Rossellomorea aquimaris: U9J35_02485
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Entry
U9J35_02485 CDS
T09670
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
raz
Rossellomorea aquimaris
Pathway
raz03420
Nucleotide excision repair
raz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
raz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U9J35_02485
03430 Mismatch repair
U9J35_02485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raz03400
]
U9J35_02485
Enzymes [BR:
raz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U9J35_02485
DNA repair and recombination proteins [BR:
raz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U9J35_02485
MMR (mismatch excision repair)
Other MMR factors
U9J35_02485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_12
AAA_30
AAA_11
WH_KIN17
Motif
Other DBs
NCBI-ProteinID:
WRP07054
LinkDB
All DBs
Position
472766..475018
Genome browser
AA seq
750 aa
AA seq
DB search
MNKVLTNYSIYPYEAEKKEIPVAPLHKGETTKQLISSHEEDSFFFRTMEEAGIHLNASQI
EAVRHVEGPCLTLAGAGTGKTTVLVCRAGYLMTVKNIQPRNILLVTFTKKAAEEMKQRIS
SLPGTEAGGQVHASTFHALFLYLLRSRHYTQEVIGNERYKQIILKQIQREMKIYDPYDAE
TLLAKLSHYKLNQKDIRELPQKSKSEKEVRDILLKYEEWKRMNHKMDFDDILTEAYQLLL
SNPNLLTSLQHRFQYVMVDEFQDTNLVQYELMKLIAAHQNLFVVGDDDQTIYTFNGARNE
FILDFDEEFPDAKVVTLKENYRSDAYIIGLGNKVIGQNEHRRVKELIATKVEGQKPLYSR
PATADEEAVWITEEIHRLIGEGYTYGDMTILHRTMSSGRAVFEQLLLKEIPFTPYNQKDS
LFYENWTVKPVVDYLRLSMVPRNFSALESLLPTLFIRRDRGIAHILEEDRKERKKYPLIH
LTTLPGLKPFQVKNIKERMKFLKSIGDQSPEAAIKRIRKEFYHQYIDAQESHVVTEQKEL
IKEMLDELEGSAKRFDTISSFITFIDEMKAKYEEIYSNQNQKKNTNSVSLMTIHRSKGLE
FPVVFLIGAIEGNLPHSSALNANKLEDKVYKDPNQKEKALGAVEEERRLAYVAITRAKEK
LFISSPAYYQGEQRKCSRFIADLFTNTPHTDQPKINKKARSGKVTKILAWVCTNTKCIAW
QRPETHEDTESKVCPLCSSSMKLGEKEITE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaagtattaaccaactattctatttatccatatgaagcggaaaagaaggaaatc
ccggtagcaccactccataaaggggaaacgacgaaacagctgatatcctcccatgaagag
gattcttttttctttcggacgatggaggaagcaggcattcacttgaatgcttctcagata
gaggctgtgcgccatgtggaaggaccgtgcttaaccctggctggtgcagggactggaaag
acgacggtcctcgtttgccgggcaggctatttgatgacggtgaaaaatattcagccgaga
aatatattactcgtgacatttacaaagaaagcggcggaagaaatgaagcagcggatttca
agtctcccggggacggaagctggcggacaggttcatgccagcacgtttcatgccctgttt
ctttatttattgagatcccgccactacacacaagaagtgatcgggaacgagcgttataaa
caaatcatcttgaagcagatacagagagaaatgaagatatatgatccttatgatgcagag
acgctcctcgcaaaactctctcattataagttgaaccaaaaagatatcagggagcttcca
cagaaatccaagtcggaaaaagaagtgcgtgacattctcttaaaatatgaagagtggaag
cgaatgaatcataaaatggatttcgatgatattttgacagaggcatatcaattattactt
tcgaaccccaacctcttgacctctcttcagcatcgtttccagtacgtgatggtagatgaa
ttccaggatacgaatcttgtacaatatgaacttatgaagttaattgcggctcatcagaac
ttgtttgtagtaggggatgatgaccaaacgatctacacctttaacggcgccagaaatgaa
tttattttggattttgatgaagagttcccggatgcaaaggttgtaacgttgaaagagaat
taccggtcggatgcctatatcatcggattgggtaataaagtgatcggacagaatgaacac
cgccgtgttaaagagctcatcgccactaaagtggaagggcaaaagccgctttattccaga
ccggcaactgcagatgaagaggcagtttggatcacagaagaaatccatcggttaataggg
gaaggctacacgtacggggatatgacgattcttcaccgcacgatgagcagcgggcgtgca
gtctttgagcaactgctattaaaggagattcctttcacgccttataatcaaaaggattcc
ctcttctatgaaaactggacggtgaaaccggtggtggattacttgcggttatcgatggtt
ccaaggaacttttcagccctggaatcactgctgccgactctttttataagaagggaccgg
gggattgctcatattctggaggaagatcgtaaagagagaaagaaatatcctctcatccat
ttaaccactttaccaggattgaagccgtttcaggtaaagaatataaaagaacggatgaaa
tttctaaagtcgatcggagaccagtcaccggaggctgctatcaagcggatcaggaaagag
ttctatcatcaatacattgatgcccaggaatcacatgtggtaacagaacagaaggaactc
attaaagaaatgctggatgagctcgaaggatcggcgaagcgctttgatacgatttcgagt
tttattacctttattgatgagatgaaagcaaagtatgaagaaatctattcaaatcagaat
caaaagaagaacacaaacagcgtatcattaatgacgatacaccgttccaaaggcctggag
ttccccgtcgtgtttttaatcggcgcaattgaaggaaaccttccccatagctcagcactg
aatgccaataagcttgaagataaggtatacaaagatccgaatcagaaagaaaaggctttg
ggtgcagtagaggaagaaagacggctcgcgtatgtagccatcacgagggcaaaagagaaa
ttgtttatttcatctcctgcatattatcaaggtgaacaacggaaatgctcccgttttatt
gctgacttatttacgaacactccccacacggatcagccgaaaataaataaaaaggcgagg
agtgggaaggtgactaagattttggcctgggtttgcacaaataccaaatgcattgcctgg
cagagaccggaaacccatgaggatacggaatcaaaggtttgtcccttatgctcaagttca
atgaaactgggggaaaaggaaatcactgaataa
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