMAGAGSGKTRVLTHRIAYLMVEKGVNPYNIL
AITFTNKAAREMKDRIHNILGGASDNIWISTFHSMCVRILRRDIDRIGMNRNFTILDSTD
QQSVIKAILKEKNIDPKKFDPRSLLGSISSAKNELTTPEELSKQVGGYYDQVVSDVYTEY
QKRLRKNQALDFDDLIMTTIQLFQRVPEVLEFYQRKFQYIHVDEYQDTNRAQYMLVKLLA
SRFQNLCVVGDSDQSIYRWRGADIANILSFEKDYPRATVIFLEQNYRSTKRILQAANEVI
QKNSNRKPKNLWTENHDGEKISYFRADTEQTEAQFVTGKIKEMTESGKRKYSDFAILYRT
NAQSRVMEEVLLKSNIEYSIVGGIKFYDRKEIKDILAYLRLISNPDDDISLMRVINVPKR
GVGATSVDKIARYAQDHDISMFSALEEADFIGLSPKITKAVIEFKEMVKGYTGMQEYLSV
TELVEEILEKSGYIDMLKAEKSIESQSRLENLDEFLSVTKSFEQSNDDKSLVAFLTDLAL
VADIDKLDEDDQPKDSVILMTLHAAKGLEFPIVFLMGMEEGVFPHSRSLMEEDEMEEERR
LAYVGITRAEEQLYLTNAQMRTLFGQTKMNPVSRFIQEIPAELLDDVMAEKKSAFTPFGK
SAAKAPTRPAPRKPVSRPVQTTTGGESVAWQVGDKAQHKKWGTGTVVSVKGSGDSVELDI
AFPSPMGIKRLLAKFAPIEKA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttgactgatcgattgttgaatggaatgaatcctgagcaggcggaagctgtg
aaggcgacagaagggccgttactgatcatggcaggggcaggctcaggtaagacaagagta
ttgacgcatcgaattgcgtatctgatggtagaaaaaggggtcaacccctataacatatta
gcgattacctttacaaataaggcagcgagagagatgaaggatcgtattcataacatactg
ggcggtgcttctgataacatttggatctcaaccttccacagcatgtgtgtgcgaatcctg
cgtcgtgatattgatcgcatcgggatgaaccgtaattttacgatccttgattctaccgat
cagcagtcggtgatcaaagcgattttaaaagaaaagaatattgatccgaaaaaatttgat
ccccgttcgcttttgggatccatcagctctgcaaagaatgagctgacgactcccgaagaa
ttatccaaacaggtagggggatattacgatcaagttgtctctgatgtgtacacagaatat
cagaagcgtttacgtaagaatcaggcgttggattttgatgatttgatcatgacgacgatt
caactgtttcagcgtgtcccggaagtcctggaattctatcaaagaaagttccaatacatc
catgtggatgagtatcaggatacgaacagagctcaatatatgcttgtgaaattgctggct
tcccgctttcagaacttgtgtgtagtgggggattccgatcaatcgatttatcgctggcgc
ggtgcggacattgccaatatcctatcctttgaaaaggattatccaagagcaaccgttatt
ttccttgaacaaaactatcgttcaacgaagaggatcctgcaggcggcgaatgaagtgatt
caaaagaactcgaatcgtaaaccgaagaatctttggacggaaaatcatgacggagaaaag
atttcgtatttcagagcggataccgagcagaccgaagctcaatttgtgacaggtaaaatc
aaagaaatgacggaaagcggcaagaggaagtattccgatttcgccattctttatcgaaca
aatgcccagtcccgtgtgatggaggaagttcttttaaaatcaaatattgaatactccatc
gtcggcggaatcaagttctatgaccgtaaagagatcaaggacattctggcttacctgagg
ctcatctcgaacccggatgatgacatcagccttatgcgtgtcattaacgttccaaagcgg
ggcgtaggagcaacctctgtagataaaattgcccgttatgcacaggatcacgatatttcc
atgttcagtgccttggaagaagcggattttatcggcctaagtccgaaaatcacgaaagcc
gtcattgaattcaaggaaatggtgaaaggttatacaggcatgcaggaatatctgtctgta
acggaacttgtagaagaaatactggagaaatccggttacatcgatatgttaaaagcagaa
aagtcgattgagtctcaaagccgcttggagaacttggacgagttcttgtctgtaacgaaa
agcttcgaacagtccaacgatgacaagagtctggtcgcatttttaacggatctggcatta
gtggcggatatcgataagcttgatgaagatgatcagccaaaagactcggtcattctgatg
acccttcatgctgcaaaaggtcttgagttccctatcgtatttctgatggggatggaggaa
ggggttttcccacacagtcgttcccttatggaagaagacgagatggaagaagaacgccgt
ctggcttatgtagggatcacccgtgcagaagaacagctttatttaacaaatgctcaaatg
cgaacactcttcgggcagacgaagatgaaccctgtctcccggttcattcaggagattcca
gctgaactgttggatgacgtgatggcagagaagaagagtgccttcacacctttcgggaaa
tcagcggcgaaagcacctacgcggcctgcccctcgtaagcccgtttcacgtccggtccaa
acgacaaccggtggtgagtctgttgcatggcaagtaggggacaaagcccagcataagaaa
tggggtacagggacggtcgttagtgtgaaaggatccggagacagcgttgagctcgatatt
gcgttcccgagtccaatgggaatcaagcgtcttcttgccaaattcgcacctatagaaaaa
gcgtaa
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integrated database retrieval system
