Rossellomorea aquimaris: U9J35_07910
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Entry
U9J35_07910 CDS
T09670
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
raz
Rossellomorea aquimaris
Brite
KEGG Orthology (KO) [BR:
raz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raz03400
]
U9J35_07910 (addB)
Enzymes [BR:
raz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U9J35_07910 (addB)
DNA repair and recombination proteins [BR:
raz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
U9J35_07910 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
WRP08067
LinkDB
All DBs
Position
1537811..1541296
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AA seq
1161 aa
AA seq
DB search
MAVRFILGRSGTGKTHRILDEMKQSLLEAPNGDPIIYIVPDQMSFISEYELVNTPGLNGM
IRGQVFSFTRLAWKILQETGGMSRYHLSDVGLNMMIRKIIDENKDHLHIFSKAADKPGFI
HHVESMLTEFKRYCISPRDLHQFDGEDERDSKVLKDKLHDLELIYEKFEEKLLGKYIDSE
DYFQLLADNVKNSELLRDAEIYIDGFHSFTPQEYLIIDQLIQHSKTVTVALTTDPEQQLG
AMNELSLYRMTNETYHTLQDICYGAGKSIEEEVLVKPIRYHNETMLHLERHFEDRPTVPC
EEAKGSIEFLEASNRRAEVEGIAREIRKLAREKGYRFKDIAVLVRNSQDYRDKVETIFQD
YSIPFFLDQKRTMLNHPLIELIRSTLEIMITNWRYEPVFRAVKTDLLFPYQKNPTDLREK
MDRLENYVLAYGIKGDRWTKKDRWKYRRFHGLEHVDAPQTDREKELEHEINELRLFISAP
IIRLGKRLKKQSTGREFCETLYLYLEELDIPAKLERMRIEAEEKGDLIAAREHDQAWSAV
MDLLDQYVEMLGDEETTMKKFSSILDAGMETMQFSLVPPAIDQVIIADLEKSRLGDIKAA
FIIGVNDGVLPAKMNEDGVLSDEDRESLINGGFKIAPSNRTKLLDEEFVAYKAFTTPSER
LFISYPIANEEGKALLPSSFIKRLNEMFPDANTKLLFNEPSELSEEEQLHYVCHPNVTIS
HLTSQLQMKKREYPIYDFWWDVYNFYATSNDWKWHSQHILSSLFYQNRANQLSEDTSRDL
YGDHILASVSRMELFHSCPFSHFASHGLKLRERDFFKLEAPDIGEMFHSALKWISEEVER
HGLTWASLSKAQCLKLAKEAVLMLAPKLQHQILLSSNRHYYIAQKLEQIISRASLILSEH
AKASGFVPVGVELGFGPHATLAPFQFQLRNGTKMELQGRIDRVDKAEDVSGVYLRIVDYK
SSARDLDMTEVYYGLALQMLTYLDIVLTNSKQFVGKEAKPAGVLYFHVHNPMINSKKILT
MDQIEKEIFKSFKMKGLVLGDSDIVRLMDQTLDTGNSDIISAGIKKDGSLSSRSKAASQE
DFHYMRQHVRKLYEASGNRIVSGETNITPYKLKDRTPCQFCSFRSVCQFDQSLEENEYRV
LPTAKPEDLLKKVREEVESNE
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacgttttattctcggacgctccggtacggggaaaacccatcgcatattagat
gagatgaagcagagcttattggaagcgccgaatggggatcccatcatctatatcgtgccg
gatcagatgtcatttatatcggaatacgagcttgtcaacacacccggattaaacgggatg
attcgtggacaagtgttcagcttcacacggctcgcgtggaagattcttcaggaaacgggc
ggaatgagccgctaccatctatcagatgtcggcttaaatatgatgattcggaagattatc
gacgaaaacaaagatcatctccatattttctcgaaggcagcggataagccgggtttcatc
catcatgtagaatccatgttgacggaattcaagcgctattgtatttcgccacgggatctc
caccaatttgatggggaagatgagcgggattcaaaggttttgaaggataagcttcatgat
cttgaactgatttatgagaaattcgaggagaagctccttggcaaatacattgattcagaa
gactattttcagctgttggcagataatgtgaaaaactctgaacttctaagagatgcagag
atttacatagacggcttccatagcttcacgccccaggaatatctgataatcgatcagctc
attcagcacagtaagacagtgacggttgcccttacaaccgatccggagcagcaattgggg
gcgatgaacgagttaagcttatatcggatgacgaacgaaacgtaccatacccttcaggat
atatgctatggagcggggaagtccatagaagaagaggtgttagtgaagccgattcgctat
cataatgaaacgatgctccatctcgaacgtcattttgaggaccggccgactgttccatgc
gaagaagcaaaaggctccattgagtttctggaagcttccaatcgccgggcagaggtcgaa
gggatagcaagagagatacggaagctagccagggaaaagggatatcgcttcaaagatata
gcggtgctcgttcgaaacagccaggactaccgtgataaggtcgaaacaatttttcaagat
tatagtattccatttttccttgatcagaagaggacaatgttaaatcatccattaattgag
ttgatccgttcgactctggaaattatgataacgaactggaggtatgagcctgtattccgg
gctgtgaaaacagacctgttgtttccttatcaaaaaaatccgaccgatttgcgggaaaaa
atggaccgtttggagaactatgtgttggcttacgggatcaaaggcgatcgctggacgaag
aaagatcgctggaagtaccgtcgtttccatggtcttgagcatgtggacgcaccgcaaacc
gaccgtgaaaaggaactcgagcatgagatcaatgagcttcgtttatttatttctgcgccg
atcatccgtctcggaaaacgattgaaaaagcaatccacgggacgggaattttgtgaaacc
ctctatctgtatctggaagagttggatattccggctaaacttgaacgtatgcgtattgaa
gcggaagaaaaaggcgacttgattgcggcaagggagcacgatcaagcttggtcagccgta
atggacttacttgatcaatatgtagagatgctcggcgatgaggaaacgacgatgaagaaa
ttctcgtcgatcctggatgcaggtatggaaacgatgcagttctcgttagtcccccctgcc
atcgatcaggtcattattgcagatcttgagaaatcaaggcttggggacattaaagcagct
ttcatcatcggagtgaacgatggtgtgctaccggcgaaaatgaatgaagacggagtcctg
tctgatgaagaccgtgaatcgttgatcaatgggggcttcaagatagctcccagtaatagg
acgaagctgctggacgaggagtttgtggcgtataaagcctttacgactccgagtgaacga
ttattcatcagctatcccatcgcgaatgaagaaggaaaagcgttattgccatcctctttc
atcaaaaggctgaatgaaatgtttccggatgcaaatacgaagcttctatttaatgaacca
tccgagctttctgaggaagagcagcttcattatgtgtgtcatcccaatgtgaccatttct
catttgacgtcgcaattacagatgaagaaacgggaatatccgatctatgatttctggtgg
gatgtgtataacttctatgcaacatcaaacgattggaaatggcattcacagcatatttta
tccagtctcttctaccagaatcgggcgaatcagctttctgaggatacgagcagggatctg
tatggtgatcatattttagcgagtgtatcccgaatggagctgttccatagctgtccgttt
tctcattttgccagtcatgggttgaagcttagagagcgggatttctttaaactggaggca
ccggatatcggggaaatgttccactcggctcttaaatggatatcagaagaagtggaacga
catggtctgacctgggcatctttatcaaaagcccagtgtctaaagcttgctaaagaagcc
gtcttgatgctcgcaccgaagcttcagcaccagattctattaagctcaaaccgccattat
tatattgctcagaagcttgagcagatcataagccgtgcaagcctaatcctcagtgagcat
gcgaaggcaagcggatttgtgcccgtcggggtggagcttgggttcggaccgcatgcgacc
ctggcgccgttccagttccagctgaggaatggaacgaaaatggagcttcagggaaggatc
gaccgggtagacaaagcagaagatgtaagtggagtatacctaaggatcgttgattacaaa
tcgagtgcaagagatctggatatgacggaagtgtactacggattggcacttcagatgctg
acgtatttagacattgtgttaacgaactctaagcaatttgtcgggaaagaagcaaagcct
gcaggcgtactctatttccacgttcacaatcccatgattaatagtaagaaaatcttgacg
atggatcagattgaaaaggaaatttttaagagctttaaaatgaagggactcgtgctggga
gactctgacatcgttcgattaatggatcaaacattggatacggggaactcagatatcatc
tctgccgggatcaagaaggatggatcattatcctcccgttcgaaggctgcttcacaggaa
gacttccactatatgcgccagcatgtgagaaagctctacgaagcgtcagggaaccggatc
gtttcgggtgagaccaatattactccttacaagctgaaggaccgtacaccatgtcagttc
tgttcgttccgttccgtttgtcaattcgatcaatctcttgaagaaaacgagtacagagtg
ctcccgacggcaaaaccagaagatctattaaagaaagtgagagaggaggtagagtccaat
gagtaa
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